Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246188
Identifier: 154246188
GI number: 154246188
Start: 2506990
End: 2507427
Strand: Reverse
Name: 154246188
Synonym: Xaut_2246
Alternate gene names: NA
Gene position: 2507427-2506990 (Counterclockwise)
Preceding gene: 154246189
Following gene: 154246182
Centisome position: 47.23
GC content: 57.31
Gene sequence:
>438_bases ATGGTAAATTGCCGCGTCTACATCGCCGCACCACTCTTCAATAATGCCGAACGCGCATTTAATGAGGCTCTCGCGAATGC CTTGCGCCCTAGGGTCGACGTATACCTGCCTCAGATGGATGGAATTCTGCTGCAGGAGGCGATCGCCAACGGCGAGAACC CTGAGATAGCATCGGAGCGCGTCTTTCAAGAAGACATAAGGGCGCTCCGCGAATGCGGTGCGCTACTCATCGTGCTTAAC GGGCGAACGATCGACGAAGGAGCCGCGTTCGAGCTTGGGGTCGCATGGTCCCTAGGCAAGCAATGCGTTGCCTACAAAGA CGACCCGCGGCAGTTGCTTTCAGTCGGTGACAATCCGATGATTATGCGGGCAGTGACCAGGGTCTTATGCAATTTCGACG ATGTCCAGGCTTGGGCCGCCAGCCTCCGTGCCCCTTGA
Upstream 100 bases:
>100_bases AACGGCGATGATCCTCGTCGCAATGGGCGCAAATCTCGCCCGCAGAAATGCCCACCCCTGAATTTCCAAACGGGCTCTTA GGCGGACGAGGCGCGCTCTA
Downstream 100 bases:
>100_bases CCCCGCCCACTTACCACTCAGCGCGAAGCTTCCGGCAAGAATCCGGGACTGCCCGCGGCAGTGTCTGCTTTCTGGACAAA TGCCAAGGCCCGGTCCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MVNCRVYIAAPLFNNAERAFNEALANALRPRVDVYLPQMDGILLQEAIANGENPEIASERVFQEDIRALRECGALLIVLN GRTIDEGAAFELGVAWSLGKQCVAYKDDPRQLLSVGDNPMIMRAVTRVLCNFDDVQAWAASLRAP
Sequences:
>Translated_145_residues MVNCRVYIAAPLFNNAERAFNEALANALRPRVDVYLPQMDGILLQEAIANGENPEIASERVFQEDIRALRECGALLIVLN GRTIDEGAAFELGVAWSLGKQCVAYKDDPRQLLSVGDNPMIMRAVTRVLCNFDDVQAWAASLRAP >Mature_145_residues MVNCRVYIAAPLFNNAERAFNEALANALRPRVDVYLPQMDGILLQEAIANGENPEIASERVFQEDIRALRECGALLIVLN GRTIDEGAAFELGVAWSLGKQCVAYKDDPRQLLSVGDNPMIMRAVTRVLCNFDDVQAWAASLRAP
Specific function: Unknown
COG id: COG3613
COG function: function code F; Nucleoside 2-deoxyribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16006; Mature: 16006
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNCRVYIAAPLFNNAERAFNEALANALRPRVDVYLPQMDGILLQEAIANGENPEIASER CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCCHHHHH VFQEDIRALRECGALLIVLNGRTIDEGAAFELGVAWSLGKQCVAYKDDPRQLLSVGDNPM HHHHHHHHHHHCCEEEEEECCCEECCCCCEEEEHHHHHCCCCCCCCCCHHHHHHCCCCCH IMRAVTRVLCNFDDVQAWAASLRAP HHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MVNCRVYIAAPLFNNAERAFNEALANALRPRVDVYLPQMDGILLQEAIANGENPEIASER CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCCHHHHH VFQEDIRALRECGALLIVLNGRTIDEGAAFELGVAWSLGKQCVAYKDDPRQLLSVGDNPM HHHHHHHHHHHCCEEEEEECCCEECCCCCEEEEHHHHHCCCCCCCCCCHHHHHHCCCCCH IMRAVTRVLCNFDDVQAWAASLRAP HHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA