Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246180
Identifier: 154246180
GI number: 154246180
Start: 2498710
End: 2499372
Strand: Direct
Name: 154246180
Synonym: Xaut_2238
Alternate gene names: NA
Gene position: 2498710-2499372 (Clockwise)
Preceding gene: 154246179
Following gene: 154246181
Centisome position: 47.07
GC content: 59.88
Gene sequence:
>663_bases ATGTCTCGTCTTACCCCCTTCGCTTCTAGGTTCGATCGACAGGCCGCCAAGCAGGTTCTCAGCGGCTACGGCAGCTGGGT CGAGGACCACATCGCCCATGGCTACACGGCCTATCTCGTGACTTTCATGTTTGATCGCCTTCCTGCTTCAACTCAAGCCG GGCGTATAGCCGGCATGCTTGATGCGGTGGAGACGGTGTACGCGCGGCTGATACAGTGGTTCGCCAGCCATCCCAACAGG CCGTCCCAGCGCCGGTACCTGCCGCATCTTATTTGCTCGCCTGATCTGCCGGTGTTCAAGCACGACAAGATGGCCTTGGT CGATGTTCAATCCAACGATGGCCTGCACGTGCATGGCATGCTCATGACGCCGCCGGTGTCCCGCTTCAAGTTCGAGCTGG TTTCGTGGATCGATGACAATGTGGGTCGTCTCATCCATGGCACGCCGATAAGGCGCCTTCATATTGTCGAGGTTGATCGC ACGCCGGGGTACGCCGCAGAGTATGCCTTGAAGGCCAGCGGTACCCGGATCGATGCCGACACTCTGCTGATCTTGCCGAA GGCCTTGTCCGAGCGCTCTGACAAAACAGCTAAGGGTTACGATGAGGCCGTGCGAACCGTGCGGGGCGCCTCATTGATGC GGAGCGGCCGGCCGCCGATCTGA
Upstream 100 bases:
>100_bases TATCGCAATCGGGCCTGATGATATCCAGCATAAATGTAGCGGACTGCGCCAATAATCAATTCTGTAAATCACATGCGTAC TCTCTTTCTGAGGTTTACGC
Downstream 100 bases:
>100_bases CAAAGCGAGCAGGTTCCGGGCTGGCGCTTAAAGCTCCACTCTCGTCAACACACGACAAAACGGTAACCCGAAAATTCAAA GCAGCATCGTGCTTGCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSRLTPFASRFDRQAAKQVLSGYGSWVEDHIAHGYTAYLVTFMFDRLPASTQAGRIAGMLDAVETVYARLIQWFASHPNR PSQRRYLPHLICSPDLPVFKHDKMALVDVQSNDGLHVHGMLMTPPVSRFKFELVSWIDDNVGRLIHGTPIRRLHIVEVDR TPGYAAEYALKASGTRIDADTLLILPKALSERSDKTAKGYDEAVRTVRGASLMRSGRPPI
Sequences:
>Translated_220_residues MSRLTPFASRFDRQAAKQVLSGYGSWVEDHIAHGYTAYLVTFMFDRLPASTQAGRIAGMLDAVETVYARLIQWFASHPNR PSQRRYLPHLICSPDLPVFKHDKMALVDVQSNDGLHVHGMLMTPPVSRFKFELVSWIDDNVGRLIHGTPIRRLHIVEVDR TPGYAAEYALKASGTRIDADTLLILPKALSERSDKTAKGYDEAVRTVRGASLMRSGRPPI >Mature_219_residues SRLTPFASRFDRQAAKQVLSGYGSWVEDHIAHGYTAYLVTFMFDRLPASTQAGRIAGMLDAVETVYARLIQWFASHPNRP SQRRYLPHLICSPDLPVFKHDKMALVDVQSNDGLHVHGMLMTPPVSRFKFELVSWIDDNVGRLIHGTPIRRLHIVEVDRT PGYAAEYALKASGTRIDADTLLILPKALSERSDKTAKGYDEAVRTVRGASLMRSGRPPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24671; Mature: 24539
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLTPFASRFDRQAAKQVLSGYGSWVEDHIAHGYTAYLVTFMFDRLPASTQAGRIAGML CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHH DAVETVYARLIQWFASHPNRPSQRRYLPHLICSPDLPVFKHDKMALVDVQSNDGLHVHGM HHHHHHHHHHHHHHHCCCCCCCHHCCCCCEECCCCCCCEECCCEEEEEEECCCCEEEEEE LMTPPVSRFKFELVSWIDDNVGRLIHGTPIRRLHIVEVDRTPGYAAEYALKASGTRIDAD EECCCHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEECCCCCHHHHHEECCCCCEECCC TLLILPKALSERSDKTAKGYDEAVRTVRGASLMRSGRPPI CEEEECHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SRLTPFASRFDRQAAKQVLSGYGSWVEDHIAHGYTAYLVTFMFDRLPASTQAGRIAGML CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHH DAVETVYARLIQWFASHPNRPSQRRYLPHLICSPDLPVFKHDKMALVDVQSNDGLHVHGM HHHHHHHHHHHHHHHCCCCCCCHHCCCCCEECCCCCCCEECCCEEEEEEECCCCEEEEEE LMTPPVSRFKFELVSWIDDNVGRLIHGTPIRRLHIVEVDRTPGYAAEYALKASGTRIDAD EECCCHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEECCCCCHHHHHEECCCCCEECCC TLLILPKALSERSDKTAKGYDEAVRTVRGASLMRSGRPPI CEEEECHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA