Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246175
Identifier: 154246175
GI number: 154246175
Start: 2493413
End: 2494282
Strand: Reverse
Name: 154246175
Synonym: Xaut_2232
Alternate gene names: NA
Gene position: 2494282-2493413 (Counterclockwise)
Preceding gene: 154246178
Following gene: 154246174
Centisome position: 46.98
GC content: 71.15
Gene sequence:
>870_bases TTGCGCAGCGCAGGGACGGCTTTTCTCGCCATCGCAGCAACCGTGGCCGCCCTCGCGGGCGCCGCCGGAGCGGAGCCGGC CGCGTCGGTCACCGTCTGCGTGCCAGCTGAGCCGGGCAGCCAGGAAGGTGCTTCCGGCCTTGGCGCCGCATGGACCGATA CAGGCGCGCTCCTGCTGGCCGACGGACGGCGGTTCATGCCCGAAGGCATCGCCCTGCCCTCGCGGCTCGCCAGCGATGCG GCGCTCCCCAGCGCGGCCGAACGCGCGGCGCGCACCACCCTCGATACCTGTCTCGTGCGGCCCGGCGCCGGGCACATGGA CAGGCATGGCCGCTTGTCGGCGGCCGGCTGGCTGGCCTGTCCGGCGCGAAACGGTGCGGTGGAGGAAGATCTCGCCACGG CGCTGCTGCGCGCAGGCGCCGGCTATGCCCAGCCAACAGCACAGGATAACGGTTGCCTGGCCCCGCGGCTGGCTGCGGAG ACGGAAGCACGGACAGCCCGGCGCGGCATCTGGGCCGAGCCGTCGGCCGTGGCGCCCGCCGCGAACGAGGATGCCATGGC CATCCGCTCGGGCCTGTTCACCGTAGCAGAAGGGCGTGTGCTCGCCGCCGGCGGGACGCGGGACCGGATTTTTATCAATT TCGGGTCAAGCTGGCGGCAAGATTTCACTGCGATGATGGAAAGGGAGGATTTCGCCACAATCATGGGCGATAGCCTTGAA CCAGCCATGTTGCGCGGCACCATGTTGCAGGTGCGCGGTGTGGTGCGCGCAGAAGGGGGGCCTGCCATCATGCTGCGGCG GCCGGGCGAGATCGCCCTTCTGGCCGGCGCGCAGGCGCCGGTAACGCGCGCAAGGCGCGGTGGCGAGTGA
Upstream 100 bases:
>100_bases CGCCCCCATGGGCTATCGTTGAGACATGCAGTTGCGCACCAACGACACCCGCCTCGCCCGCAGCCGCGCGCAGGCACCAG ACGCATGGCGGGGATGGGGT
Downstream 100 bases:
>100_bases CACAAGTGCATGAGGTTTCGGTGCGGGACGTGAGGCAACAACGGCCAGGCGACAGGACGGAGCGGGCGACGCAGCCGGCG GCCGGGCGCGCCACATGCCG
Product: SNase-like nuclease
Products: NA
Alternate protein names: SNase-Like Nuclease
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MRSAGTAFLAIAATVAALAGAAGAEPAASVTVCVPAEPGSQEGASGLGAAWTDTGALLLADGRRFMPEGIALPSRLASDA ALPSAAERAARTTLDTCLVRPGAGHMDRHGRLSAAGWLACPARNGAVEEDLATALLRAGAGYAQPTAQDNGCLAPRLAAE TEARTARRGIWAEPSAVAPAANEDAMAIRSGLFTVAEGRVLAAGGTRDRIFINFGSSWRQDFTAMMEREDFATIMGDSLE PAMLRGTMLQVRGVVRAEGGPAIMLRRPGEIALLAGAQAPVTRARRGGE
Sequences:
>Translated_289_residues MRSAGTAFLAIAATVAALAGAAGAEPAASVTVCVPAEPGSQEGASGLGAAWTDTGALLLADGRRFMPEGIALPSRLASDA ALPSAAERAARTTLDTCLVRPGAGHMDRHGRLSAAGWLACPARNGAVEEDLATALLRAGAGYAQPTAQDNGCLAPRLAAE TEARTARRGIWAEPSAVAPAANEDAMAIRSGLFTVAEGRVLAAGGTRDRIFINFGSSWRQDFTAMMEREDFATIMGDSLE PAMLRGTMLQVRGVVRAEGGPAIMLRRPGEIALLAGAQAPVTRARRGGE >Mature_289_residues MRSAGTAFLAIAATVAALAGAAGAEPAASVTVCVPAEPGSQEGASGLGAAWTDTGALLLADGRRFMPEGIALPSRLASDA ALPSAAERAARTTLDTCLVRPGAGHMDRHGRLSAAGWLACPARNGAVEEDLATALLRAGAGYAQPTAQDNGCLAPRLAAE TEARTARRGIWAEPSAVAPAANEDAMAIRSGLFTVAEGRVLAAGGTRDRIFINFGSSWRQDFTAMMEREDFATIMGDSLE PAMLRGTMLQVRGVVRAEGGPAIMLRRPGEIALLAGAQAPVTRARRGGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29602; Mature: 29602
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAGTAFLAIAATVAALAGAAGAEPAASVTVCVPAEPGSQEGASGLGAAWTDTGALLLA CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCEEEEE DGRRFMPEGIALPSRLASDAALPSAAERAARTTLDTCLVRPGAGHMDRHGRLSAAGWLAC CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEC PARNGAVEEDLATALLRAGAGYAQPTAQDNGCLAPRLAAETEARTARRGIWAEPSAVAPA CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC ANEDAMAIRSGLFTVAEGRVLAAGGTRDRIFINFGSSWRQDFTAMMEREDFATIMGDSLE CCCCHHHHHHCCEEEECCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC PAMLRGTMLQVRGVVRAEGGPAIMLRRPGEIALLAGAQAPVTRARRGGE HHHHHHHHHHHHHEEEECCCCEEEEECCCCEEEEECCCCCHHHHHCCCC >Mature Secondary Structure MRSAGTAFLAIAATVAALAGAAGAEPAASVTVCVPAEPGSQEGASGLGAAWTDTGALLLA CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCEEEEE DGRRFMPEGIALPSRLASDAALPSAAERAARTTLDTCLVRPGAGHMDRHGRLSAAGWLAC CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEC PARNGAVEEDLATALLRAGAGYAQPTAQDNGCLAPRLAAETEARTARRGIWAEPSAVAPA CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC ANEDAMAIRSGLFTVAEGRVLAAGGTRDRIFINFGSSWRQDFTAMMEREDFATIMGDSLE CCCCHHHHHHCCEEEECCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC PAMLRGTMLQVRGVVRAEGGPAIMLRRPGEIALLAGAQAPVTRARRGGE HHHHHHHHHHHHHEEEECCCCEEEEECCCCEEEEECCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA