Click here to switch to the map view.

The map label for this gene is xpsE [H]

Identifier: 154246050

GI number: 154246050

Start: 2367137

End: 2368957

Strand: Direct

Name: xpsE [H]

Synonym: Xaut_2107

Alternate gene names: 154246050

Gene position: 2367137-2368957 (Clockwise)

Preceding gene: 154246046

Following gene: 154246051

Centisome position: 44.59

GC content: 71.28

Gene sequence:

>1821_bases
ATGTCCGGCGCGTGTGAGCCCTGCCCGGCGGCAAGGATCAAGGTGAGGCGCGACGGGCGAGCCGAAACCGGCCGGCGCGC
CGTTCGGGCGACGGGGACGGGGATGACGGCCGACGGCGCCGGCGATTTGGTTGGCGATTTCATGGGCTATCTGGCGCGAT
GCGGGCTGCTGCGGCCGGGCGACGCCGTGCCTCTGCGCCCGGATGAGGTGCATTCGCCCGCCTCGTCCGCCACAAGCCCG
AAACCTTTGCGCAAGGTGTGGGAATCCACCGAGCTTGCCGCCGGCGATTTCGCCGATGCGGTGGCCACCTTCTATCGCCT
GCCGCGCGTGAGCCTGCCCGAGCTGATGGCGGCCCCCGCGTTGGTGTCACACTTCTCGCCGCGCTTCCTGCGCGAGATGA
CGGCGCTGCCCTATCGCGGCGCCGATGGCGTGGTGCGCCTCGCCGTGGGCGATCCCACCGACGGCGCAGTGCGGCGCGCC
GCCGAGATCGCCCTGGGCGAACAGGTGGCGCTGGTGGTCGCCTCCTTCGAGGACATCGCCACTGTCCTCACCGAGCGGCT
TGGCGGCGACGAGGCGCCAGCGGCGGGGATCACGGACACCGGCGGCGCGCGGGCCGATGACGACATCGACAGCCTGCGCG
ACCTCGCCTCGGGCGCGCCGGTGGTGCGCGCCGTCAACGACCTTCTGGAAAAGGCCATGGAGCTGCGCGCCAGCGACATC
CATATCGGCCCGTTCCGGGGGACCATCGAGGTGCGCATGCGCATCGACGGGCTGCTGCGGGTGGTGCCCGCGCCGGCCGA
CGTGCTGCCGCAGGCGGTGATCTCGCGCATCAAGATCCTCGCCGGCCTCGATATCGCCGAGCGCCGCCTGCCGCAGGACG
GCGCGGCGCGCCTGAAGCTCGGGCGCTCCGAGATCGACGTGCGCGTGGCGCTGATGCCCACCCAGCACGGCGAGGCGGCG
GTGATCCGCCTTCTCCCCCGCGACCGCGGCCTCCTGAACATGGACAAGCTCGGCCTGTCGCCGGGCGACGCAGACATCCT
CAAGCGCCTGCTGGCGCTGCCCCACGGCATGGTGGTGGTCACCGGTCCCACCGGATCGGGCAAGACCACGACGCTTGCCA
CCATCCTCTCCATCCTGAACGAGCCCACGCGCAAGATCCTCACCATCGAGGACCCGGTGGAATATGAGATCAAGGGCGTC
TACCAGTCGCAGGTGAAGCCCGCCATCGGGCTCACCTTCGCCGCTGCCCTGCGCTCCTTCCTGCGCCACGACCCAGACGT
GATCATGGTGGGCGAGGTGCGTGATCCCGAGACCGCGCACATCGCGGTCCATGCGGCGCTCACCGGCCATCTGGTGCTCA
CCACGCTCCACACTGACACGGCGGCCGCCTCGGTGCCGCGCCTGCTGGATCTGGGGGTGGAGGGCTTCCTGCTGAAGTCC
ACGTTGCGGGCGGTGATCGCCCAGCGCCTGGTGCGCCAGCTCTGCGACCGCTGCAAGCGCCCGCGCACCCTCACCGCCAC
CGACGTGGCCGACGATCCGCGCTTCTCGGCGCTGGGCTTTGCGGCGGGGGAGACCGTGTACGAGCCCAAGGGCTGCGAGC
GCTGCGGCGGGGCCGGCTATCGCGGCCGGGTGGGGGTGTTCGAGATCCTCACCCTGTCGGACGAGATCCGCGAGATGATC
GACCGCCACGCCGGCGCCAGCGCCGTGGACAAGGCGGCCATCGCCGGCGGCATGACCACCATGCTGGACGACGGCATCCT
GAAATGCCGGGCCGGCATCACCTCGCCGGCCGAGGTGCTGCGCGTGACCACCGTGCGCTGA

Upstream 100 bases:

>100_bases
ATGATGCGCCCGCCGACGCGAGCGTGCTCGGGCCGGACGGCTGCGCGTTCGATCAGGGATGCCTCGAAGGGCTCCCGCAC
AGAGGCTGTCGCGGGACGAA

Downstream 100 bases:

>100_bases
TGGCGACCTTCACCTACAGGGCCCTCACCCAGGCCGGACAGATCGTGAGCGGCGAGATCACCGCGCCCACCGAGGCGGAG
GTGCGCCGGCGCATCGAGTT

Product: type II secretion system protein E

Products: NA

Alternate protein names: Type II traffic warden ATPase [H]

Number of amino acids: Translated: 606; Mature: 605

Protein sequence:

>606_residues
MSGACEPCPAARIKVRRDGRAETGRRAVRATGTGMTADGAGDLVGDFMGYLARCGLLRPGDAVPLRPDEVHSPASSATSP
KPLRKVWESTELAAGDFADAVATFYRLPRVSLPELMAAPALVSHFSPRFLREMTALPYRGADGVVRLAVGDPTDGAVRRA
AEIALGEQVALVVASFEDIATVLTERLGGDEAPAAGITDTGGARADDDIDSLRDLASGAPVVRAVNDLLEKAMELRASDI
HIGPFRGTIEVRMRIDGLLRVVPAPADVLPQAVISRIKILAGLDIAERRLPQDGAARLKLGRSEIDVRVALMPTQHGEAA
VIRLLPRDRGLLNMDKLGLSPGDADILKRLLALPHGMVVVTGPTGSGKTTTLATILSILNEPTRKILTIEDPVEYEIKGV
YQSQVKPAIGLTFAAALRSFLRHDPDVIMVGEVRDPETAHIAVHAALTGHLVLTTLHTDTAAASVPRLLDLGVEGFLLKS
TLRAVIAQRLVRQLCDRCKRPRTLTATDVADDPRFSALGFAAGETVYEPKGCERCGGAGYRGRVGVFEILTLSDEIREMI
DRHAGASAVDKAAIAGGMTTMLDDGILKCRAGITSPAEVLRVTTVR

Sequences:

>Translated_606_residues
MSGACEPCPAARIKVRRDGRAETGRRAVRATGTGMTADGAGDLVGDFMGYLARCGLLRPGDAVPLRPDEVHSPASSATSP
KPLRKVWESTELAAGDFADAVATFYRLPRVSLPELMAAPALVSHFSPRFLREMTALPYRGADGVVRLAVGDPTDGAVRRA
AEIALGEQVALVVASFEDIATVLTERLGGDEAPAAGITDTGGARADDDIDSLRDLASGAPVVRAVNDLLEKAMELRASDI
HIGPFRGTIEVRMRIDGLLRVVPAPADVLPQAVISRIKILAGLDIAERRLPQDGAARLKLGRSEIDVRVALMPTQHGEAA
VIRLLPRDRGLLNMDKLGLSPGDADILKRLLALPHGMVVVTGPTGSGKTTTLATILSILNEPTRKILTIEDPVEYEIKGV
YQSQVKPAIGLTFAAALRSFLRHDPDVIMVGEVRDPETAHIAVHAALTGHLVLTTLHTDTAAASVPRLLDLGVEGFLLKS
TLRAVIAQRLVRQLCDRCKRPRTLTATDVADDPRFSALGFAAGETVYEPKGCERCGGAGYRGRVGVFEILTLSDEIREMI
DRHAGASAVDKAAIAGGMTTMLDDGILKCRAGITSPAEVLRVTTVR
>Mature_605_residues
SGACEPCPAARIKVRRDGRAETGRRAVRATGTGMTADGAGDLVGDFMGYLARCGLLRPGDAVPLRPDEVHSPASSATSPK
PLRKVWESTELAAGDFADAVATFYRLPRVSLPELMAAPALVSHFSPRFLREMTALPYRGADGVVRLAVGDPTDGAVRRAA
EIALGEQVALVVASFEDIATVLTERLGGDEAPAAGITDTGGARADDDIDSLRDLASGAPVVRAVNDLLEKAMELRASDIH
IGPFRGTIEVRMRIDGLLRVVPAPADVLPQAVISRIKILAGLDIAERRLPQDGAARLKLGRSEIDVRVALMPTQHGEAAV
IRLLPRDRGLLNMDKLGLSPGDADILKRLLALPHGMVVVTGPTGSGKTTTLATILSILNEPTRKILTIEDPVEYEIKGVY
QSQVKPAIGLTFAAALRSFLRHDPDVIMVGEVRDPETAHIAVHAALTGHLVLTTLHTDTAAASVPRLLDLGVEGFLLKST
LRAVIAQRLVRQLCDRCKRPRTLTATDVADDPRFSALGFAAGETVYEPKGCERCGGAGYRGRVGVFEILTLSDEIREMID
RHAGASAVDKAAIAGGMTTMLDDGILKCRAGITSPAEVLRVTTVR

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=388, Percent_Identity=47.1649484536082, Blast_Score=362, Evalue=1e-101,
Organism=Escherichia coli, GI1786296, Length=377, Percent_Identity=42.4403183023873, Blast_Score=286, Evalue=3e-78,
Organism=Escherichia coli, GI87082188, Length=219, Percent_Identity=42.0091324200913, Blast_Score=122, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR007831
- InterPro:   IPR013369
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 64392; Mature: 64261

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGACEPCPAARIKVRRDGRAETGRRAVRATGTGMTADGAGDLVGDFMGYLARCGLLRPG
CCCCCCCCCCCEEEEECCCCCHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
DAVPLRPDEVHSPASSATSPKPLRKVWESTELAAGDFADAVATFYRLPRVSLPELMAAPA
CCCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
LVSHFSPRFLREMTALPYRGADGVVRLAVGDPTDGAVRRAAEIALGEQVALVVASFEDIA
HHHHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
TVLTERLGGDEAPAAGITDTGGARADDDIDSLRDLASGAPVVRAVNDLLEKAMELRASDI
HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCE
HIGPFRGTIEVRMRIDGLLRVVPAPADVLPQAVISRIKILAGLDIAERRLPQDGAARLKL
EECCCCCEEEEEEEECCHHEECCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHEE
GRSEIDVRVALMPTQHGEAAVIRLLPRDRGLLNMDKLGLSPGDADILKRLLALPHGMVVV
CCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCEEEE
TGPTGSGKTTTLATILSILNEPTRKILTIEDPVEYEIKGVYQSQVKPAIGLTFAAALRSF
ECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
LRHDPDVIMVGEVRDPETAHIAVHAALTGHLVLTTLHTDTAAASVPRLLDLGVEGFLLKS
HHCCCCEEEEECCCCCCCEEEEEEEEEECEEEEEEEECCHHHHHHHHHHHCCCCHHHHHH
TLRAVIAQRLVRQLCDRCKRPRTLTATDVADDPRFSALGFAAGETVYEPKGCERCGGAGY
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHCCCCCCCCCCCCCCHHCCCCCC
RGRVGVFEILTLSDEIREMIDRHAGASAVDKAAIAGGMTTMLDDGILKCRAGITSPAEVL
CCCCCHHHEEHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCHHHHHCCCCCHHHHH
RVTTVR
EEECCC
>Mature Secondary Structure 
SGACEPCPAARIKVRRDGRAETGRRAVRATGTGMTADGAGDLVGDFMGYLARCGLLRPG
CCCCCCCCCCEEEEECCCCCHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
DAVPLRPDEVHSPASSATSPKPLRKVWESTELAAGDFADAVATFYRLPRVSLPELMAAPA
CCCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
LVSHFSPRFLREMTALPYRGADGVVRLAVGDPTDGAVRRAAEIALGEQVALVVASFEDIA
HHHHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
TVLTERLGGDEAPAAGITDTGGARADDDIDSLRDLASGAPVVRAVNDLLEKAMELRASDI
HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCE
HIGPFRGTIEVRMRIDGLLRVVPAPADVLPQAVISRIKILAGLDIAERRLPQDGAARLKL
EECCCCCEEEEEEEECCHHEECCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHEE
GRSEIDVRVALMPTQHGEAAVIRLLPRDRGLLNMDKLGLSPGDADILKRLLALPHGMVVV
CCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCEEEE
TGPTGSGKTTTLATILSILNEPTRKILTIEDPVEYEIKGVYQSQVKPAIGLTFAAALRSF
ECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
LRHDPDVIMVGEVRDPETAHIAVHAALTGHLVLTTLHTDTAAASVPRLLDLGVEGFLLKS
HHCCCCEEEEECCCCCCCEEEEEEEEEECEEEEEEEECCHHHHHHHHHHHCCCCHHHHHH
TLRAVIAQRLVRQLCDRCKRPRTLTATDVADDPRFSALGFAAGETVYEPKGCERCGGAGY
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHCCCCCCCCCCCCCCHHCCCCCC
RGRVGVFEILTLSDEIREMIDRHAGASAVDKAAIAGGMTTMLDDGILKCRAGITSPAEVL
CCCCCHHHEEHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCHHHHHCCCCCHHHHH
RVTTVR
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1944223; 12024217 [H]