Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154246007
Identifier: 154246007
GI number: 154246007
Start: 2321673
End: 2322221
Strand: Reverse
Name: 154246007
Synonym: Xaut_2064
Alternate gene names: NA
Gene position: 2322221-2321673 (Counterclockwise)
Preceding gene: 154246008
Following gene: 154246000
Centisome position: 43.74
GC content: 67.21
Gene sequence:
>549_bases ATGTCCTTCCCGTCCGACGGCATGACCCGTTTCACCACACTGAGCCGGCGCCTCCCGCGCGCGATGTCGCGCGGCCTGCG CCACGCTTTGCTCGTGCTGTGCGCGGCTGCACCGGCCGCAGCGCTGTTGCCGGATGCCGCCGCCGCCGAATTCCGCCTGT GCAACCGCACCCAGAGCCGGATCGGCATCGCCCTCGGCTACAAGGACGGCGACATCTGGACCACGGAAGGCTGGTGGAAC GTCTCGGCCAACAGCTGCGAGACCCTGCTGCGCGGCGAGTTGTCGGCCCGCTTTTATTACCTCTACGCCGTGGATTACGA CCAGGGCGGGGAATGGGCCGGCAAAGCCTACATGTGCACGCGGGAAAAGGAATTCACCATCAAGGCCGCTGACGACTGCC TCGCGCGCGGCTTCGACCGCACCGGCTTCTTCGAGGTGGACACGAAGGAGCAGAAGGCCTGGACCGTGCAGCTGACCGAA TCGAACCAGACCAAGCCGGCGCAGGCGAACGTGCCTCCTCCGCCGCCCCCGCCGCCAAGGCCTAGATAG
Upstream 100 bases:
>100_bases CGGCAGAAGGGGCAGCAACGGCGCAAGACCGGCCGCCAGATCGCCCATCCTCGCGCGGGCATTGACGGGCCGGCGGCTTA GAGGCACACACCATCGCGAC
Downstream 100 bases:
>100_bases GACCGCGCCGACCGGGATGGTCGGTGTCAGATCCCGCGGCCTTCCACCTTCAGCGACAGCTGGCTCTCCATCTCCTCGGT GCCGTCCAGGCGCGGATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSFPSDGMTRFTTLSRRLPRAMSRGLRHALLVLCAAAPAAALLPDAAAAEFRLCNRTQSRIGIALGYKDGDIWTTEGWWN VSANSCETLLRGELSARFYYLYAVDYDQGGEWAGKAYMCTREKEFTIKAADDCLARGFDRTGFFEVDTKEQKAWTVQLTE SNQTKPAQANVPPPPPPPPRPR
Sequences:
>Translated_182_residues MSFPSDGMTRFTTLSRRLPRAMSRGLRHALLVLCAAAPAAALLPDAAAAEFRLCNRTQSRIGIALGYKDGDIWTTEGWWN VSANSCETLLRGELSARFYYLYAVDYDQGGEWAGKAYMCTREKEFTIKAADDCLARGFDRTGFFEVDTKEQKAWTVQLTE SNQTKPAQANVPPPPPPPPRPR >Mature_181_residues SFPSDGMTRFTTLSRRLPRAMSRGLRHALLVLCAAAPAAALLPDAAAAEFRLCNRTQSRIGIALGYKDGDIWTTEGWWNV SANSCETLLRGELSARFYYLYAVDYDQGGEWAGKAYMCTREKEFTIKAADDCLARGFDRTGFFEVDTKEQKAWTVQLTES NQTKPAQANVPPPPPPPPRPR
Specific function: Unknown
COG id: COG5480
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20268; Mature: 20137
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPSDGMTRFTTLSRRLPRAMSRGLRHALLVLCAAAPAAALLPDAAAAEFRLCNRTQSR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCC IGIALGYKDGDIWTTEGWWNVSANSCETLLRGELSARFYYLYAVDYDQGGEWAGKAYMCT EEEEEECCCCCEEECCCEEECCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEEEEE REKEFTIKAADDCLARGFDRTGFFEVDTKEQKAWTVQLTESNQTKPAQANVPPPPPPPPR CCCCEEEEEHHHHHHCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC PR CC >Mature Secondary Structure SFPSDGMTRFTTLSRRLPRAMSRGLRHALLVLCAAAPAAALLPDAAAAEFRLCNRTQSR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCC IGIALGYKDGDIWTTEGWWNVSANSCETLLRGELSARFYYLYAVDYDQGGEWAGKAYMCT EEEEEECCCCCEEECCCEEECCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEEEEE REKEFTIKAADDCLARGFDRTGFFEVDTKEQKAWTVQLTESNQTKPAQANVPPPPPPPPR CCCCEEEEEHHHHHHCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC PR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA