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The map label for this gene is 154246006

Identifier: 154246006

GI number: 154246006

Start: 2320915

End: 2321646

Strand: Direct

Name: 154246006

Synonym: Xaut_2063

Alternate gene names: NA

Gene position: 2320915-2321646 (Clockwise)

Preceding gene: 154246005

Following gene: 154246009

Centisome position: 43.72

GC content: 69.4

Gene sequence:

>732_bases
ATGACCGAGGACACGCCGCCCATTCCCGCCCCTTGCGTCCGCGCTTCCCGCAGATGGAAGAGGCGCGCCCGGCCGGCCGC
GCTTCTTTTCTGTTTTCCCCTCATGATCACGCTGTCCACAGGTGCCGGAGCCCAATCCGTGCTGCCGGGAGAGCGGGTTC
CTGTGCCCCTGCCGGGCGTGCCGACGGGGCCGTCCGAGGCCCGTCCGCCGGCGGAGGCCGCGCCCGCCCGCCCGCGACTG
CCCAAGGACAAGCGCACCCAGCTCGAAGGGCTGTTCGCGGCGCTGAAGGTGGCGCCGGACGACCGCAGCTCCAAGATCAT
CGCTGACCGGCTGGACCAGCTGTTCTCCGATTCCGGCAGTCCGAGCGTCGACCTGCTGATGGCGCGCGCCGGCGCAGCCG
CCGAGGCCAAGGCATTTGACCTGGCGCTCCAGATCCTCGACCAGGTGATCGAGATCGAGCCTGACTATGTCGGCGCCCTC
AGCAAGCGCGCCACCATCCTCTATTTGCGCGACGACTATGGCGGCGCCCTCGCCGACATTCGCGAGGTGCTGGCCCGCGA
GCCGCGCCATTATTCCATGCTCTACGGCCTCGCCCTCATCATGCGCGAGCTGGGCGACGACAAGCGCGCATTGGAGGCGG
TGCGCATGGCCCGCGCCGTCAATCCGCGCCTGGACGGCACCGAGGAGATGGAGAGCCAGCTGTCGCTGAAGGTGGAAGGC
CGCGGGATCTGA

Upstream 100 bases:

>100_bases
AGCCGGTCGTCCCGCTGTCTCCCCGCATCGTGACCGCCCCGCCCGGCTTCTGGCCGGCGGGTGAGTTGACGCGATCCGCG
CATGGGCGGACACTTCAGCG

Downstream 100 bases:

>100_bases
CACCGACCATCCCGGTCGGCGCGGTCCTATCTAGGCCTTGGCGGCGGGGGCGGCGGAGGAGGCACGTTCGCCTGCGCCGG
CTTGGTCTGGTTCGATTCGG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTEDTPPIPAPCVRASRRWKRRARPAALLFCFPLMITLSTGAGAQSVLPGERVPVPLPGVPTGPSEARPPAEAAPARPRL
PKDKRTQLEGLFAALKVAPDDRSSKIIADRLDQLFSDSGSPSVDLLMARAGAAAEAKAFDLALQILDQVIEIEPDYVGAL
SKRATILYLRDDYGGALADIREVLAREPRHYSMLYGLALIMRELGDDKRALEAVRMARAVNPRLDGTEEMESQLSLKVEG
RGI

Sequences:

>Translated_243_residues
MTEDTPPIPAPCVRASRRWKRRARPAALLFCFPLMITLSTGAGAQSVLPGERVPVPLPGVPTGPSEARPPAEAAPARPRL
PKDKRTQLEGLFAALKVAPDDRSSKIIADRLDQLFSDSGSPSVDLLMARAGAAAEAKAFDLALQILDQVIEIEPDYVGAL
SKRATILYLRDDYGGALADIREVLAREPRHYSMLYGLALIMRELGDDKRALEAVRMARAVNPRLDGTEEMESQLSLKVEG
RGI
>Mature_242_residues
TEDTPPIPAPCVRASRRWKRRARPAALLFCFPLMITLSTGAGAQSVLPGERVPVPLPGVPTGPSEARPPAEAAPARPRLP
KDKRTQLEGLFAALKVAPDDRSSKIIADRLDQLFSDSGSPSVDLLMARAGAAAEAKAFDLALQILDQVIEIEPDYVGALS
KRATILYLRDDYGGALADIREVLAREPRHYSMLYGLALIMRELGDDKRALEAVRMARAVNPRLDGTEEMESQLSLKVEGR
GI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26404; Mature: 26273

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEDTPPIPAPCVRASRRWKRRARPAALLFCFPLMITLSTGAGAQSVLPGERVPVPLPGV
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PTGPSEARPPAEAAPARPRLPKDKRTQLEGLFAALKVAPDDRSSKIIADRLDQLFSDSGS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
PSVDLLMARAGAAAEAKAFDLALQILDQVIEIEPDYVGALSKRATILYLRDDYGGALADI
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEECCCCCHHHHH
REVLAREPRHYSMLYGLALIMRELGDDKRALEAVRMARAVNPRLDGTEEMESQLSLKVEG
HHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEECC
RGI
CCC
>Mature Secondary Structure 
TEDTPPIPAPCVRASRRWKRRARPAALLFCFPLMITLSTGAGAQSVLPGERVPVPLPGV
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PTGPSEARPPAEAAPARPRLPKDKRTQLEGLFAALKVAPDDRSSKIIADRLDQLFSDSGS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
PSVDLLMARAGAAAEAKAFDLALQILDQVIEIEPDYVGALSKRATILYLRDDYGGALADI
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEECCCCCHHHHH
REVLAREPRHYSMLYGLALIMRELGDDKRALEAVRMARAVNPRLDGTEEMESQLSLKVEG
HHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEECC
RGI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA