Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is ctpC [H]
Identifier: 154245955
GI number: 154245955
Start: 2269447
End: 2271336
Strand: Direct
Name: ctpC [H]
Synonym: Xaut_2012
Alternate gene names: 154245955
Gene position: 2269447-2271336 (Clockwise)
Preceding gene: 154245952
Following gene: 154245958
Centisome position: 42.75
GC content: 74.87
Gene sequence:
>1890_bases ATGCCCGGGGCGGCACGGACTGTGATGGGCGTCGGCCTGGCGCGCAACCGCTACCTCCTGCTCACGGCGGCCGTGCTGCC GCTGGTCACCGGCCTCGGCCTGCTGGTGGCGGGGCAGGATCGCGCGGCGTTCTTTGCCTTCGTGGCCGGCACCGTGCCGG TGCTCGCGGTGCTGGTGTTCGACATCGCGCGGGCGCTGGGGGAAGGCCGGTTCGGCCTCGACCTGCTGGCGGCCCTGTCC ATGGCCACGGCGCTGGCCTTCGGCGAGCCGCTGGCGGGTAACGTGGTCGCCCTGATGTATGCCGGCGGCCAGCAACTGGA GCGCTTCGCCGAGGGCCGCGCCCGGAGGGAGATGACCGCGCTCGCCGCCCGCGCCCCCCGCTCGGCCCTGCTGCGGGAGG GCGACACGCTCCGGGAGGTGCCCATCGGCGCGCTGAAGGCGGGCAACCTCATCGTGGTGCGGCAGGGCGACACGATCCCC GCCGACGGGCGCATCTGCGGCGGGCCGGCGGTGCTCGACCAGTCCTCCCTGACAGGTGAGGCGCACCCGGTGCGGCTGGA GGAGGGGGAGGAGGCGCCGTCGGGCGCCGTCAACGTGGGCGGCGCCTTCGACGTGCGGGTGCTCAGGTCCGCGGATGAGA GCACCTATGCGGCCATCGTGCGTCTTGTAGAGGCGGCGGCCGCCAGCCGCGCCCCCATGGCGCGCCTCGCCGATCGCTAT GCGCTCGGCTTCCTGGTGGTGTCGCTGGGGCTGGCGCTGGCTGCGGCGTTCCTCTCCGGCGATCCGCGCCGGGCTTTGGC GGTGCTGGTGGTGGCGACCCCGTGCCCGCTCATCCTCGCGGTGCCGGTGGCGCTCATGGCCGGCCTGTCGCGGGCCGCCA AACGCGGCGTGCTGGTGAAGAGCGGCGGCGCGCTGGAGAAGCTGGCCGCCGTGCGGGCGCTGGTGATCGACAAGACCGGG ACCCTCACCCACGGCAGGGCCCAGCTTCAGGAGATCCGCACCGCGCCGGACTTCGCCCCCGACGAGGTGTTGCGCCTTGC CGCCGCCCTCGACCAGGCCTCCAGCCATGTGGTGGCGGCGGCTCTGGTGGCGGCGGCCAAAGCCCGCGGCCTCGCCCTCG CCGTGCCGGAGGGCGTGGCGGAAGAGGGCGGCGTCGGTGTCACCGGGCGGGTGGAAGGCCGGGAGGTGGCCGTGGGCGGC TGCAGTTTCGTCGCGGCGCGGGCCACCAGCGACGGGGACGCCCTGCGTGCCTGCCTGCCGGCGGCGAGCGCGGTGGTCGC GGTCGGCATCGACGGATGCTTTGCCGGCCTGCTCATTCTCGCCGACCAGGTGCGGGACGATGCGGGGGAGATGGTGCGGG CCCTTCGGGCCGGCGGGGTGGACCACATCGTCCTCGCTTCGGGCGACCGCGCGGAAGCGGTGGAGGCGTTGGGCCGCAGC CTCGGCCTCGACAGCTGGGTGGGCGACCTTCAGCCCGGCGGCAAGGTCTCCCACGTCACCGATGCCCGTGCCCGCGCCCA TGCCCGGCGCGACTCGGGCACGGTGATGATGGTGGGCGACGGGGTCAACGACGCCCCGGCTTTGGCCGCTGCCGATGTGG GCGTGGCGCTGGGCGCGCGCGGCGCCGCCGCCTCTGCCGAGGTGGCGGACGTGGTGCTGCTGGTGGACCGGCTGGATCGG CTCGGCGAGGCCATGGCCATTGCCCGACGGGCGCTCGCCATCGCACGGCAGAGCGTGTTCGTGGGCATCGCCCTGTCGCT CATCGGCATGCTGGCGGCCGCCTTCGGCTTTCTGGAGCCGGTGGCCGGCGCCCTGCTGCAGGAGGCCATCGACGTGGCGG TGATCCTCAACGCCCTCCGGGTGCTGATCCCCGGGCCGGGGGAGGGGTGA
Upstream 100 bases:
>100_bases CCAAATTAGAATATTTCTAATATCAATAGACGAACGATATCCGCAACGGCAATGCGACCGCATGGCCAAACGCCGGATGG CTACCGGCGAGGAGAGATGC
Downstream 100 bases:
>100_bases GGGCGCACCCACCGGGCATTGCTTGAATAAAAAAAGGCCGATGGCATGAGGCATGAAAAAGCCGGCCGCCCCTTCGGACG GCCGGCCCTTTATCGGTCGC
Product: heavy metal translocating P-type ATPase
Products: ADP; Orthophosphate. [C]
Alternate protein names: NA
Number of amino acids: Translated: 629; Mature: 628
Protein sequence:
>629_residues MPGAARTVMGVGLARNRYLLLTAAVLPLVTGLGLLVAGQDRAAFFAFVAGTVPVLAVLVFDIARALGEGRFGLDLLAALS MATALAFGEPLAGNVVALMYAGGQQLERFAEGRARREMTALAARAPRSALLREGDTLREVPIGALKAGNLIVVRQGDTIP ADGRICGGPAVLDQSSLTGEAHPVRLEEGEEAPSGAVNVGGAFDVRVLRSADESTYAAIVRLVEAAAASRAPMARLADRY ALGFLVVSLGLALAAAFLSGDPRRALAVLVVATPCPLILAVPVALMAGLSRAAKRGVLVKSGGALEKLAAVRALVIDKTG TLTHGRAQLQEIRTAPDFAPDEVLRLAAALDQASSHVVAAALVAAAKARGLALAVPEGVAEEGGVGVTGRVEGREVAVGG CSFVAARATSDGDALRACLPAASAVVAVGIDGCFAGLLILADQVRDDAGEMVRALRAGGVDHIVLASGDRAEAVEALGRS LGLDSWVGDLQPGGKVSHVTDARARAHARRDSGTVMMVGDGVNDAPALAAADVGVALGARGAAASAEVADVVLLVDRLDR LGEAMAIARRALAIARQSVFVGIALSLIGMLAAAFGFLEPVAGALLQEAIDVAVILNALRVLIPGPGEG
Sequences:
>Translated_629_residues MPGAARTVMGVGLARNRYLLLTAAVLPLVTGLGLLVAGQDRAAFFAFVAGTVPVLAVLVFDIARALGEGRFGLDLLAALS MATALAFGEPLAGNVVALMYAGGQQLERFAEGRARREMTALAARAPRSALLREGDTLREVPIGALKAGNLIVVRQGDTIP ADGRICGGPAVLDQSSLTGEAHPVRLEEGEEAPSGAVNVGGAFDVRVLRSADESTYAAIVRLVEAAAASRAPMARLADRY ALGFLVVSLGLALAAAFLSGDPRRALAVLVVATPCPLILAVPVALMAGLSRAAKRGVLVKSGGALEKLAAVRALVIDKTG TLTHGRAQLQEIRTAPDFAPDEVLRLAAALDQASSHVVAAALVAAAKARGLALAVPEGVAEEGGVGVTGRVEGREVAVGG CSFVAARATSDGDALRACLPAASAVVAVGIDGCFAGLLILADQVRDDAGEMVRALRAGGVDHIVLASGDRAEAVEALGRS LGLDSWVGDLQPGGKVSHVTDARARAHARRDSGTVMMVGDGVNDAPALAAADVGVALGARGAAASAEVADVVLLVDRLDR LGEAMAIARRALAIARQSVFVGIALSLIGMLAAAFGFLEPVAGALLQEAIDVAVILNALRVLIPGPGEG >Mature_628_residues PGAARTVMGVGLARNRYLLLTAAVLPLVTGLGLLVAGQDRAAFFAFVAGTVPVLAVLVFDIARALGEGRFGLDLLAALSM ATALAFGEPLAGNVVALMYAGGQQLERFAEGRARREMTALAARAPRSALLREGDTLREVPIGALKAGNLIVVRQGDTIPA DGRICGGPAVLDQSSLTGEAHPVRLEEGEEAPSGAVNVGGAFDVRVLRSADESTYAAIVRLVEAAAASRAPMARLADRYA LGFLVVSLGLALAAAFLSGDPRRALAVLVVATPCPLILAVPVALMAGLSRAAKRGVLVKSGGALEKLAAVRALVIDKTGT LTHGRAQLQEIRTAPDFAPDEVLRLAAALDQASSHVVAAALVAAAKARGLALAVPEGVAEEGGVGVTGRVEGREVAVGGC SFVAARATSDGDALRACLPAASAVVAVGIDGCFAGLLILADQVRDDAGEMVRALRAGGVDHIVLASGDRAEAVEALGRSL GLDSWVGDLQPGGKVSHVTDARARAHARRDSGTVMMVGDGVNDAPALAAADVGVALGARGAAASAEVADVVLLVDRLDRL GEAMAIARRALAIARQSVFVGIALSLIGMLAAAFGFLEPVAGALLQEAIDVAVILNALRVLIPGPGEG
Specific function: Involved In Export Of Lead, Cadmium, Zinc And Mercury. [C]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily [H]
Homologues:
Organism=Homo sapiens, GI115529486, Length=663, Percent_Identity=26.0935143288084, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI55743071, Length=335, Percent_Identity=28.6567164179104, Blast_Score=125, Evalue=2e-28, Organism=Homo sapiens, GI55743073, Length=196, Percent_Identity=32.1428571428571, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI83700225, Length=238, Percent_Identity=26.0504201680672, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI4502271, Length=309, Percent_Identity=26.2135922330097, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI297374799, Length=244, Percent_Identity=25.4098360655738, Blast_Score=73, Evalue=9e-13, Organism=Homo sapiens, GI22748667, Length=301, Percent_Identity=24.9169435215947, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI153946397, Length=239, Percent_Identity=25.5230125523013, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI118498343, Length=254, Percent_Identity=25.5905511811024, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI237681111, Length=249, Percent_Identity=26.5060240963855, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI21361181, Length=249, Percent_Identity=26.5060240963855, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI237681109, Length=249, Percent_Identity=26.5060240963855, Blast_Score=67, Evalue=7e-11, Organism=Escherichia coli, GI1789879, Length=618, Percent_Identity=32.2006472491909, Blast_Score=217, Evalue=2e-57, Organism=Escherichia coli, GI1786691, Length=548, Percent_Identity=32.4817518248175, Blast_Score=206, Evalue=4e-54, Organism=Escherichia coli, GI1786914, Length=511, Percent_Identity=27.2015655577299, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI2367363, Length=287, Percent_Identity=29.2682926829268, Blast_Score=66, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17556548, Length=650, Percent_Identity=26.4615384615385, Blast_Score=148, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17559224, Length=248, Percent_Identity=25.4032258064516, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71997262, Length=254, Percent_Identity=27.5590551181102, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71997275, Length=254, Percent_Identity=27.5590551181102, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71997269, Length=254, Percent_Identity=27.5590551181102, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320475, Length=544, Percent_Identity=27.5735294117647, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6319772, Length=574, Percent_Identity=25.4355400696864, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6321430, Length=560, Percent_Identity=26.7857142857143, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6325221, Length=584, Percent_Identity=26.541095890411, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI221329854, Length=416, Percent_Identity=29.0865384615385, Blast_Score=129, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00702 Hydrolase [H]
EC number: 3.6.3.3 [C]
Molecular weight: Translated: 63610; Mature: 63478
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00154 ATPASE_E1_E2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGAARTVMGVGLARNRYLLLTAAVLPLVTGLGLLVAGQDRAAFFAFVAGTVPVLAVLVF CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHH DIARALGEGRFGLDLLAALSMATALAFGEPLAGNVVALMYAGGQQLERFAEGRARREMTA HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH LAARAPRSALLREGDTLREVPIGALKAGNLIVVRQGDTIPADGRICGGPAVLDQSSLTGE HHHHCCHHHHHHCCCCHHHCCCCEECCCCEEEEECCCCCCCCCEEECCCHHCCCCCCCCC AHPVRLEEGEEAPSGAVNVGGAFDVRVLRSADESTYAAIVRLVEAAAASRAPMARLADRY CCCEECCCCCCCCCCCEECCCCEEHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH ALGFLVVSLGLALAAAFLSGDPRRALAVLVVATPCPLILAVPVALMAGLSRAAKRGVLVK HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEE SGGALEKLAAVRALVIDKTGTLTHGRAQLQEIRTAPDFAPDEVLRLAAALDQASSHVVAA CCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ALVAAAKARGLALAVPEGVAEEGGVGVTGRVEGREVAVGGCSFVAARATSDGDALRACLP HHHHHHHHCCEEEECCCCCCCCCCCCEEEECCCCEEEECCCCEEEEECCCCHHHHHHHHH AASAVVAVGIDGCFAGLLILADQVRDDAGEMVRALRAGGVDHIVLASGDRAEAVEALGRS HHHHHEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH LGLDSWVGDLQPGGKVSHVTDARARAHARRDSGTVMMVGDGVNDAPALAAADVGVALGAR CCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCC GAAASAEVADVVLLVDRLDRLGEAMAIARRALAIARQSVFVGIALSLIGMLAAAFGFLEP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAGALLQEAIDVAVILNALRVLIPGPGEG HHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PGAARTVMGVGLARNRYLLLTAAVLPLVTGLGLLVAGQDRAAFFAFVAGTVPVLAVLVF CCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHH DIARALGEGRFGLDLLAALSMATALAFGEPLAGNVVALMYAGGQQLERFAEGRARREMTA HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH LAARAPRSALLREGDTLREVPIGALKAGNLIVVRQGDTIPADGRICGGPAVLDQSSLTGE HHHHCCHHHHHHCCCCHHHCCCCEECCCCEEEEECCCCCCCCCEEECCCHHCCCCCCCCC AHPVRLEEGEEAPSGAVNVGGAFDVRVLRSADESTYAAIVRLVEAAAASRAPMARLADRY CCCEECCCCCCCCCCCEECCCCEEHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH ALGFLVVSLGLALAAAFLSGDPRRALAVLVVATPCPLILAVPVALMAGLSRAAKRGVLVK HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEE SGGALEKLAAVRALVIDKTGTLTHGRAQLQEIRTAPDFAPDEVLRLAAALDQASSHVVAA CCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ALVAAAKARGLALAVPEGVAEEGGVGVTGRVEGREVAVGGCSFVAARATSDGDALRACLP HHHHHHHHCCEEEECCCCCCCCCCCCEEEECCCCEEEECCCCEEEEECCCCHHHHHHHHH AASAVVAVGIDGCFAGLLILADQVRDDAGEMVRALRAGGVDHIVLASGDRAEAVEALGRS HHHHHEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH LGLDSWVGDLQPGGKVSHVTDARARAHARRDSGTVMMVGDGVNDAPALAAADVGVALGAR CCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCC GAAASAEVADVVLLVDRLDRLGEAMAIARRALAIARQSVFVGIALSLIGMLAAAFGFLEP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAGALLQEAIDVAVILNALRVLIPGPGEG HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]