Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is ordL [H]
Identifier: 154245883
GI number: 154245883
Start: 2196407
End: 2197726
Strand: Direct
Name: ordL [H]
Synonym: Xaut_1940
Alternate gene names: 154245883
Gene position: 2196407-2197726 (Clockwise)
Preceding gene: 154245882
Following gene: 154245887
Centisome position: 41.37
GC content: 70.0
Gene sequence:
>1320_bases ATGGCAGGCGAGGCTCAATCCAGGCCGCCGACGGGGCTCGATCCCGCCGGGCACGCGCCGTCCTGGTACGCGGCGACGGC CATCGCCTGTCCCGCCTTTCCCGCGCTTGCGGGTGAGGTGAAGGCGGACGTGTGCATCCTCGGCGGTGGCTACACCGGTC TCTCCGCCGCGTTGCATCTGGCGGAAGCCGGCTTCGACGTAGTGGTGCTGGAGGCGGCGCGCGTCGGCTCGGGGGCTTCG GGCCGCAATGGCGGGCAGCTGCATTCCGGCCAGCGCCACGGCCAGGATGTGATCGAGAAGGCCGTGGGCCTCGACGACGC GAAGAAGCTGTGGGACCTCGCCGAGGAGGGCAAGGCGCTGGTCCATGGCCTGATCGCGCGCCACGGCATGGCGTGCGACC TGAAGAGCGGCCTCATCCATGCCGACCACAAGCCGCACTTCGTGAAGGAGAGCCACGACTACGCCCGCCTGCTGCGGGAC CGCTACGGCTATGACGCGGTCGACCCGCTGACCCGCGAGGAGATCCGCGCCCTGGTGGGCACCGATGCCTATCATGGCGG AGTGATCGACCGGAAAGCCGGCCATCTCCACCCGCTCAATTTCGCCCTTAGTCTCGCCAGGGCGGCGGCCGGGGCCGGCG CGCGGATCTTCGAGGGCACCCGCGCCGTGGCCGTGAAGGAGGAGGGGGCGGGGGTCACCGTCACCACCGCGGGCGGCGCC GTGGTGCGCGCCGGCTTCCTGCTGGAATGCGGCAACGGTCTCATGGACGGCTTCGACCGGCGGGTGGACACCCATGTCAT GCCCATCTGCAACTACATCATCGCCACCGAGCCTCTTGGGGCGCGGGCGCGGGAGATCATCGCCAATGACGCGGCGGTGG CGGATAGCCGCTTCGTCATCAATTATTTCCGCCTGAGCGGCGACGGCCGGCTGCTGTTCGGCGGCGGCGAGAGCTACCGG CGGGGTCTGCGGACCGACGTGGCCGGCTTCGTGCGGCCCTATATGCTGCGGATCTTCCCGCAGCTTCAGGACGTGCGCAT CGACTATGCCTGGGGCGGGGTGCTCGCCATCACCCTCAATCGCATGCCGTTCGTGCGCCGGCTGTCGGACAAGGTGCTGG TCTCGGCCGGCTACAGCGGGCAGGGGGTGGCGCTGGCACCCCTGTTCGGCAAGATCCTGGCCGAGGCGGTGAAGGGACAG CTGGAGCGCTTCGACCTGCTCCAGCGCCTGCCGGTGCCGCCGTTTCCCGGCGGCCGGCTCATGCGCTATCCGCTGCTGGT GGCGGGCCTCAGCTATTACGCCATGCGCGACCGGCTCTGA
Upstream 100 bases:
>100_bases CCGCCTATGCCGCGGTGAAGCAGGCCGAGTTCGAGACCTTCATGCGGGTGATCTCGCCGTGGGAGCGGGAATATCTGCTG CTGAACGTCTGAGCGCGCGC
Downstream 100 bases:
>100_bases CCTGAGCCGGTCCACCCCGCACCTGAAAAGCTCCGGTCGGGCTCAGTTCAGCCCGCCGAGCCGCCGCGCCTCGGCGAGGG CCTTGAGGCAGCCCGCCTCG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MAGEAQSRPPTGLDPAGHAPSWYAATAIACPAFPALAGEVKADVCILGGGYTGLSAALHLAEAGFDVVVLEAARVGSGAS GRNGGQLHSGQRHGQDVIEKAVGLDDAKKLWDLAEEGKALVHGLIARHGMACDLKSGLIHADHKPHFVKESHDYARLLRD RYGYDAVDPLTREEIRALVGTDAYHGGVIDRKAGHLHPLNFALSLARAAAGAGARIFEGTRAVAVKEEGAGVTVTTAGGA VVRAGFLLECGNGLMDGFDRRVDTHVMPICNYIIATEPLGARAREIIANDAAVADSRFVINYFRLSGDGRLLFGGGESYR RGLRTDVAGFVRPYMLRIFPQLQDVRIDYAWGGVLAITLNRMPFVRRLSDKVLVSAGYSGQGVALAPLFGKILAEAVKGQ LERFDLLQRLPVPPFPGGRLMRYPLLVAGLSYYAMRDRL
Sequences:
>Translated_439_residues MAGEAQSRPPTGLDPAGHAPSWYAATAIACPAFPALAGEVKADVCILGGGYTGLSAALHLAEAGFDVVVLEAARVGSGAS GRNGGQLHSGQRHGQDVIEKAVGLDDAKKLWDLAEEGKALVHGLIARHGMACDLKSGLIHADHKPHFVKESHDYARLLRD RYGYDAVDPLTREEIRALVGTDAYHGGVIDRKAGHLHPLNFALSLARAAAGAGARIFEGTRAVAVKEEGAGVTVTTAGGA VVRAGFLLECGNGLMDGFDRRVDTHVMPICNYIIATEPLGARAREIIANDAAVADSRFVINYFRLSGDGRLLFGGGESYR RGLRTDVAGFVRPYMLRIFPQLQDVRIDYAWGGVLAITLNRMPFVRRLSDKVLVSAGYSGQGVALAPLFGKILAEAVKGQ LERFDLLQRLPVPPFPGGRLMRYPLLVAGLSYYAMRDRL >Mature_438_residues AGEAQSRPPTGLDPAGHAPSWYAATAIACPAFPALAGEVKADVCILGGGYTGLSAALHLAEAGFDVVVLEAARVGSGASG RNGGQLHSGQRHGQDVIEKAVGLDDAKKLWDLAEEGKALVHGLIARHGMACDLKSGLIHADHKPHFVKESHDYARLLRDR YGYDAVDPLTREEIRALVGTDAYHGGVIDRKAGHLHPLNFALSLARAAAGAGARIFEGTRAVAVKEEGAGVTVTTAGGAV VRAGFLLECGNGLMDGFDRRVDTHVMPICNYIIATEPLGARAREIIANDAAVADSRFVINYFRLSGDGRLLFGGGESYRR GLRTDVAGFVRPYMLRIFPQLQDVRIDYAWGGVLAITLNRMPFVRRLSDKVLVSAGYSGQGVALAPLFGKILAEAVKGQL ERFDLLQRLPVPPFPGGRLMRYPLLVAGLSYYAMRDRL
Specific function: Unknown
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=427, Percent_Identity=40.7494145199063, Blast_Score=305, Evalue=5e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 46898; Mature: 46767
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGEAQSRPPTGLDPAGHAPSWYAATAIACPAFPALAGEVKADVCILGGGYTGLSAALHL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCEEEEECCHHHHHHHHHH AEAGFDVVVLEAARVGSGASGRNGGQLHSGQRHGQDVIEKAVGLDDAKKLWDLAEEGKAL HHCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH VHGLIARHGMACDLKSGLIHADHKPHFVKESHDYARLLRDRYGYDAVDPLTREEIRALVG HHHHHHHCCCCEECCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHC TDAYHGGVIDRKAGHLHPLNFALSLARAAAGAGARIFEGTRAVAVKEEGAGVTVTTAGGA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCEEEEECCCH VVRAGFLLECGNGLMDGFDRRVDTHVMPICNYIIATEPLGARAREIIANDAAVADSRFVI HHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCEEEE NYFRLSGDGRLLFGGGESYRRGLRTDVAGFVRPYMLRIFPQLQDVRIDYAWGGVLAITLN EEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCEEEEEEC RMPFVRRLSDKVLVSAGYSGQGVALAPLFGKILAEAVKGQLERFDLLQRLPVPPFPGGRL CCHHHHHCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH MRYPLLVAGLSYYAMRDRL HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGEAQSRPPTGLDPAGHAPSWYAATAIACPAFPALAGEVKADVCILGGGYTGLSAALHL CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCEEEEECCHHHHHHHHHH AEAGFDVVVLEAARVGSGASGRNGGQLHSGQRHGQDVIEKAVGLDDAKKLWDLAEEGKAL HHCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH VHGLIARHGMACDLKSGLIHADHKPHFVKESHDYARLLRDRYGYDAVDPLTREEIRALVG HHHHHHHCCCCEECCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHC TDAYHGGVIDRKAGHLHPLNFALSLARAAAGAGARIFEGTRAVAVKEEGAGVTVTTAGGA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCEEEEECCCH VVRAGFLLECGNGLMDGFDRRVDTHVMPICNYIIATEPLGARAREIIANDAAVADSRFVI HHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCEEEE NYFRLSGDGRLLFGGGESYRRGLRTDVAGFVRPYMLRIFPQLQDVRIDYAWGGVLAITLN EEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCEEEEEEC RMPFVRRLSDKVLVSAGYSGQGVALAPLFGKILAEAVKGQLERFDLLQRLPVPPFPGGRL CCHHHHHCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH MRYPLLVAGLSYYAMRDRL HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430; 10400573 [H]