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The map label for this gene is yrbH [C]

Identifier: 154245839

GI number: 154245839

Start: 2137176

End: 2138192

Strand: Direct

Name: yrbH [C]

Synonym: Xaut_1895

Alternate gene names: 154245839

Gene position: 2137176-2138192 (Clockwise)

Preceding gene: 154245835

Following gene: 154245846

Centisome position: 40.26

GC content: 69.81

Gene sequence:

>1017_bases
ATGATGCGTTCTCCGGCAAATAAAGTCCCGGCCGACGACGGGCCGCACGTGCATCCCGCCTCGGTGGTCTCCGCGCTTGC
AACCCTCGATGCGGAAAAGGCGGGCCTCGCGGCCCTGGCCGAAGCCATGGCAGGCCCTTTGGGCGCGGCCTTCGACGTGG
CGGTGGCCACCATCCAGAATTCCCACGGCCGGGTCATCGTCACCGGCATGGGCAAGAGCGGGCACGTGGCGCGCAAGATT
GCCGCGACGCTGGCCTCCACCGGCACGCCGGCCCATTATGTCCACCCCGCCGAGGCCAGTCACGGCGACCTCGGCATGAT
CACCACCGACGACGTGATCGTGGCCCTCTCCTGGTCCGGCGAGACGGTGGAACTGCACGATATCGTGGACTATTCGCGCC
GCTTCGACGTGCCACTCATCGCCTTCACCTCCAATACCGAGAGCGCGCTGGCTTCCAGCGCCAGCGTGGTGCTGAGCCTG
CCGGTGGCGCAGGAGGCCTGCCCCCACGGGCTCGCCCCCACCACCTCCACCCTCATGCAGCTGGCGCTGGGCGACGCGCT
GGCGGTGGCGCTGCTGCAGAGCCGGGGCTTCACCGCCCTGGATTTCCGCCAGTTCCATCCCGGCGGCAAGCTGGGCGCGA
GCCTGAAGTTCGTGCGCGACGTGATGCGCCAGGGCGATGCGGTGCCGGTGGTGGCGGCCGGCACCCTCATGGGCGCCGCG
CTGGTGGAGATGAGCACCAAGGGCCTCGGCTGCGTGGGCGTCGTGGGGCCGGACGGCGCGCTGACCGGCATCGTCACCGA
CGGCGACCTGCGCCGCCACATGGCCAACGACCTGCCAACCCGCACGGTGGACGAGATCATGACCGCCGCGCCCAAGACGG
TGCGGCCGGACCAGCTTGCCTCCGAGGCCCTCAACATCCTCAACAGCCGCAAGATCACGGCGTTGATGGTGGTGGAGGGC
CAGGCACCCGTGGGCGTGCTGCACATCCACGACCTGCTGCTGACCGGCATCGCCTGA

Upstream 100 bases:

>100_bases
CGCGGGAGAGGGAGCTTGGCCGGTTCTCTCCGCAACCGGGCGCTCGCCCCGTGGCGGGGCGTCTCTCCCCTTTGGCGGCG
ATCGGTGCTATCCAGTCGCG

Downstream 100 bases:

>100_bases
GGCTCGGGCTCAGGCCACCTGCGGCGCATCCCCCGGCCGCGTGGCGATCAGGTCGCGCAGGGTGAGGATGGTGGCGGCGT
CCGCCACCCCGTCCACCTTG

Product: KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MMRSPANKVPADDGPHVHPASVVSALATLDAEKAGLAALAEAMAGPLGAAFDVAVATIQNSHGRVIVTGMGKSGHVARKI
AATLASTGTPAHYVHPAEASHGDLGMITTDDVIVALSWSGETVELHDIVDYSRRFDVPLIAFTSNTESALASSASVVLSL
PVAQEACPHGLAPTTSTLMQLALGDALAVALLQSRGFTALDFRQFHPGGKLGASLKFVRDVMRQGDAVPVVAAGTLMGAA
LVEMSTKGLGCVGVVGPDGALTGIVTDGDLRRHMANDLPTRTVDEIMTAAPKTVRPDQLASEALNILNSRKITALMVVEG
QAPVGVLHIHDLLLTGIA

Sequences:

>Translated_338_residues
MMRSPANKVPADDGPHVHPASVVSALATLDAEKAGLAALAEAMAGPLGAAFDVAVATIQNSHGRVIVTGMGKSGHVARKI
AATLASTGTPAHYVHPAEASHGDLGMITTDDVIVALSWSGETVELHDIVDYSRRFDVPLIAFTSNTESALASSASVVLSL
PVAQEACPHGLAPTTSTLMQLALGDALAVALLQSRGFTALDFRQFHPGGKLGASLKFVRDVMRQGDAVPVVAAGTLMGAA
LVEMSTKGLGCVGVVGPDGALTGIVTDGDLRRHMANDLPTRTVDEIMTAAPKTVRPDQLASEALNILNSRKITALMVVEG
QAPVGVLHIHDLLLTGIA
>Mature_338_residues
MMRSPANKVPADDGPHVHPASVVSALATLDAEKAGLAALAEAMAGPLGAAFDVAVATIQNSHGRVIVTGMGKSGHVARKI
AATLASTGTPAHYVHPAEASHGDLGMITTDDVIVALSWSGETVELHDIVDYSRRFDVPLIAFTSNTESALASSASVVLSL
PVAQEACPHGLAPTTSTLMQLALGDALAVALLQSRGFTALDFRQFHPGGKLGASLKFVRDVMRQGDAVPVVAAGTLMGAA
LVEMSTKGLGCVGVVGPDGALTGIVTDGDLRRHMANDLPTRTVDEIMTAAPKTVRPDQLASEALNILNSRKITALMVVEG
QAPVGVLHIHDLLLTGIA

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=318, Percent_Identity=47.1698113207547, Blast_Score=265, Evalue=2e-72,
Organism=Escherichia coli, GI87082151, Length=294, Percent_Identity=44.8979591836735, Blast_Score=219, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34724; Mature: 34724

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRSPANKVPADDGPHVHPASVVSALATLDAEKAGLAALAEAMAGPLGAAFDVAVATIQN
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHEEEEEC
SHGRVIVTGMGKSGHVARKIAATLASTGTPAHYVHPAEASHGDLGMITTDDVIVALSWSG
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEECCEEEEEECCC
ETVELHDIVDYSRRFDVPLIAFTSNTESALASSASVVLSLPVAQEACPHGLAPTTSTLMQ
CEEEHHHHHHHHHHCCCEEEEEECCCHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHH
LALGDALAVALLQSRGFTALDFRQFHPGGKLGASLKFVRDVMRQGDAVPVVAAGTLMGAA
HHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHH
LVEMSTKGLGCVGVVGPDGALTGIVTDGDLRRHMANDLPTRTVDEIMTAAPKTVRPDQLA
HHHHHCCCCCEEEEECCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHH
SEALNILNSRKITALMVVEGQAPVGVLHIHDLLLTGIA
HHHHHHHCCCCEEEEEEEECCCCEEHHHHHHHHHHCCC
>Mature Secondary Structure
MMRSPANKVPADDGPHVHPASVVSALATLDAEKAGLAALAEAMAGPLGAAFDVAVATIQN
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHEEEEEC
SHGRVIVTGMGKSGHVARKIAATLASTGTPAHYVHPAEASHGDLGMITTDDVIVALSWSG
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEECCEEEEEECCC
ETVELHDIVDYSRRFDVPLIAFTSNTESALASSASVVLSLPVAQEACPHGLAPTTSTLMQ
CEEEHHHHHHHHHHCCCEEEEEECCCHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHH
LALGDALAVALLQSRGFTALDFRQFHPGGKLGASLKFVRDVMRQGDAVPVVAAGTLMGAA
HHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHH
LVEMSTKGLGCVGVVGPDGALTGIVTDGDLRRHMANDLPTRTVDEIMTAAPKTVRPDQLA
HHHHHCCCCCEEEEECCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHH
SEALNILNSRKITALMVVEGQAPVGVLHIHDLLLTGIA
HHHHHHHCCCCEEEEEEEECCCCEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]