Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154244811
Identifier: 154244811
GI number: 154244811
Start: 959845
End: 960819
Strand: Direct
Name: 154244811
Synonym: Xaut_0861
Alternate gene names: NA
Gene position: 959845-960819 (Clockwise)
Preceding gene: 154244810
Following gene: 154244812
Centisome position: 18.08
GC content: 62.46
Gene sequence:
>975_bases GTGTCCAGCCTGCACGAACAGCTTGTCGTCATCGACGGCCTTATCATCTCCGATTTCAGCCGTGCGGTGTTCGAGGACAT GCGCAAGGGCGGCCTCACCGCCGCCAACTGCACCTGCTGCGTGTGGGACAACTTCACCGAGACCATGCGCAATATAGCCA AGTGGAAGAAGGATTTCGCGGCCAACGCGGACATCATCTCCCAGGTCTACACCACGCAGGACATCCTGAAGGCCAAGGCC GAGGGCAAGACCGGCATCATCCTCGGCTGGCAGAACACCTCCGGCATCGAAGACCACATCGAATATCTCCAGCTTTTCCA TGAGCTGGGCGTGCGCATCATCCAGATGACGTACAACACCCAGAACTGGGTCGGTTCCGGCTGCTACGAGGGCACCGACA GCGGCCTCTCCGACTTCGGCCATGACGTGGTGGCGGAGATGAACCGCCTCGGCATCCTGTGCGACCTTTCGCACGTGGGG CCGAAGACTTCGGAAGACACCATCAAGGCGTCGAAGCAGCGCGTGGCCTATTCCCACTGCCTGCCGGCGGGGCTCAAGGC CCATCCGCGCAACAAGAGCGACGCGCAGCTGCGCTTCATCGCCGACAAGGGCGGCTTCATCGGCGTCACCATGTTCCCGC CCTTCCTGGCGAAGGGGCCTGAGGCCACCGTCGCCGATTATGTGGAGGCGATGGAATACATCATCAACATCGCCGGCGAA GACGTGGTGGGCGTGGGCACCGACTTCACCCAAGGCTACGGCCAGCCCTTCTTCGACTGGATCACCCACGACAAGGGCTT CGGCCGCAAGCTCACGGATTTCGGTGCCGTCATCAATCCGGAAGGCTTCCGCGAGATCGGCGACTTCCCGAACCTCACCG CCGCCATGGAACAGCGCGGCTGGTCCACCGCCCGCATCGAGAAGGTGATGGGGCAGAACTGGCTCCAGCTGCTCAAGGAC GTGTGGGGCGCTTGA
Upstream 100 bases:
>100_bases GCACCCGCTCCTTTTCCAGTATCCGCCGACGTAAGTCTGGCACCTCAGAAGGCATTTCGCCGTGAATCTGCACGTTTCGC CCACGAAGGAAGATCAAGCC
Downstream 100 bases:
>100_bases GCCCCATTTCGTCTTTCCTCCAACGCGGGACTACTTTCAAGATGGCCAAGCCCGAGATCGAGATCGACGTGGACCCGGCG ACGGGACGCTGGTTCGTGGA
Product: membrane dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSSLHEQLVVIDGLIISDFSRAVFEDMRKGGLTAANCTCCVWDNFTETMRNIAKWKKDFAANADIISQVYTTQDILKAKA EGKTGIILGWQNTSGIEDHIEYLQLFHELGVRIIQMTYNTQNWVGSGCYEGTDSGLSDFGHDVVAEMNRLGILCDLSHVG PKTSEDTIKASKQRVAYSHCLPAGLKAHPRNKSDAQLRFIADKGGFIGVTMFPPFLAKGPEATVADYVEAMEYIINIAGE DVVGVGTDFTQGYGQPFFDWITHDKGFGRKLTDFGAVINPEGFREIGDFPNLTAAMEQRGWSTARIEKVMGQNWLQLLKD VWGA
Sequences:
>Translated_324_residues MSSLHEQLVVIDGLIISDFSRAVFEDMRKGGLTAANCTCCVWDNFTETMRNIAKWKKDFAANADIISQVYTTQDILKAKA EGKTGIILGWQNTSGIEDHIEYLQLFHELGVRIIQMTYNTQNWVGSGCYEGTDSGLSDFGHDVVAEMNRLGILCDLSHVG PKTSEDTIKASKQRVAYSHCLPAGLKAHPRNKSDAQLRFIADKGGFIGVTMFPPFLAKGPEATVADYVEAMEYIINIAGE DVVGVGTDFTQGYGQPFFDWITHDKGFGRKLTDFGAVINPEGFREIGDFPNLTAAMEQRGWSTARIEKVMGQNWLQLLKD VWGA >Mature_323_residues SSLHEQLVVIDGLIISDFSRAVFEDMRKGGLTAANCTCCVWDNFTETMRNIAKWKKDFAANADIISQVYTTQDILKAKAE GKTGIILGWQNTSGIEDHIEYLQLFHELGVRIIQMTYNTQNWVGSGCYEGTDSGLSDFGHDVVAEMNRLGILCDLSHVGP KTSEDTIKASKQRVAYSHCLPAGLKAHPRNKSDAQLRFIADKGGFIGVTMFPPFLAKGPEATVADYVEAMEYIINIAGED VVGVGTDFTQGYGQPFFDWITHDKGFGRKLTDFGAVINPEGFREIGDFPNLTAAMEQRGWSTARIEKVMGQNWLQLLKDV WGA
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI189458885, Length=259, Percent_Identity=27.027027027027, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI4758190, Length=259, Percent_Identity=27.027027027027, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI11641269, Length=245, Percent_Identity=26.530612244898, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI193211608, Length=258, Percent_Identity=24.4186046511628, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI193211610, Length=258, Percent_Identity=24.4186046511628, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI281362638, Length=319, Percent_Identity=27.8996865203762, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI281362636, Length=319, Percent_Identity=27.8996865203762, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI161083233, Length=273, Percent_Identity=27.1062271062271, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI221475880, Length=317, Percent_Identity=25.2365930599369, Blast_Score=102, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 35864; Mature: 35733
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLHEQLVVIDGLIISDFSRAVFEDMRKGGLTAANCTCCVWDNFTETMRNIAKWKKDFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHC ANADIISQVYTTQDILKAKAEGKTGIILGWQNTSGIEDHIEYLQLFHELGVRIIQMTYNT CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECC QNWVGSGCYEGTDSGLSDFGHDVVAEMNRLGILCDLSHVGPKTSEDTIKASKQRVAYSHC CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHH LPAGLKAHPRNKSDAQLRFIADKGGFIGVTMFPPFLAKGPEATVADYVEAMEYIINIAGE CCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHCCC DVVGVGTDFTQGYGQPFFDWITHDKGFGRKLTDFGAVINPEGFREIGDFPNLTAAMEQRG CEEECCCCHHHHCCCHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHCCCCCHHHHHHHCC WSTARIEKVMGQNWLQLLKDVWGA CHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSLHEQLVVIDGLIISDFSRAVFEDMRKGGLTAANCTCCVWDNFTETMRNIAKWKKDFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHC ANADIISQVYTTQDILKAKAEGKTGIILGWQNTSGIEDHIEYLQLFHELGVRIIQMTYNT CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECC QNWVGSGCYEGTDSGLSDFGHDVVAEMNRLGILCDLSHVGPKTSEDTIKASKQRVAYSHC CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHH LPAGLKAHPRNKSDAQLRFIADKGGFIGVTMFPPFLAKGPEATVADYVEAMEYIINIAGE CCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHCCC DVVGVGTDFTQGYGQPFFDWITHDKGFGRKLTDFGAVINPEGFREIGDFPNLTAAMEQRG CEEECCCCHHHHCCCHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHCCCCCHHHHHHHCC WSTARIEKVMGQNWLQLLKDVWGA CHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]