Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154244800
Identifier: 154244800
GI number: 154244800
Start: 947519
End: 948493
Strand: Direct
Name: 154244800
Synonym: Xaut_0850
Alternate gene names: NA
Gene position: 947519-948493 (Clockwise)
Preceding gene: 154244799
Following gene: 154244801
Centisome position: 17.85
GC content: 72.72
Gene sequence:
>975_bases ATGTCGGAACGGGAGATGTCGGACAAGGATCCGTTGAAGGGCGTCGTCGCCCGCCTGCCGGAGCTGGTGGCCGCGCGCCC GCGCGGGGGCGGCGGCTTTGCGCCCGGCGGCAAGGTGCGGACCCACCAGTTCGGCGGCCACCGCTCGTCCTTCCGCGGCC GCGGCATGGAATTCGACGAGGTGCGAGCCTACCATCCCGGCGACGATGTGCGCACCATCGACTGGCGTGTCACCGCGCGC ACCGGGCGCACCCACACCAAGCTGTTCCAGGAGGAGCGCGAGCGCCCGGTCCTGATCCTCGCCGATGCGCGCGCGCCCAT GCGCTTCGGCACGCGCGACAGCTTCAAGTCGGTGCTGGCTGCAAAGGCGGCGGCCATCCTGGCCTGGGTCGGCATCGCCG GCGGCGACCGGGTGGGGGGCGTGGTGCTGGCACCGTCCGGTGTCAGCGCCTTCCGGCCCGAGCGCAGCCGCAGGCGAATC CTGAATTTCGTGCGCGCCGTGGCCGATGCCACCGCCGAGCGGGTGGGACCGGCGCCGGAGGAGCCCACGCTGGCGGAAGC CCTGGCGCGGACCCGGTCGCTGGCCCGGCCCGGCACGCTGGTCTTCCTTGTCACCGACTTTGGCGATCTCGATGTCCATG CCGTGCGCGAGCTGGAGCGGCTCGCGGTGGACAATCACGTCACCTGCCTGTTCGTGTTCGACCGGCTCGAGGCGCAGATG CCGGACCCCGGCCACTATCCTGTCACCAACGGGGTTGCGGTGGCGCGGCTCGATGCGGAGCGGGCGGCGCTGCGGGCGGC CTATGCCCAGCGCTTCGCCGTGCGCCATGACGGGGTCGAGCGGATCTGCCGCGAGCGCGGCATGACCTTCCTGGACCTTG AGACCGGCAGCGATCCGGCGGATGTGCTGCATCCCGAGCGGCTGCGGCCGCTCCAGTCGGCGGGGCGGCGGGCAATGGGG CGTGCCCCGGCATGA
Upstream 100 bases:
>100_bases TGCTCATGACCTTCGAGGCCGAGGCCGACGGGGTGACGAGCGACGATTTCATCGACCTCCTCATCGCCCGGGTGCCGGTG GGCTGAGGTCGCGGACTGCC
Downstream 100 bases:
>100_bases CCTCTCCCACCACGCTCCCGCCCACCGCGCCCGATTTCTCGACCCCGGACTTCCTGACGCCGGGGGGGAAGATCCCAGAC GCCCCGGCGCCGCCCTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSEREMSDKDPLKGVVARLPELVAARPRGGGGFAPGGKVRTHQFGGHRSSFRGRGMEFDEVRAYHPGDDVRTIDWRVTAR TGRTHTKLFQEERERPVLILADARAPMRFGTRDSFKSVLAAKAAAILAWVGIAGGDRVGGVVLAPSGVSAFRPERSRRRI LNFVRAVADATAERVGPAPEEPTLAEALARTRSLARPGTLVFLVTDFGDLDVHAVRELERLAVDNHVTCLFVFDRLEAQM PDPGHYPVTNGVAVARLDAERAALRAAYAQRFAVRHDGVERICRERGMTFLDLETGSDPADVLHPERLRPLQSAGRRAMG RAPA
Sequences:
>Translated_324_residues MSEREMSDKDPLKGVVARLPELVAARPRGGGGFAPGGKVRTHQFGGHRSSFRGRGMEFDEVRAYHPGDDVRTIDWRVTAR TGRTHTKLFQEERERPVLILADARAPMRFGTRDSFKSVLAAKAAAILAWVGIAGGDRVGGVVLAPSGVSAFRPERSRRRI LNFVRAVADATAERVGPAPEEPTLAEALARTRSLARPGTLVFLVTDFGDLDVHAVRELERLAVDNHVTCLFVFDRLEAQM PDPGHYPVTNGVAVARLDAERAALRAAYAQRFAVRHDGVERICRERGMTFLDLETGSDPADVLHPERLRPLQSAGRRAMG RAPA >Mature_323_residues SEREMSDKDPLKGVVARLPELVAARPRGGGGFAPGGKVRTHQFGGHRSSFRGRGMEFDEVRAYHPGDDVRTIDWRVTART GRTHTKLFQEERERPVLILADARAPMRFGTRDSFKSVLAAKAAAILAWVGIAGGDRVGGVVLAPSGVSAFRPERSRRRIL NFVRAVADATAERVGPAPEEPTLAEALARTRSLARPGTLVFLVTDFGDLDVHAVRELERLAVDNHVTCLFVFDRLEAQMP DPGHYPVTNGVAVARLDAERAALRAAYAQRFAVRHDGVERICRERGMTFLDLETGSDPADVLHPERLRPLQSAGRRAMGR APA
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.avium MAV169 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002881 - InterPro: IPR002035 [H]
Pfam domain/function: PF01882 DUF58 [H]
EC number: NA
Molecular weight: Translated: 35508; Mature: 35377
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEREMSDKDPLKGVVARLPELVAARPRGGGGFAPGGKVRTHQFGGHRSSFRGRGMEFDE CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHH VRAYHPGDDVRTIDWRVTARTGRTHTKLFQEERERPVLILADARAPMRFGTRDSFKSVLA HCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHH AKAAAILAWVGIAGGDRVGGVVLAPSGVSAFRPERSRRRILNFVRAVADATAERVGPAPE HHHHHHHHHHHCCCCCCCCCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC EPTLAEALARTRSLARPGTLVFLVTDFGDLDVHAVRELERLAVDNHVTCLFVFDRLEAQM CCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEHHHHCC PDPGHYPVTNGVAVARLDAERAALRAAYAQRFAVRHDGVERICRERGMTFLDLETGSDPA CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH DVLHPERLRPLQSAGRRAMGRAPA HHCCHHHCCHHHHHCHHHCCCCCC >Mature Secondary Structure SEREMSDKDPLKGVVARLPELVAARPRGGGGFAPGGKVRTHQFGGHRSSFRGRGMEFDE CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHH VRAYHPGDDVRTIDWRVTARTGRTHTKLFQEERERPVLILADARAPMRFGTRDSFKSVLA HCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHH AKAAAILAWVGIAGGDRVGGVVLAPSGVSAFRPERSRRRILNFVRAVADATAERVGPAPE HHHHHHHHHHHCCCCCCCCCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC EPTLAEALARTRSLARPGTLVFLVTDFGDLDVHAVRELERLAVDNHVTCLFVFDRLEAQM CCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEHHHHCC PDPGHYPVTNGVAVARLDAERAALRAAYAQRFAVRHDGVERICRERGMTFLDLETGSDPA CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH DVLHPERLRPLQSAGRRAMGRAPA HHCCHHHCCHHHHHCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]