Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154244756
Identifier: 154244756
GI number: 154244756
Start: 899903
End: 900646
Strand: Reverse
Name: 154244756
Synonym: Xaut_0806
Alternate gene names: NA
Gene position: 900646-899903 (Counterclockwise)
Preceding gene: 154244757
Following gene: 154244755
Centisome position: 16.96
GC content: 66.67
Gene sequence:
>744_bases ATGGCCAGACAGGACCGCGCCCGCCCAGGCGGCGCCCGCAGCAATCTCTATGACGACATCACCGACAAGATCATCGCCGA GCTGGAGGAAGGCCGGCTGCCCTGGGTCCAGCCCTGGGGGACGGCGGCGGCGAAAGCGCCGCTCGCCATGCCGAGAAACG CCGCAACCTCGCGGCAATATTCCGGGATCAATGTCCTGATCCTCTGGGGCGCCGTGGTCCAGCACGGCTATCCCAGCCAG CATTGGCTCACCTTCCGGCAAGCGCTCTCGCTGGGCGGAAATGTCCGCAAGGGCGAGCGCGGCACCACCGTCGTCTATGC CGACCGCTTCACGCCGGAGGACGAGAAGCGCCGCGCTCTGGAGGCGGGCGAGGAAGCCAGCAGCATTCCGTTCCTGAAGC GCTTCACCGTCTTCAATGCCGCGCAATGCGAGGGCCTGCCCGAGGACATAGCCGTTGAGGCCCCGCCACCGCCGCCCGGC ATGATCGAGCCGCGGGTTGAGGCGCTGATCGAAGCGACCGGGATCGACTTCCGCATCGGCGGGGATCGCGCCTTCTATGT TCCGGCGCTCGACTACGTCCAGGTGCCGCCCCCGGCCGCCTATTTCGAGCCGATCAACTGGCACAGGACGGCGCTGCACG AGATGGGTCATGCGACAGGCCATGCCTCGCGCCTGGGGCGGGATTTTTCGGGCAGCTTCGGCACGAAGAAATACGCCTTC GAGGAACTGGTCGCTTTATCCTGA
Upstream 100 bases:
>100_bases CCCCGCAACGCCCCCTGAGAGGGAGAGTGCGGACGGATTTTCCGTGACGGGTTGAGGGCTGGAGGAGTGGCCTCCGGCGC CCGTCGCGGAGATCATCCCG
Downstream 100 bases:
>100_bases CTCTGTGATCCTGTCTCAGAATCATGCATTGGAGGCGCCTCACCACGGCTCCGGTGAAGCTCTTCAGACGTCCGGGTCAA GCGTTCCCGCAGCGTAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MARQDRARPGGARSNLYDDITDKIIAELEEGRLPWVQPWGTAAAKAPLAMPRNAATSRQYSGINVLILWGAVVQHGYPSQ HWLTFRQALSLGGNVRKGERGTTVVYADRFTPEDEKRRALEAGEEASSIPFLKRFTVFNAAQCEGLPEDIAVEAPPPPPG MIEPRVEALIEATGIDFRIGGDRAFYVPALDYVQVPPPAAYFEPINWHRTALHEMGHATGHASRLGRDFSGSFGTKKYAF EELVALS
Sequences:
>Translated_247_residues MARQDRARPGGARSNLYDDITDKIIAELEEGRLPWVQPWGTAAAKAPLAMPRNAATSRQYSGINVLILWGAVVQHGYPSQ HWLTFRQALSLGGNVRKGERGTTVVYADRFTPEDEKRRALEAGEEASSIPFLKRFTVFNAAQCEGLPEDIAVEAPPPPPG MIEPRVEALIEATGIDFRIGGDRAFYVPALDYVQVPPPAAYFEPINWHRTALHEMGHATGHASRLGRDFSGSFGTKKYAF EELVALS >Mature_246_residues ARQDRARPGGARSNLYDDITDKIIAELEEGRLPWVQPWGTAAAKAPLAMPRNAATSRQYSGINVLILWGAVVQHGYPSQH WLTFRQALSLGGNVRKGERGTTVVYADRFTPEDEKRRALEAGEEASSIPFLKRFTVFNAAQCEGLPEDIAVEAPPPPPGM IEPRVEALIEATGIDFRIGGDRAFYVPALDYVQVPPPAAYFEPINWHRTALHEMGHATGHASRLGRDFSGSFGTKKYAFE ELVALS
Specific function: Unknown
COG id: COG4227
COG function: function code L; Antirestriction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017113 - InterPro: IPR013610 [H]
Pfam domain/function: PF08401 DUF1738 [H]
EC number: NA
Molecular weight: Translated: 27200; Mature: 27069
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQDRARPGGARSNLYDDITDKIIAELEEGRLPWVQPWGTAAAKAPLAMPRNAATSRQY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC SGINVLILWGAVVQHGYPSQHWLTFRQALSLGGNVRKGERGTTVVYADRFTPEDEKRRAL CCCEEEEEEHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHH EAGEEASSIPFLKRFTVFNAAQCEGLPEDIAVEAPPPPPGMIEPRVEALIEATGIDFRIG HCCCCCCCCCHHHHHHHHCHHHHCCCCHHCEEECCCCCCCCCCHHHHHHHHHCCCEEEEC GDRAFYVPALDYVQVPPPAAYFEPINWHRTALHEMGHATGHASRLGRDFSGSFGTKKYAF CCEEEEECCCCEEECCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHH EELVALS HHHHHCC >Mature Secondary Structure ARQDRARPGGARSNLYDDITDKIIAELEEGRLPWVQPWGTAAAKAPLAMPRNAATSRQY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC SGINVLILWGAVVQHGYPSQHWLTFRQALSLGGNVRKGERGTTVVYADRFTPEDEKRRAL CCCEEEEEEHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHH EAGEEASSIPFLKRFTVFNAAQCEGLPEDIAVEAPPPPPGMIEPRVEALIEATGIDFRIG HCCCCCCCCCHHHHHHHHCHHHHCCCCHHCEEECCCCCCCCCCHHHHHHHHHCCCEEEEC GDRAFYVPALDYVQVPPPAAYFEPINWHRTALHEMGHATGHASRLGRDFSGSFGTKKYAF CCEEEEECCCCEEECCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHH EELVALS HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]