Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is gor [H]
Identifier: 154244746
GI number: 154244746
Start: 887428
End: 888774
Strand: Reverse
Name: gor [H]
Synonym: Xaut_0796
Alternate gene names: 154244746
Gene position: 888774-887428 (Counterclockwise)
Preceding gene: 154244747
Following gene: 154244745
Centisome position: 16.74
GC content: 62.81
Gene sequence:
>1347_bases GTGGCGAAGAGATATGACCTTGCGATCATCGGCACGGGAACGGCTGCGATCGTAACAGCACACAGGGTTCGTGCGGCTGG CTGGAGCGTCGCCGTCGCGGACTTCCGGCCCTTCGGGGGCACCTGCGCCTTGCGCGGTTGCGATCCGAAGAAGATGATGG TCGGCGGCGCCGAGGCGGCTGATCACGCCTGGCGCATGAGCGGACGTGGAATCGAAGGGGACGCGACGCTCGATTGGACG GGACTGATGGCCTTCAAGCGCAGCTTCACCGATCCGGTACCGCAGAAGCGTGAGAAAGCCTTTGCCGACAAAGGGATTCA CGCCTTCCACGGTCACGTTCGCTTTATCGGCCCGAATGCGCTCGAGTTCGGAGGAGAGAGGATCGAGGCGGACCGTATCG TGATCGCCGCCGGCGCCGAGGCCGTGCCGCTCGGCATTCCGGGCGAGCAGCACCTGATCACCAATGAAGGCTTCCTGGAA CTGGAGAGCCTGCCTGAACGCATCGTCCTTGTCGGCGGCGGTTATATCGCGGCCGAGTTTTCGCACATCGCGGCGCGCGC CGGAGCACAGGTCACAATTCTTCAGCACGGGAAGCGAATGCTCAAGCAATTCGACCCCGATCTCGTCGGCTGGCTGATGG ACAAGTTCAGCGAGCGCGGCATCAATGTCCGCACACAGGCAGGGGTGACCGCCATTGAGAAGGTATCAGACGGCTATCGC GTCCGGGCGGACTGTCCTGACGGCGAACTCGATATGGACGCAGATCTGGTCGTCCATGCCGCGGGTCGGGCGCCGGCGCT CGCGACGCTCGATCTCGATGCCGGGAGCGTAAAGCACCATAACGGGCGGCTGGCGTTGAACGGATTTTTGCAAAGCGTCT CCAACCCCGCGGTCTACGCAGCAGGTGATGCCGCCGGCCTAGGACCGCCGCTCACTCCGGTATCAAGCCATGACGCGAAG GTAGTCTCGGCGAACCTGCTCAACGGCAACACGGTCAGGCCTGAATACACAGGCGTTCCGAGTGTCGCCTTCACCATCCC GCCGATCGCAGCCGTCGGCATGAGCGAAGCCAAGGCGCGTGAGAAAGGCCTGAACGTTCGCGTAAAGACCGAGCGCGTGG ACGGCTGGTTCACCGCACGCCAGCAGGCCGAGACGGTGTATGGCTTCAAAACGTTGGTCGACGCGGACACTGACCGCATC CTCGGCGCCCATCTTGTCGGTCCGCACGCTGACGAAGTGATCAACATCTTTGCACTGGCGATCAGGCAAGGGCTGACGGC AGAGCAGTTGAAGACCACCATGTTCGCATATCCCAGCGGCGCGTCAGATATCGGCGAGATGCTTTGA
Upstream 100 bases:
>100_bases CGGCTCTTGCCTTCGACAAGGACGTGGCGAAGCTCTCATGCTGCGCCGGCTGAGCCGTGAAGGCTCGGATGTCGAACGTG ACAATGTTGGAGGAGATCTA
Downstream 100 bases:
>100_bases GCGTAAGTGAGGTGGTCGACCGGTACGGCCGCGGAGCAGTCTGCACGAAAGAAATCCCTTCACCAGTCGCATTCGGTTCG CTGAGCAGTCGTAAAAACCA
Product: pyridine nucleotide-disulfide oxidoreductase dimerisation region
Products: NA
Alternate protein names: GR; GRase [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MAKRYDLAIIGTGTAAIVTAHRVRAAGWSVAVADFRPFGGTCALRGCDPKKMMVGGAEAADHAWRMSGRGIEGDATLDWT GLMAFKRSFTDPVPQKREKAFADKGIHAFHGHVRFIGPNALEFGGERIEADRIVIAAGAEAVPLGIPGEQHLITNEGFLE LESLPERIVLVGGGYIAAEFSHIAARAGAQVTILQHGKRMLKQFDPDLVGWLMDKFSERGINVRTQAGVTAIEKVSDGYR VRADCPDGELDMDADLVVHAAGRAPALATLDLDAGSVKHHNGRLALNGFLQSVSNPAVYAAGDAAGLGPPLTPVSSHDAK VVSANLLNGNTVRPEYTGVPSVAFTIPPIAAVGMSEAKAREKGLNVRVKTERVDGWFTARQQAETVYGFKTLVDADTDRI LGAHLVGPHADEVINIFALAIRQGLTAEQLKTTMFAYPSGASDIGEML
Sequences:
>Translated_448_residues MAKRYDLAIIGTGTAAIVTAHRVRAAGWSVAVADFRPFGGTCALRGCDPKKMMVGGAEAADHAWRMSGRGIEGDATLDWT GLMAFKRSFTDPVPQKREKAFADKGIHAFHGHVRFIGPNALEFGGERIEADRIVIAAGAEAVPLGIPGEQHLITNEGFLE LESLPERIVLVGGGYIAAEFSHIAARAGAQVTILQHGKRMLKQFDPDLVGWLMDKFSERGINVRTQAGVTAIEKVSDGYR VRADCPDGELDMDADLVVHAAGRAPALATLDLDAGSVKHHNGRLALNGFLQSVSNPAVYAAGDAAGLGPPLTPVSSHDAK VVSANLLNGNTVRPEYTGVPSVAFTIPPIAAVGMSEAKAREKGLNVRVKTERVDGWFTARQQAETVYGFKTLVDADTDRI LGAHLVGPHADEVINIFALAIRQGLTAEQLKTTMFAYPSGASDIGEML >Mature_447_residues AKRYDLAIIGTGTAAIVTAHRVRAAGWSVAVADFRPFGGTCALRGCDPKKMMVGGAEAADHAWRMSGRGIEGDATLDWTG LMAFKRSFTDPVPQKREKAFADKGIHAFHGHVRFIGPNALEFGGERIEADRIVIAAGAEAVPLGIPGEQHLITNEGFLEL ESLPERIVLVGGGYIAAEFSHIAARAGAQVTILQHGKRMLKQFDPDLVGWLMDKFSERGINVRTQAGVTAIEKVSDGYRV RADCPDGELDMDADLVVHAAGRAPALATLDLDAGSVKHHNGRLALNGFLQSVSNPAVYAAGDAAGLGPPLTPVSSHDAKV VSANLLNGNTVRPEYTGVPSVAFTIPPIAAVGMSEAKAREKGLNVRVKTERVDGWFTARQQAETVYGFKTLVDADTDRIL GAHLVGPHADEVINIFALAIRQGLTAEQLKTTMFAYPSGASDIGEML
Specific function: Maintains high levels of reduced glutathione in the cytosol [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=456, Percent_Identity=26.0964912280702, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI91199540, Length=452, Percent_Identity=26.9911504424779, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI33519430, Length=430, Percent_Identity=27.6744186046512, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI33519428, Length=430, Percent_Identity=27.6744186046512, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI33519426, Length=430, Percent_Identity=27.6744186046512, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI148277065, Length=430, Percent_Identity=27.6744186046512, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI148277071, Length=429, Percent_Identity=27.7389277389277, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI291045266, Length=486, Percent_Identity=26.9547325102881, Blast_Score=128, Evalue=9e-30, Organism=Homo sapiens, GI22035672, Length=473, Percent_Identity=25.369978858351, Blast_Score=108, Evalue=9e-24, Organism=Homo sapiens, GI291045268, Length=482, Percent_Identity=25.3112033195021, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1789915, Length=459, Percent_Identity=30.718954248366, Blast_Score=192, Evalue=4e-50, Organism=Escherichia coli, GI87081717, Length=458, Percent_Identity=29.2576419213974, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1786307, Length=456, Percent_Identity=27.6315789473684, Blast_Score=135, Evalue=6e-33, Organism=Escherichia coli, GI87082354, Length=455, Percent_Identity=23.956043956044, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789065, Length=214, Percent_Identity=28.0373831775701, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17557007, Length=476, Percent_Identity=26.4705882352941, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI32565766, Length=462, Percent_Identity=26.8398268398268, Blast_Score=140, Evalue=9e-34, Organism=Caenorhabditis elegans, GI71983429, Length=454, Percent_Identity=27.7533039647577, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71983419, Length=455, Percent_Identity=27.6923076923077, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71982272, Length=459, Percent_Identity=24.400871459695, Blast_Score=105, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6325166, Length=464, Percent_Identity=24.3534482758621, Blast_Score=155, Evalue=9e-39, Organism=Saccharomyces cerevisiae, GI6321091, Length=466, Percent_Identity=25.5364806866953, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6325240, Length=486, Percent_Identity=24.2798353909465, Blast_Score=95, Evalue=3e-20, Organism=Drosophila melanogaster, GI21358499, Length=460, Percent_Identity=28.4782608695652, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI17737741, Length=475, Percent_Identity=27.7894736842105, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI24640553, Length=474, Percent_Identity=28.0590717299578, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI24640549, Length=474, Percent_Identity=28.0590717299578, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI24640551, Length=474, Percent_Identity=28.0590717299578, Blast_Score=132, Evalue=5e-31,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.7 [H]
Molecular weight: Translated: 47616; Mature: 47485
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRYDLAIIGTGTAAIVTAHRVRAAGWSVAVADFRPFGGTCALRGCDPKKMMVGGAEAA CCCEEEEEEEECCCEEEEEHHHHHHCCCEEEEECCCCCCCEEEECCCCCHHEEECCCCHH DHAWRMSGRGIEGDATLDWTGLMAFKRSFTDPVPQKREKAFADKGIHAFHGHVRFIGPNA HHHHCCCCCCCCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECEEEEECCCH LEFGGERIEADRIVIAAGAEAVPLGIPGEQHLITNEGFLELESLPERIVLVGGGYIAAEF HHCCCCEEECCEEEEEECCCEEEECCCCCCEEECCCCCEECCCCCCEEEEEECCEEEHHH SHIAARAGAQVTILQHGKRMLKQFDPDLVGWLMDKFSERGINVRTQAGVTAIEKVSDGYR HHHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCE VRADCPDGELDMDADLVVHAAGRAPALATLDLDAGSVKHHNGRLALNGFLQSVSNPAVYA EEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEECCCEEEEHHHHHHCCCCEEEE AGDAAGLGPPLTPVSSHDAKVVSANLLNGNTVRPEYTGVPSVAFTIPPIAAVGMSEAKAR CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCHHHCCCHHHHHH EKGLNVRVKTERVDGWFTARQQAETVYGFKTLVDADTDRILGAHLVGPHADEVINIFALA HCCCCEEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHH IRQGLTAEQLKTTMFAYPSGASDIGEML HHCCCCHHHHHHEEEECCCCCHHHHHCC >Mature Secondary Structure AKRYDLAIIGTGTAAIVTAHRVRAAGWSVAVADFRPFGGTCALRGCDPKKMMVGGAEAA CCEEEEEEEECCCEEEEEHHHHHHCCCEEEEECCCCCCCEEEECCCCCHHEEECCCCHH DHAWRMSGRGIEGDATLDWTGLMAFKRSFTDPVPQKREKAFADKGIHAFHGHVRFIGPNA HHHHCCCCCCCCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECEEEEECCCH LEFGGERIEADRIVIAAGAEAVPLGIPGEQHLITNEGFLELESLPERIVLVGGGYIAAEF HHCCCCEEECCEEEEEECCCEEEECCCCCCEEECCCCCEECCCCCCEEEEEECCEEEHHH SHIAARAGAQVTILQHGKRMLKQFDPDLVGWLMDKFSERGINVRTQAGVTAIEKVSDGYR HHHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCE VRADCPDGELDMDADLVVHAAGRAPALATLDLDAGSVKHHNGRLALNGFLQSVSNPAVYA EEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEECCCEEEEHHHHHHCCCCEEEE AGDAAGLGPPLTPVSSHDAKVVSANLLNGNTVRPEYTGVPSVAFTIPPIAAVGMSEAKAR CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCHHHCCCHHHHHH EKGLNVRVKTERVDGWFTARQQAETVYGFKTLVDADTDRILGAHLVGPHADEVINIFALA HCCCCEEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHH IRQGLTAEQLKTTMFAYPSGASDIGEML HHCCCCHHHHHHEEEECCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849605; 10984043 [H]