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The map label for this gene is intA [C]

Identifier: 154244742

GI number: 154244742

Start: 884649

End: 885902

Strand: Reverse

Name: intA [C]

Synonym: Xaut_0792

Alternate gene names: 154244742

Gene position: 885902-884649 (Counterclockwise)

Preceding gene: 154244743

Following gene: 154244741

Centisome position: 16.69

GC content: 61.16

Gene sequence:

>1254_bases
ATGCCCGTCCTAACCGACACCGCGATCCGGCATGCACTGAGGCGCGTTGAGCTCAGCCGCAAGCAAGAGAACCTCGCCGA
TGGCGAAGGACGCGGCACCGGCCGTCTCGTCCTCGTTCTCAAGCCCATGCCTAAGCGTGTCACCGCCGACTGGATGGCGC
AGCAGTGGCGCGACGGCAAACGCACTAAGAAGAAGATCGGTGCCTATCCGTCGATGTCGCTCGCGCAGGCCCGCGAGATC
TACAAGCGCGACTTTGCCGACGTCATCCAGAAGGGCCGAAGCATCAAGATAGCCACCGATACCCGCCCCGGCACGGTCGC
CGATTTGTTCGAGGGTTATGTCGCCGCGCTCAAGGAAGCCGGTAAGCCGTCCTGGAAGGAAACGGAAAAGGGCCTCAACA
AGATTGCGGACACGCTCGGGCGCAACCGCCTCGCCCGCGAGATCGAGGCCGAGGAAATTATCGAGCTGATCCGCCCGATC
TACGAGCGCGGCGCAAAGTCGATGGCCGACCATGTGCGCTCCTACCTTCATGCTGCCTTCAGCTGGGGCATGAAGTCCGA
CAACGACTATCGGCAGCAATCCTCTCGCCGGTTCCGTCTCCCCTTTAATCCCGCAACCGGCATCCCGACCGAACCCAAGG
TCAAGGGCACTCGCTGGCTCGACGAAGACGAGTTCGTGCTGCTCTATCGCTGGTTGGAATGCCCTGACACGCCAGTCCAT
CCCTCCTATCCACGCGCCGTGCAACTCATCATGCTGACCGGCCAGCGCGTCGAGGAAATTGCGCGACTCCATGTCGATCA
ATGGGACGCCAAGGAGCGAATCATCGACTGGTCCAAGACCAAGAACGAACAGCCCCACGCCGTTCCGGTGCCCTCGCTCG
CTGCCGAACTGATCGAGTCCATCAAGCCAAACGAATACGGCTGGTTCTTCCCTTCGGCCAAGGATCCCAAGAAGCCCGTC
AGCCACGGCACGCTATACAGCTTCGTCTGGCGCCAGCGGGACCGCGGCGTGATCCCCTATGCGACGAATCGCGATCTCCG
CCGGACTTTCAAAACTCTTGCCGGCAAGGCGGGTGTGTCGAAGGAAATCCGCGATCGCCTCCAAAACCACGCCCTCCAGG
ACGTCAGCTCCAAGCACTACGACCGCTGGCACTATATGGTCGAAAAACGCGCCGGCATGGCCAAGTGGGACAGGTTCGTT
CGGGCGCTGCTCAAAAAGAAGAAGGCCAACAACACATTTAAGCAGGCCGCGTGA

Upstream 100 bases:

>100_bases
AATTGGGGGCTGTAAATGGGGTAGAAAACGGCCCTCCGCTCCCAACTAGCGATCCCTGTTTCTCCTCGACCGATCCCAGC
TCCGGAAAGGAGGAAACGTC

Downstream 100 bases:

>100_bases
GCTGTCGCACCCTCGTCGTCGCTGGAATGCTCAGCCTGTTCGGTGCCATCGCTCCCGTCCACGCCGACCCATGCGAGGCG
CCACTGCCGAGTCAACCCGG

Product: integrase family protein

Products: NA

Alternate protein names: Integrase; Phage Integrase; Phage Integrase Family Protein; Transposase; Phage-Like Integrase; Prbable Integrase; Site-Specific Recombinase Phage Integrase Family Protein; Prophage CP4-Like Integrase; Integrative Genetic Element

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MPVLTDTAIRHALRRVELSRKQENLADGEGRGTGRLVLVLKPMPKRVTADWMAQQWRDGKRTKKKIGAYPSMSLAQAREI
YKRDFADVIQKGRSIKIATDTRPGTVADLFEGYVAALKEAGKPSWKETEKGLNKIADTLGRNRLAREIEAEEIIELIRPI
YERGAKSMADHVRSYLHAAFSWGMKSDNDYRQQSSRRFRLPFNPATGIPTEPKVKGTRWLDEDEFVLLYRWLECPDTPVH
PSYPRAVQLIMLTGQRVEEIARLHVDQWDAKERIIDWSKTKNEQPHAVPVPSLAAELIESIKPNEYGWFFPSAKDPKKPV
SHGTLYSFVWRQRDRGVIPYATNRDLRRTFKTLAGKAGVSKEIRDRLQNHALQDVSSKHYDRWHYMVEKRAGMAKWDRFV
RALLKKKKANNTFKQAA

Sequences:

>Translated_417_residues
MPVLTDTAIRHALRRVELSRKQENLADGEGRGTGRLVLVLKPMPKRVTADWMAQQWRDGKRTKKKIGAYPSMSLAQAREI
YKRDFADVIQKGRSIKIATDTRPGTVADLFEGYVAALKEAGKPSWKETEKGLNKIADTLGRNRLAREIEAEEIIELIRPI
YERGAKSMADHVRSYLHAAFSWGMKSDNDYRQQSSRRFRLPFNPATGIPTEPKVKGTRWLDEDEFVLLYRWLECPDTPVH
PSYPRAVQLIMLTGQRVEEIARLHVDQWDAKERIIDWSKTKNEQPHAVPVPSLAAELIESIKPNEYGWFFPSAKDPKKPV
SHGTLYSFVWRQRDRGVIPYATNRDLRRTFKTLAGKAGVSKEIRDRLQNHALQDVSSKHYDRWHYMVEKRAGMAKWDRFV
RALLKKKKANNTFKQAA
>Mature_416_residues
PVLTDTAIRHALRRVELSRKQENLADGEGRGTGRLVLVLKPMPKRVTADWMAQQWRDGKRTKKKIGAYPSMSLAQAREIY
KRDFADVIQKGRSIKIATDTRPGTVADLFEGYVAALKEAGKPSWKETEKGLNKIADTLGRNRLAREIEAEEIIELIRPIY
ERGAKSMADHVRSYLHAAFSWGMKSDNDYRQQSSRRFRLPFNPATGIPTEPKVKGTRWLDEDEFVLLYRWLECPDTPVHP
SYPRAVQLIMLTGQRVEEIARLHVDQWDAKERIIDWSKTKNEQPHAVPVPSLAAELIESIKPNEYGWFFPSAKDPKKPVS
HGTLYSFVWRQRDRGVIPYATNRDLRRTFKTLAGKAGVSKEIRDRLQNHALQDVSSKHYDRWHYMVEKRAGMAKWDRFVR
ALLKKKKANNTFKQAA

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48129; Mature: 47998

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLTDTAIRHALRRVELSRKQENLADGEGRGTGRLVLVLKPMPKRVTADWMAQQWRDGK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCHH
RTKKKIGAYPSMSLAQAREIYKRDFADVIQKGRSIKIATDTRPGTVADLFEGYVAALKEA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHC
GKPSWKETEKGLNKIADTLGRNRLAREIEAEEIIELIRPIYERGAKSMADHVRSYLHAAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWGMKSDNDYRQQSSRRFRLPFNPATGIPTEPKVKGTRWLDEDEFVLLYRWLECPDTPVH
HCCCCCCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCC
PSYPRAVQLIMLTGQRVEEIARLHVDQWDAKERIIDWSKTKNEQPHAVPVPSLAAELIES
CCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHH
IKPNEYGWFFPSAKDPKKPVSHGTLYSFVWRQRDRGVIPYATNRDLRRTFKTLAGKAGVS
CCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC
KEIRDRLQNHALQDVSSKHYDRWHYMVEKRAGMAKWDRFVRALLKKKKANNTFKQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure 
PVLTDTAIRHALRRVELSRKQENLADGEGRGTGRLVLVLKPMPKRVTADWMAQQWRDGK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCHH
RTKKKIGAYPSMSLAQAREIYKRDFADVIQKGRSIKIATDTRPGTVADLFEGYVAALKEA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHC
GKPSWKETEKGLNKIADTLGRNRLAREIEAEEIIELIRPIYERGAKSMADHVRSYLHAAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWGMKSDNDYRQQSSRRFRLPFNPATGIPTEPKVKGTRWLDEDEFVLLYRWLECPDTPVH
HCCCCCCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCC
PSYPRAVQLIMLTGQRVEEIARLHVDQWDAKERIIDWSKTKNEQPHAVPVPSLAAELIES
CCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHH
IKPNEYGWFFPSAKDPKKPVSHGTLYSFVWRQRDRGVIPYATNRDLRRTFKTLAGKAGVS
CCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC
KEIRDRLQNHALQDVSSKHYDRWHYMVEKRAGMAKWDRFVRALLKKKKANNTFKQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA