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The map label for this gene is yubM [H]

Identifier: 154244721

GI number: 154244721

Start: 853930

End: 856056

Strand: Reverse

Name: yubM [H]

Synonym: Xaut_0771

Alternate gene names: 154244721

Gene position: 856056-853930 (Counterclockwise)

Preceding gene: 154244722

Following gene: 154244720

Centisome position: 16.12

GC content: 65.96

Gene sequence:

>2127_bases
ATGGCTACTGCTGTTAAGAAGATCACCCTGTCCTCGTCGCGGGACATCCCTTTCAACAAGCTGGTGCTGAGCCAGTCCAA
TGTTCGCCGGATCAAAGCCGGCGTCTCGATCGAGGAGCTGGCGGAGGACATCGCCCGGCGCACGCTCCTGCAGAGCATCA
CCGTGCGGCCGGTTCGCGATGCCGACGGCGTCGAGACCGGCATGTTCGAGGTTCCGGCCGGCGGCCGTCGCTTCCGCGCG
CTCGAACGCCTAGTCAAGCAGAAGCGCTTGGCCAAGACCGCGCCAGTGCCCTGCGTCGTGCGCGAGGATGGCATCCCCGA
GGAGGACAGCCTCGCCGAGAATGTCCAGCGCGCGCCGCTGCATCCGCTCGATCAGTTCAGGGCCTTCCTGACGCTGCGCG
AGAAGGGCCAGTCCGAGGAAGACATCGCCGCGGCCTTCTTCGTCGCCGTATCGGTGGTCAAGCAGCGCCTGCGCCTGGCG
TCGGTCTCGCCCAAGCTCCTCGACGTCTATGCCGACGATGGCATGACTCTCGACCAGCTCATGGCGTTCACCGTCAACGG
TGACCACGAGCGGCAGGAGCAGGTGTTCGAGCGGCTGAGCCAGTCCTACTCCAAGGAGCCGCACGTCATTCGCCGGATGC
TGACCGAGGGTGCGGTGCGAGCTTCGGACAAGCGCGCGCAGTTCATCGGCCTCGACGCCTACACTGAGGCGGGCGGCGTG
ATTCTGCGCGACCTGTTCCAGGGCGACGACGGCGGCTGGCTGCAGGATGTTGGTCTCCTCGACACGCTGGTGGCCGAGAA
GCTTCGGGAGCAGTCCGAGGCGATCCGCGCCGAAGGCTGGAGGTGGATCGATGTCGCGCCCGACTTCGCCTACGGCCACA
CCTATGGCCTGCGGCAACTGCGCGGCGAGCAGATTCCGCTCACTGACGAGGAGCAGGCGACCCGTGATGCGTTGCAGGCC
GAGATGGACGGTCTGGAGGAGACCTACGCTGAAGCCGACGAGTTGCCCGATGAGGTCGATCAGCGGCTCGGCGAGATCGA
GACGGCGCTTGCCGCCTTCGACGATCGTCCTCAGGCTTTCGATCCCGACGAGGTCGCGCGTGCTGGCGCATTCGTCAGCA
TCGACGGCTCGGGGGTCCTGCGCGTCGAACGTGGCTACGTTCGCCCCGAGGATGAGCTTCCGATTGCTTCGGAGGCCGAC
GTCGAGACCGATCCCGCCGACGAGGATGCGATCGCAGTCCAAGCCGAGGACGACGATGCGAGCGCAGGCGCGGAGTCTCC
TGCGGATGAGCCCGAAGAGGACGATGGCATCAAGCCGATTCCCGACCGGCTGATGACCGAGCTGACCGCCCACAGGACTC
TAGCCCTTCGCCATACCCTGGGCGAGAATCCCGACATCGCGTTCGTCGCGGCGCTTCATGCCCTGTGCCTCAAGGTATTC
TACCGCTACGCACAGGACACCTGCCTGGAGCTCGATGTGAAAAGCGCGGGATTCGGTGCTCAGGCGCCGGGCCTTGCCGA
CAGCGCGCTCGCCGTCGCTTTCGACACCCGGCATCAGGCTTGGATCTCCGCCCTGCCCAAAGAGCCAGCCGATCTCTGGG
ACGGGCTCATGTCGTTCGACACCGACAGCCGTCAGGCGCTGTTCGCGCACTGCGTGTCGTTGTCGGTCAACGCGATCTAT
GAGGCTTACAATCGCAAGCCTCGAGCCCTTGCACACGCCGACCGCATCGCCCAAGCCATCGATCTCGACATGGTCGCCGC
CGGTTGGACGCCGACGATCGGCAACTATTTCGGCCGCGTCACCAAGGCCCGCATCCTTGCAGCAGTGCGGGAGGCGAAGG
GCGCGCGTGCGGGCGACCGCATCGAGCACCTGAAGAAGGCCGAGATGGCGGAACAGGCCGAGACCCTGTTGGCCGGGTCC
GGATGGCTTCCGGAGCCGCTCCGCACGCCTGGTCGCTGCGTGCCGAATGTTGCTGAGTCCGACGTCATTGATTCCGCCGA
AGCGGGCGCCGATGCGGCGGGCGCAGAAACGGCGGCGGACGGCGGCGAAACGGTCGTGGTGGAAGATGAGGAAGTGACCG
AGGATGTATCGGTCGCGCTCGAACACCACGCCACAGCGGCCGAGTAA

Upstream 100 bases:

>100_bases
CGCAGCCCCAACCTCCTAGAGGAAGAGGGCTGCGCTCGCTTCGTGACGGGTTGGAGGCCGAGAGAGAGGCTTTCGGCCGC
CCGTCGCGGAGTACATCCCG

Downstream 100 bases:

>100_bases
CGAAGGAGCCAACCGCACCGTCAGGGGCCCGCCAGCGATGGCGGGCCCTTTTTCGTTCCGGAGGACACGATGCCGGACAA
TGCATCCGATCTGGCGCAAC

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 708; Mature: 707

Protein sequence:

>708_residues
MATAVKKITLSSSRDIPFNKLVLSQSNVRRIKAGVSIEELAEDIARRTLLQSITVRPVRDADGVETGMFEVPAGGRRFRA
LERLVKQKRLAKTAPVPCVVREDGIPEEDSLAENVQRAPLHPLDQFRAFLTLREKGQSEEDIAAAFFVAVSVVKQRLRLA
SVSPKLLDVYADDGMTLDQLMAFTVNGDHERQEQVFERLSQSYSKEPHVIRRMLTEGAVRASDKRAQFIGLDAYTEAGGV
ILRDLFQGDDGGWLQDVGLLDTLVAEKLREQSEAIRAEGWRWIDVAPDFAYGHTYGLRQLRGEQIPLTDEEQATRDALQA
EMDGLEETYAEADELPDEVDQRLGEIETALAAFDDRPQAFDPDEVARAGAFVSIDGSGVLRVERGYVRPEDELPIASEAD
VETDPADEDAIAVQAEDDDASAGAESPADEPEEDDGIKPIPDRLMTELTAHRTLALRHTLGENPDIAFVAALHALCLKVF
YRYAQDTCLELDVKSAGFGAQAPGLADSALAVAFDTRHQAWISALPKEPADLWDGLMSFDTDSRQALFAHCVSLSVNAIY
EAYNRKPRALAHADRIAQAIDLDMVAAGWTPTIGNYFGRVTKARILAAVREAKGARAGDRIEHLKKAEMAEQAETLLAGS
GWLPEPLRTPGRCVPNVAESDVIDSAEAGADAAGAETAADGGETVVVEDEEVTEDVSVALEHHATAAE

Sequences:

>Translated_708_residues
MATAVKKITLSSSRDIPFNKLVLSQSNVRRIKAGVSIEELAEDIARRTLLQSITVRPVRDADGVETGMFEVPAGGRRFRA
LERLVKQKRLAKTAPVPCVVREDGIPEEDSLAENVQRAPLHPLDQFRAFLTLREKGQSEEDIAAAFFVAVSVVKQRLRLA
SVSPKLLDVYADDGMTLDQLMAFTVNGDHERQEQVFERLSQSYSKEPHVIRRMLTEGAVRASDKRAQFIGLDAYTEAGGV
ILRDLFQGDDGGWLQDVGLLDTLVAEKLREQSEAIRAEGWRWIDVAPDFAYGHTYGLRQLRGEQIPLTDEEQATRDALQA
EMDGLEETYAEADELPDEVDQRLGEIETALAAFDDRPQAFDPDEVARAGAFVSIDGSGVLRVERGYVRPEDELPIASEAD
VETDPADEDAIAVQAEDDDASAGAESPADEPEEDDGIKPIPDRLMTELTAHRTLALRHTLGENPDIAFVAALHALCLKVF
YRYAQDTCLELDVKSAGFGAQAPGLADSALAVAFDTRHQAWISALPKEPADLWDGLMSFDTDSRQALFAHCVSLSVNAIY
EAYNRKPRALAHADRIAQAIDLDMVAAGWTPTIGNYFGRVTKARILAAVREAKGARAGDRIEHLKKAEMAEQAETLLAGS
GWLPEPLRTPGRCVPNVAESDVIDSAEAGADAAGAETAADGGETVVVEDEEVTEDVSVALEHHATAAE
>Mature_707_residues
ATAVKKITLSSSRDIPFNKLVLSQSNVRRIKAGVSIEELAEDIARRTLLQSITVRPVRDADGVETGMFEVPAGGRRFRAL
ERLVKQKRLAKTAPVPCVVREDGIPEEDSLAENVQRAPLHPLDQFRAFLTLREKGQSEEDIAAAFFVAVSVVKQRLRLAS
VSPKLLDVYADDGMTLDQLMAFTVNGDHERQEQVFERLSQSYSKEPHVIRRMLTEGAVRASDKRAQFIGLDAYTEAGGVI
LRDLFQGDDGGWLQDVGLLDTLVAEKLREQSEAIRAEGWRWIDVAPDFAYGHTYGLRQLRGEQIPLTDEEQATRDALQAE
MDGLEETYAEADELPDEVDQRLGEIETALAAFDDRPQAFDPDEVARAGAFVSIDGSGVLRVERGYVRPEDELPIASEADV
ETDPADEDAIAVQAEDDDASAGAESPADEPEEDDGIKPIPDRLMTELTAHRTLALRHTLGENPDIAFVAALHALCLKVFY
RYAQDTCLELDVKSAGFGAQAPGLADSALAVAFDTRHQAWISALPKEPADLWDGLMSFDTDSRQALFAHCVSLSVNAIYE
AYNRKPRALAHADRIAQAIDLDMVAAGWTPTIGNYFGRVTKARILAAVREAKGARAGDRIEHLKKAEMAEQAETLLAGSG
WLPEPLRTPGRCVPNVAESDVIDSAEAGADAAGAETAADGGETVVVEDEEVTEDVSVALEHHATAAE

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 77226; Mature: 77095

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAVKKITLSSSRDIPFNKLVLSQSNVRRIKAGVSIEELAEDIARRTLLQSITVRPVRD
CCCCHHEEECCCCCCCCHHHEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
ADGVETGMFEVPAGGRRFRALERLVKQKRLAKTAPVPCVVREDGIPEEDSLAENVQRAPL
CCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCC
HPLDQFRAFLTLREKGQSEEDIAAAFFVAVSVVKQRLRLASVSPKLLDVYADDGMTLDQL
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCHHHH
MAFTVNGDHERQEQVFERLSQSYSKEPHVIRRMLTEGAVRASDKRAQFIGLDAYTEAGGV
HEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECHHHHHCCHH
ILRDLFQGDDGGWLQDVGLLDTLVAEKLREQSEAIRAEGWRWIDVAPDFAYGHTYGLRQL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH
RGEQIPLTDEEQATRDALQAEMDGLEETYAEADELPDEVDQRLGEIETALAAFDDRPQAF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
DPDEVARAGAFVSIDGSGVLRVERGYVRPEDELPIASEADVETDPADEDAIAVQAEDDDA
CHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
SAGAESPADEPEEDDGIKPIPDRLMTELTAHRTLALRHTLGENPDIAFVAALHALCLKVF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
YRYAQDTCLELDVKSAGFGAQAPGLADSALAVAFDTRHQAWISALPKEPADLWDGLMSFD
HHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHCC
TDSRQALFAHCVSLSVNAIYEAYNRKPRALAHADRIAQAIDLDMVAAGWTPTIGNYFGRV
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH
TKARILAAVREAKGARAGDRIEHLKKAEMAEQAETLLAGSGWLPEPLRTPGRCVPNVAES
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHH
DVIDSAEAGADAAGAETAADGGETVVVEDEEVTEDVSVALEHHATAAE
HHHCCHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ATAVKKITLSSSRDIPFNKLVLSQSNVRRIKAGVSIEELAEDIARRTLLQSITVRPVRD
CCCHHEEECCCCCCCCHHHEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
ADGVETGMFEVPAGGRRFRALERLVKQKRLAKTAPVPCVVREDGIPEEDSLAENVQRAPL
CCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCC
HPLDQFRAFLTLREKGQSEEDIAAAFFVAVSVVKQRLRLASVSPKLLDVYADDGMTLDQL
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCHHHH
MAFTVNGDHERQEQVFERLSQSYSKEPHVIRRMLTEGAVRASDKRAQFIGLDAYTEAGGV
HEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECHHHHHCCHH
ILRDLFQGDDGGWLQDVGLLDTLVAEKLREQSEAIRAEGWRWIDVAPDFAYGHTYGLRQL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH
RGEQIPLTDEEQATRDALQAEMDGLEETYAEADELPDEVDQRLGEIETALAAFDDRPQAF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
DPDEVARAGAFVSIDGSGVLRVERGYVRPEDELPIASEADVETDPADEDAIAVQAEDDDA
CHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
SAGAESPADEPEEDDGIKPIPDRLMTELTAHRTLALRHTLGENPDIAFVAALHALCLKVF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
YRYAQDTCLELDVKSAGFGAQAPGLADSALAVAFDTRHQAWISALPKEPADLWDGLMSFD
HHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHCC
TDSRQALFAHCVSLSVNAIYEAYNRKPRALAHADRIAQAIDLDMVAAGWTPTIGNYFGRV
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH
TKARILAAVREAKGARAGDRIEHLKKAEMAEQAETLLAGSGWLPEPLRTPGRCVPNVAES
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHH
DVIDSAEAGADAAGAETAADGGETVVVEDEEVTEDVSVALEHHATAAE
HHHCCHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]