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The map label for this gene is yjbJ [H]

Identifier: 154244705

GI number: 154244705

Start: 842956

End: 843717

Strand: Reverse

Name: yjbJ [H]

Synonym: Xaut_0754

Alternate gene names: 154244705

Gene position: 843717-842956 (Counterclockwise)

Preceding gene: 154244706

Following gene: 154244704

Centisome position: 15.89

GC content: 66.01

Gene sequence:

>762_bases
ATGTCCGGCCCGCGCCATCAAACTGTCGTCGGGCGGTCAAGCGCCGTCCGACTGACAGGCTTCCTTCTCCTTTCCGGCCT
GCTCCTCGCCGTGCCGCTCAGTGTCACAGCGAACGCGCAGAATGGACCGGCCAAGCGCACGGCGCCGGCCCATCCGTTCG
CGGCCTACATTGACGAGGCCGCACAGCGTTTCCGCATCCCGGCCGCTTGGATTCGAGCCGTCATGCGCGCTGAAAGCGCC
GGCGACGTGCGCGCGATTTCCTCCGCCGGCGCGATGGGCCTGATGCAGATCATGCCGGATACTTGGGCGGAGCTGCGCGT
CCGCCACAGACTCGAACGTAATCCTTATGATCCGCGCGACAATATCCTGGCCGGCGCAGCGTACTTGCGCGAGATGTATA
ATCGCTACGGTTCGCCGGGCTTTCTCGCGGCCTACAATGCCGGACCAGGGCGATACGAAGAGTATCTCGCGGGCCGCCCG
TTGCCGGCCGAGACCCGAGCGTATGTCGCCGCCTTGCTCCCTTCCTTCGGCGGCGGTGATCTACCCGGCGCAATCACCGT
CGCCACGGCCGATGCTCGCGCTTGGACTCGTGCGCCATTGTTCGTTGCGCGCGATGAGCGCATTGCCGGCGCCGATCCAG
CGCAGACGGAAGGCCGTTCGGAGGACGATCCGGCAGCAACTCCGGTGCGCGAGGCTTCTGCGATCATGCCGCAGTCAGCC
GGCCTATTTGTCGCGCGAACCGTCAGCGGAAAACCGCGATGA

Upstream 100 bases:

>100_bases
CCAGCCGATCCGCGCAAACCTCTTCCAATCCGCCGAGGACAAATCCGCCTGGAGCCTGCACTGGAATCGCCCGCCCAAGC
GCGGCGAACGGGACTGAACG

Downstream 100 bases:

>100_bases
GGTGCCCCGGCCTCTTTCGCAGTCTGGCGTGCGCCGTCGCATCATGGAGTGCGCGGAGGGGGACGCAGGGCAACACAACC
GCACGATTGCCGCCCGTAAT

Product: lytic transglycosylase catalytic

Products: 1,6-Anhydrobond [C]

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSGPRHQTVVGRSSAVRLTGFLLLSGLLLAVPLSVTANAQNGPAKRTAPAHPFAAYIDEAAQRFRIPAAWIRAVMRAESA
GDVRAISSAGAMGLMQIMPDTWAELRVRHRLERNPYDPRDNILAGAAYLREMYNRYGSPGFLAAYNAGPGRYEEYLAGRP
LPAETRAYVAALLPSFGGGDLPGAITVATADARAWTRAPLFVARDERIAGADPAQTEGRSEDDPAATPVREASAIMPQSA
GLFVARTVSGKPR

Sequences:

>Translated_253_residues
MSGPRHQTVVGRSSAVRLTGFLLLSGLLLAVPLSVTANAQNGPAKRTAPAHPFAAYIDEAAQRFRIPAAWIRAVMRAESA
GDVRAISSAGAMGLMQIMPDTWAELRVRHRLERNPYDPRDNILAGAAYLREMYNRYGSPGFLAAYNAGPGRYEEYLAGRP
LPAETRAYVAALLPSFGGGDLPGAITVATADARAWTRAPLFVARDERIAGADPAQTEGRSEDDPAATPVREASAIMPQSA
GLFVARTVSGKPR
>Mature_252_residues
SGPRHQTVVGRSSAVRLTGFLLLSGLLLAVPLSVTANAQNGPAKRTAPAHPFAAYIDEAAQRFRIPAAWIRAVMRAESAG
DVRAISSAGAMGLMQIMPDTWAELRVRHRLERNPYDPRDNILAGAAYLREMYNRYGSPGFLAAYNAGPGRYEEYLAGRPL
PAETRAYVAALLPSFGGGDLPGAITVATADARAWTRAPLFVARDERIAGADPAQTEGRSEDDPAATPVREASAIMPQSAG
LFVARTVSGKPR

Specific function: Murein-Degrading Enzyme. Catalyzes The Cleavage Of The Glycosidic Bonds Between N-Acetylmuramic Acid And N- Acetylglucosamine Residues In Peptidoglycan. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein. Tightly Associated With The Murein Sacculus [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 26998; Mature: 26867

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPRHQTVVGRSSAVRLTGFLLLSGLLLAVPLSVTANAQNGPAKRTAPAHPFAAYIDEA
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHH
AQRFRIPAAWIRAVMRAESAGDVRAISSAGAMGLMQIMPDTWAELRVRHRLERNPYDPRD
HHHHCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCHH
NILAGAAYLREMYNRYGSPGFLAAYNAGPGRYEEYLAGRPLPAETRAYVAALLPSFGGGD
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
LPGAITVATADARAWTRAPLFVARDERIAGADPAQTEGRSEDDPAATPVREASAIMPQSA
CCCEEEEEECCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
GLFVARTVSGKPR
CEEEEEECCCCCC
>Mature Secondary Structure 
SGPRHQTVVGRSSAVRLTGFLLLSGLLLAVPLSVTANAQNGPAKRTAPAHPFAAYIDEA
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHH
AQRFRIPAAWIRAVMRAESAGDVRAISSAGAMGLMQIMPDTWAELRVRHRLERNPYDPRD
HHHHCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCHH
NILAGAAYLREMYNRYGSPGFLAAYNAGPGRYEEYLAGRPLPAETRAYVAALLPSFGGGD
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
LPGAITVATADARAWTRAPLFVARDERIAGADPAQTEGRSEDDPAATPVREASAIMPQSA
CCCEEEEEECCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
GLFVARTVSGKPR
CEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]