Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154244703
Identifier: 154244703
GI number: 154244703
Start: 839381
End: 841258
Strand: Reverse
Name: 154244703
Synonym: Xaut_0752
Alternate gene names: NA
Gene position: 841258-839381 (Counterclockwise)
Preceding gene: 154244704
Following gene: 154244702
Centisome position: 15.85
GC content: 66.29
Gene sequence:
>1878_bases ATGTGCGCCTTGGTTCGGTTGTGCTTTTTCAAGGGCTTACGCAGTGAATTCGCGAGGTGCGCCTTACCGGCGCAGACTGC GGCTTCCGCGATTCTCCAAGATTATCCGCGCGATGGCGCGATGTGCGACCGCGCGCGCATGAGCAGCGAGGACGATTTCC GTATCCGGCCAGGCCGTATCCGCTCAACGAGCGCGCAACGCGCCCGACCGTTCATTGCCCAGGCACTCGCTGCCGCCCAG CGCGCCGGCGGCTCCGTCTCGCGCAAGGGCACGATCGGGCCAGGCCACCGTTCTCGGTTCGGCCAGGGTCAGCGCGCGTC GGTGCAGGCCAACCGGCTCATCAACTCCCACTCACGCGGCACCGTCGTCAAAGCGCGTGTGGTCCGCCACGGCGGACGCA ATGCGCCACTCGACACTCACCTCAATTATCTGCGCCGCGAGGGCGTCACCCGGGACGGAGAGAGGGCCCGGCTGTTCGGG CCTGGCGCCGACGACGCCGACTCGAAGGCGTTCGCGGAGCGGTGCGAGAATGACCGGCATCATTTCCGGTTCATCGTATC GCCCGACGACGCCGTGGAGATGGCGGACCTCAAGACTTTCGCCCGCGATTTGGTCGGGCAGATGGAAAAGGACCTCGGCA CCCAGCTCGATTGGGTCGCCGTCGATCACTGGAACACCGAACATCCGCACGTCCACCTAATCGTGCGCGGTGTGCGCGAG GATGGCGAGAACCTCGTCATCTCCCGCGACTACATCAAGGAAGGCATGCGCGATCGGGCACGGGATCTGATCACCCAAGA ACTCGGACCGCGCACCGACCATGAAATCCGCCGCACGCTCGAACGCCAGATCGAGACCGAGCGCTGGACCAATCTTGATC GGCAGCTCGCCCGAGACAGCTACCGCACCGGTGTCGTCGACCTCGCGCCGCGGCCCGACCACCAGCCCGACGAATTTCAT ACGCTCAAAGTCGGACGCCTGCGAAAGCTTGGGTCCCTCGGCCTGGCCGACCAAATCGGTCCCGGCCAGTGGGCGATTTC GGAGAACGCCGAAACGACGCTGCGCCAGCTCGGTGAACGCGGCGACATCATCAAGCGCATCCATCGCGGTCTGACCGAAC ACGGCATCGAACGCGGTGCGTCCAACTATGTGCTCGCCGGGGAAAGCCTGGACGATCCTGTGGTCGGTCGGCTGGTCGCC CGCGGTCTCGACGATGAGCTGACGGGTACAGCCTATGCCGTGGTCGACGGCACGGACGGCCGCACCCATCACATCAAGCT GCCCGACCTCGACGCCGCCGGCGACAGCGCACCCGGCTCGATCGTCGAGCTGCGCAGGTTCGACGACGCGAAGGGACAGC GTCGCGTCGCGATGGCAGTCCGGTCGGACCTCACCATCGAGCAGCAGATCACGGCGAAAGGTGCGACTTGGCTTGATAGA CAGTCGATCGCCCGCGAGCCGATTGCGCTCGGCGGCGGGGGCTTCGGCGCGGAGGTGCGCGAAGCCCTGGACCGGCGCGC CGAACACCTGATTGGGCAAGGTCTGGCCGAACGTCAGAACCGCGGCGTCAGCTTCAGCCGCAACCTGATCGAAACGCTGC GCCGACGCGAATTGGATGCCGTCGGCGCGAAGCTCGCGGCAGAGAGCGGCCGCCCATTCAATAAGGCCGCAGCGGGGGAA TATGTCGCTGGCGCCTACCAGCGGCGCATCGCACTCGCCTCCGGTCGCTTCGCGATGATCGATGACGGCCTTGGCTTCCA GCTCGTGCCCTGGTCCCCCTCACTCGAAAAACAGCTTGGCCGTCATGTCTCCGGCCTCGCCCGAGGCGACGGCGGCATCG ATTGGAGCTTCGGCCGCAAGCGGGGGCTGGGCCTGTGA
Upstream 100 bases:
>100_bases CGAACAGCATAGTATATTCTCGCATCGGGAAGGATGAACGACGATGTCCGCAAGAGCAGTGGAAATACGACCGATTAGGA GGGCAGGATAAAGGGGCGCG
Downstream 100 bases:
>100_bases ACCGCGGCCTCATCAAGAAAGGACTCCGCTATGTCGGCCACCAAAATCCTCTGGGGCCAAATCCTTGTCGTCTCCCTGAT TGTGCTCGCGACCACCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MCALVRLCFFKGLRSEFARCALPAQTAASAILQDYPRDGAMCDRARMSSEDDFRIRPGRIRSTSAQRARPFIAQALAAAQ RAGGSVSRKGTIGPGHRSRFGQGQRASVQANRLINSHSRGTVVKARVVRHGGRNAPLDTHLNYLRREGVTRDGERARLFG PGADDADSKAFAERCENDRHHFRFIVSPDDAVEMADLKTFARDLVGQMEKDLGTQLDWVAVDHWNTEHPHVHLIVRGVRE DGENLVISRDYIKEGMRDRARDLITQELGPRTDHEIRRTLERQIETERWTNLDRQLARDSYRTGVVDLAPRPDHQPDEFH TLKVGRLRKLGSLGLADQIGPGQWAISENAETTLRQLGERGDIIKRIHRGLTEHGIERGASNYVLAGESLDDPVVGRLVA RGLDDELTGTAYAVVDGTDGRTHHIKLPDLDAAGDSAPGSIVELRRFDDAKGQRRVAMAVRSDLTIEQQITAKGATWLDR QSIAREPIALGGGGFGAEVREALDRRAEHLIGQGLAERQNRGVSFSRNLIETLRRRELDAVGAKLAAESGRPFNKAAAGE YVAGAYQRRIALASGRFAMIDDGLGFQLVPWSPSLEKQLGRHVSGLARGDGGIDWSFGRKRGLGL
Sequences:
>Translated_625_residues MCALVRLCFFKGLRSEFARCALPAQTAASAILQDYPRDGAMCDRARMSSEDDFRIRPGRIRSTSAQRARPFIAQALAAAQ RAGGSVSRKGTIGPGHRSRFGQGQRASVQANRLINSHSRGTVVKARVVRHGGRNAPLDTHLNYLRREGVTRDGERARLFG PGADDADSKAFAERCENDRHHFRFIVSPDDAVEMADLKTFARDLVGQMEKDLGTQLDWVAVDHWNTEHPHVHLIVRGVRE DGENLVISRDYIKEGMRDRARDLITQELGPRTDHEIRRTLERQIETERWTNLDRQLARDSYRTGVVDLAPRPDHQPDEFH TLKVGRLRKLGSLGLADQIGPGQWAISENAETTLRQLGERGDIIKRIHRGLTEHGIERGASNYVLAGESLDDPVVGRLVA RGLDDELTGTAYAVVDGTDGRTHHIKLPDLDAAGDSAPGSIVELRRFDDAKGQRRVAMAVRSDLTIEQQITAKGATWLDR QSIAREPIALGGGGFGAEVREALDRRAEHLIGQGLAERQNRGVSFSRNLIETLRRRELDAVGAKLAAESGRPFNKAAAGE YVAGAYQRRIALASGRFAMIDDGLGFQLVPWSPSLEKQLGRHVSGLARGDGGIDWSFGRKRGLGL >Mature_625_residues MCALVRLCFFKGLRSEFARCALPAQTAASAILQDYPRDGAMCDRARMSSEDDFRIRPGRIRSTSAQRARPFIAQALAAAQ RAGGSVSRKGTIGPGHRSRFGQGQRASVQANRLINSHSRGTVVKARVVRHGGRNAPLDTHLNYLRREGVTRDGERARLFG PGADDADSKAFAERCENDRHHFRFIVSPDDAVEMADLKTFARDLVGQMEKDLGTQLDWVAVDHWNTEHPHVHLIVRGVRE DGENLVISRDYIKEGMRDRARDLITQELGPRTDHEIRRTLERQIETERWTNLDRQLARDSYRTGVVDLAPRPDHQPDEFH TLKVGRLRKLGSLGLADQIGPGQWAISENAETTLRQLGERGDIIKRIHRGLTEHGIERGASNYVLAGESLDDPVVGRLVA RGLDDELTGTAYAVVDGTDGRTHHIKLPDLDAAGDSAPGSIVELRRFDDAKGQRRVAMAVRSDLTIEQQITAKGATWLDR QSIAREPIALGGGGFGAEVREALDRRAEHLIGQGLAERQNRGVSFSRNLIETLRRRELDAVGAKLAAESGRPFNKAAAGE YVAGAYQRRIALASGRFAMIDDGLGFQLVPWSPSLEKQLGRHVSGLARGDGGIDWSFGRKRGLGL
Specific function: Unknown
COG id: COG3843
COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69027; Mature: 69027
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCALVRLCFFKGLRSEFARCALPAQTAASAILQDYPRDGAMCDRARMSSEDDFRIRPGRI CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEECCCCC RSTSAQRARPFIAQALAAAQRAGGSVSRKGTIGPGHRSRFGQGQRASVQANRLINSHSRG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCC TVVKARVVRHGGRNAPLDTHLNYLRREGVTRDGERARLFGPGADDADSKAFAERCENDRH CHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCC HFRFIVSPDDAVEMADLKTFARDLVGQMEKDLGTQLDWVAVDHWNTEHPHVHLIVRGVRE EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEEEHHC DGENLVISRDYIKEGMRDRARDLITQELGPRTDHEIRRTLERQIETERWTNLDRQLARDS CCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRTGVVDLAPRPDHQPDEFHTLKVGRLRKLGSLGLADQIGPGQWAISENAETTLRQLGER HHCCCEECCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHCC GDIIKRIHRGLTEHGIERGASNYVLAGESLDDPVVGRLVARGLDDELTGTAYAVVDGTDG CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCC RTHHIKLPDLDAAGDSAPGSIVELRRFDDAKGQRRVAMAVRSDLTIEQQITAKGATWLDR CEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCHHHH QSIAREPIALGGGGFGAEVREALDRRAEHLIGQGLAERQNRGVSFSRNLIETLRRRELDA HHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VGAKLAAESGRPFNKAAAGEYVAGAYQRRIALASGRFAMIDDGLGFQLVPWSPSLEKQLG HHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCHHHHHH RHVSGLARGDGGIDWSFGRKRGLGL HHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MCALVRLCFFKGLRSEFARCALPAQTAASAILQDYPRDGAMCDRARMSSEDDFRIRPGRI CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEECCCCC RSTSAQRARPFIAQALAAAQRAGGSVSRKGTIGPGHRSRFGQGQRASVQANRLINSHSRG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCC TVVKARVVRHGGRNAPLDTHLNYLRREGVTRDGERARLFGPGADDADSKAFAERCENDRH CHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCC HFRFIVSPDDAVEMADLKTFARDLVGQMEKDLGTQLDWVAVDHWNTEHPHVHLIVRGVRE EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEEEHHC DGENLVISRDYIKEGMRDRARDLITQELGPRTDHEIRRTLERQIETERWTNLDRQLARDS CCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRTGVVDLAPRPDHQPDEFHTLKVGRLRKLGSLGLADQIGPGQWAISENAETTLRQLGER HHCCCEECCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHCC GDIIKRIHRGLTEHGIERGASNYVLAGESLDDPVVGRLVARGLDDELTGTAYAVVDGTDG CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCC RTHHIKLPDLDAAGDSAPGSIVELRRFDDAKGQRRVAMAVRSDLTIEQQITAKGATWLDR CEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCHHHH QSIAREPIALGGGGFGAEVREALDRRAEHLIGQGLAERQNRGVSFSRNLIETLRRRELDA HHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VGAKLAAESGRPFNKAAAGEYVAGAYQRRIALASGRFAMIDDGLGFQLVPWSPSLEKQLG HHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCHHHHHH RHVSGLARGDGGIDWSFGRKRGLGL HHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA