Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154244696
Identifier: 154244696
GI number: 154244696
Start: 831955
End: 832716
Strand: Reverse
Name: 154244696
Synonym: Xaut_0745
Alternate gene names: NA
Gene position: 832716-831955 (Counterclockwise)
Preceding gene: 154244697
Following gene: 154244695
Centisome position: 15.69
GC content: 65.75
Gene sequence:
>762_bases ATGATCTTCCGTCGCTCATGCGCGGCGCTTCTTTCCGCGTCGATCCTTTCTGTCCCCGTGACGATGTCGTCAGTGATGGT CCAGCCCGCGTCCGCGCAATGGATCGTCTACGACCCGACGAACTACGTGCAGAATGTTCTCTCCGCGGCTCGCGCCCTGG AGCAGATCAACAACCAGATCACCTCGCTTCAGAATGAAGCAACGATGCTGATCAACCAGGCGCGCAATCTCGCGAGCCTG CCTTACACCTCGCTTCAGCGCCTGCAGCAGTCCGTGCAGCGGACGCAACAACTCCTCGGCCAGGCGCAGCGCATCGCCTA CGACGTCCAGCAGATCGACCAGGCGTTCACGTCCACCTACGGAAACGCGTCGCTCTCGGCATCGGACCAGCAGCTCGTCG CGCAAGCGCGCGAGCGCTGGCAGAACACCGTCGGCGGTCTGCAGGACGCCATGCGCGTGCAGGCAGGCGTCGTCGGCAAC ATCGAGACCAACCGCGCCGAGATGTCGGCGCTCATCGGCCAAAGCCAGGGCGCAACCGGCGCCTTGCAGGCGTCGCAGGC CGGCAATCAGCTCCTCGCCCTCCAAGCCCAGCAGCTCGCCGATCTTACGGCCGTCGTCGCCGCGAACGGTCGGGCACAAG CGTTGTCCGAAGCGGAGCGCGCTGCGGCTGCCGAACAGGGTCGCGAGCAGCGCCGCCGCTTCCTGTCCCCCGGCAGCGCC TATCAGCCCGGCAACGCCCGCATGTTCCCGAATGGCAACTAA
Upstream 100 bases:
>100_bases AGCACGGCCGCGAAGGTTTCCTGCCGGCCTGGCTGCGTCTGCGCGGCGTCGCCTGGGCCGCTGACCTCATCCCCAACCTC AATAACCTGGAGACCCAGCC
Downstream 100 bases:
>100_bases GGCCCCTCGCGAGGATCAGGTCATGGATGGCAAGCTTTTAGCCCGCCTCGGCGCCATCGTCTTCGTCGCCGTCGCCATCA CCGCCACGGCGATCGAGATG
Product: conjugal transfer protein TrbJ
Products: NA
Alternate protein names: P-Type Conjugative Transfer Protein TrbJ; Conjugal Transfer TrbJ Signal Peptide Protein; Conjugal Transfer Protein Trbj; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbj; Conjugative Transfer Protein TrbJ
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MIFRRSCAALLSASILSVPVTMSSVMVQPASAQWIVYDPTNYVQNVLSAARALEQINNQITSLQNEATMLINQARNLASL PYTSLQRLQQSVQRTQQLLGQAQRIAYDVQQIDQAFTSTYGNASLSASDQQLVAQARERWQNTVGGLQDAMRVQAGVVGN IETNRAEMSALIGQSQGATGALQASQAGNQLLALQAQQLADLTAVVAANGRAQALSEAERAAAAEQGREQRRRFLSPGSA YQPGNARMFPNGN
Sequences:
>Translated_253_residues MIFRRSCAALLSASILSVPVTMSSVMVQPASAQWIVYDPTNYVQNVLSAARALEQINNQITSLQNEATMLINQARNLASL PYTSLQRLQQSVQRTQQLLGQAQRIAYDVQQIDQAFTSTYGNASLSASDQQLVAQARERWQNTVGGLQDAMRVQAGVVGN IETNRAEMSALIGQSQGATGALQASQAGNQLLALQAQQLADLTAVVAANGRAQALSEAERAAAAEQGREQRRRFLSPGSA YQPGNARMFPNGN >Mature_253_residues MIFRRSCAALLSASILSVPVTMSSVMVQPASAQWIVYDPTNYVQNVLSAARALEQINNQITSLQNEATMLINQARNLASL PYTSLQRLQQSVQRTQQLLGQAQRIAYDVQQIDQAFTSTYGNASLSASDQQLVAQARERWQNTVGGLQDAMRVQAGVVGN IETNRAEMSALIGQSQGATGALQASQAGNQLLALQAQQLADLTAVVAANGRAQALSEAERAAAAEQGREQRRRFLSPGSA YQPGNARMFPNGN
Specific function: Unknown
COG id: COG5314
COG function: function code U; Conjugal transfer/entry exclusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27208; Mature: 27208
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFRRSCAALLSASILSVPVTMSSVMVQPASAQWIVYDPTNYVQNVLSAARALEQINNQI CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH TSLQNEATMLINQARNLASLPYTSLQRLQQSVQRTQQLLGQAQRIAYDVQQIDQAFTSTY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GNASLSASDQQLVAQARERWQNTVGGLQDAMRVQAGVVGNIETNRAEMSALIGQSQGATG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCH ALQASQAGNQLLALQAQQLADLTAVVAANGRAQALSEAERAAAAEQGREQRRRFLSPGSA HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YQPGNARMFPNGN CCCCCCCCCCCCC >Mature Secondary Structure MIFRRSCAALLSASILSVPVTMSSVMVQPASAQWIVYDPTNYVQNVLSAARALEQINNQI CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH TSLQNEATMLINQARNLASLPYTSLQRLQQSVQRTQQLLGQAQRIAYDVQQIDQAFTSTY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GNASLSASDQQLVAQARERWQNTVGGLQDAMRVQAGVVGNIETNRAEMSALIGQSQGATG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCH ALQASQAGNQLLALQAQQLADLTAVVAANGRAQALSEAERAAAAEQGREQRRRFLSPGSA HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YQPGNARMFPNGN CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA