Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154244670
Identifier: 154244670
GI number: 154244670
Start: 804811
End: 805851
Strand: Reverse
Name: 154244670
Synonym: Xaut_0719
Alternate gene names: NA
Gene position: 805851-804811 (Counterclockwise)
Preceding gene: 154244671
Following gene: 154244669
Centisome position: 15.18
GC content: 66.76
Gene sequence:
>1041_bases ATGTCCCGTCTCGACGCCACCGATCTCGCGCAGCGGCTCGGCCGTCAGGCCGAGGCGGTGTGCCGCGCCTATCTTTCGAA CGGGCGCAAGCAGGGCAATTACTGGCAGGTCGGCGATGTCCGCAACGCCGCTGGCCGCTCGATGTTCGTGCGATTGCACG ACACCGCCAAAGGTGTCGCCGGGAAATGGCAAGACCCGGCCACCGGCGAGCATGGCGACCTGCTCGACGTGATCCGGGAA TCCCTCGGCCTGAGCGACTTCGCGGATGTGGCCGAGGAGGCCCGGCGGTTCCTCAGCCTGCCGCATCCCGAGCCGGAGCA CATCGCAGGTCGATCCCGGACACCACCGGCGCCATCGGGTTCATCCGAGGCGGCGCGCAGACTCTGGCGCATGACCCGGC CGATCATGGGCAGTGTCGCGGAATCGTATTTGCGCAAACGCGGGATTACGGATTTACGTGGAACCGCAAACCTGCGCTTT CATCCGAACTGCTACTGGCGGCCCGAGGGCGATGGGCCGACCGAGACCTGGCCCGCGATGATCGCCGCCGTCACCGACCT CGAAGGTCGGATCACCGGCGTACACCGCTCCTGGCTCAGACCCGACGGCTCCGGCAAGGCCCCTGTCGATCCACCGCGCA AGGCGATGGGCGATCTGCTCGGCAACGCCGTCCGCTTCGGCGATGCCAAAGTTGTCATGGCGGCGGGGGAGGGCATCGAG ACCATATTGTCCCTGCGGCAGGCCTTGCCCCCGATGCCGATGGTGTCCGCACTCTCTGCCGGGCATCTCGCCGCCATCCT GTTTCCGGCCAATTTGCGCAGGCTCTATATCGTCCGCGACAACGATCCGGCAGGTGACGGCGCGCGGGATAGTCTTGTCG ACCGGGCACGCGAGGCTGGGATCGAGGCGATCACGCTCTCGCCCATGCTGGGGGACTTCAACGAAGATCTCGTCATGCGC GGGCTGACTGCGCTTCGGGCGGAGGTGCGGGTGCAACTCGCACCCGAGGACGTCAGCCGCTTCATGGTCCTCGCTGCATA G
Upstream 100 bases:
>100_bases TGCGCTTCTTCGTGCCGGTGGGCGCATCCGGGCCGGAGATTACGGCCAGGCTCCTCGACCGCTTCCCGGTCGAGCGCATC GGTGAGCGGGTGGCCGCGTA
Downstream 100 bases:
>100_bases CCGGGAAGGGGGTGTGATCGGGCGGGTTCCGGCTTGTCATGGGCATATTGGACTGCACCCCCACGGCCAGGGGACCACGC CTCGGCCTTCGAGAGGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Related Protein; Phage Related Helicase; Plasmid-Related Protein; P-Loop ATPase And Inactivated Derivative; Genomic Island Protein; Helicase Domain Protein; Conjugative Transfer Protein TraI
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MSRLDATDLAQRLGRQAEAVCRAYLSNGRKQGNYWQVGDVRNAAGRSMFVRLHDTAKGVAGKWQDPATGEHGDLLDVIRE SLGLSDFADVAEEARRFLSLPHPEPEHIAGRSRTPPAPSGSSEAARRLWRMTRPIMGSVAESYLRKRGITDLRGTANLRF HPNCYWRPEGDGPTETWPAMIAAVTDLEGRITGVHRSWLRPDGSGKAPVDPPRKAMGDLLGNAVRFGDAKVVMAAGEGIE TILSLRQALPPMPMVSALSAGHLAAILFPANLRRLYIVRDNDPAGDGARDSLVDRAREAGIEAITLSPMLGDFNEDLVMR GLTALRAEVRVQLAPEDVSRFMVLAA
Sequences:
>Translated_346_residues MSRLDATDLAQRLGRQAEAVCRAYLSNGRKQGNYWQVGDVRNAAGRSMFVRLHDTAKGVAGKWQDPATGEHGDLLDVIRE SLGLSDFADVAEEARRFLSLPHPEPEHIAGRSRTPPAPSGSSEAARRLWRMTRPIMGSVAESYLRKRGITDLRGTANLRF HPNCYWRPEGDGPTETWPAMIAAVTDLEGRITGVHRSWLRPDGSGKAPVDPPRKAMGDLLGNAVRFGDAKVVMAAGEGIE TILSLRQALPPMPMVSALSAGHLAAILFPANLRRLYIVRDNDPAGDGARDSLVDRAREAGIEAITLSPMLGDFNEDLVMR GLTALRAEVRVQLAPEDVSRFMVLAA >Mature_345_residues SRLDATDLAQRLGRQAEAVCRAYLSNGRKQGNYWQVGDVRNAAGRSMFVRLHDTAKGVAGKWQDPATGEHGDLLDVIRES LGLSDFADVAEEARRFLSLPHPEPEHIAGRSRTPPAPSGSSEAARRLWRMTRPIMGSVAESYLRKRGITDLRGTANLRFH PNCYWRPEGDGPTETWPAMIAAVTDLEGRITGVHRSWLRPDGSGKAPVDPPRKAMGDLLGNAVRFGDAKVVMAAGEGIET ILSLRQALPPMPMVSALSAGHLAAILFPANLRRLYIVRDNDPAGDGARDSLVDRAREAGIEAITLSPMLGDFNEDLVMRG LTALRAEVRVQLAPEDVSRFMVLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37684; Mature: 37553
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLDATDLAQRLGRQAEAVCRAYLSNGRKQGNYWQVGDVRNAAGRSMFVRLHDTAKGVA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEEEEECHHCCCC GKWQDPATGEHGDLLDVIRESLGLSDFADVAEEARRFLSLPHPEPEHIAGRSRTPPAPSG CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCC SSEAARRLWRMTRPIMGSVAESYLRKRGITDLRGTANLRFHPNCYWRPEGDGPTETWPAM CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEECCCCCCCCHHHHHH IAAVTDLEGRITGVHRSWLRPDGSGKAPVDPPRKAMGDLLGNAVRFGDAKVVMAAGEGIE HHHHHHCCCCEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHH TILSLRQALPPMPMVSALSAGHLAAILFPANLRRLYIVRDNDPAGDGARDSLVDRAREAG HHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCC IEAITLSPMLGDFNEDLVMRGLTALRAEVRVQLAPEDVSRFMVLAA CCEEEECCHHCCCCHHHHHHHHHHHHHHHEEEECHHHHHHEEHCCC >Mature Secondary Structure SRLDATDLAQRLGRQAEAVCRAYLSNGRKQGNYWQVGDVRNAAGRSMFVRLHDTAKGVA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEEEEECHHCCCC GKWQDPATGEHGDLLDVIRESLGLSDFADVAEEARRFLSLPHPEPEHIAGRSRTPPAPSG CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCC SSEAARRLWRMTRPIMGSVAESYLRKRGITDLRGTANLRFHPNCYWRPEGDGPTETWPAM CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEECCCCCCCCHHHHHH IAAVTDLEGRITGVHRSWLRPDGSGKAPVDPPRKAMGDLLGNAVRFGDAKVVMAAGEGIE HHHHHHCCCCEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHH TILSLRQALPPMPMVSALSAGHLAAILFPANLRRLYIVRDNDPAGDGARDSLVDRAREAG HHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCC IEAITLSPMLGDFNEDLVMRGLTALRAEVRVQLAPEDVSRFMVLAA CCEEEECCHHCCCCHHHHHHHHHHHHHHHEEEECHHHHHHEEHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA