Click here to switch to the map view.

The map label for this gene is traG [H]

Identifier: 154244652

GI number: 154244652

Start: 790062

End: 792047

Strand: Reverse

Name: traG [H]

Synonym: Xaut_0701

Alternate gene names: 154244652

Gene position: 792047-790062 (Counterclockwise)

Preceding gene: 154244653

Following gene: 154244651

Centisome position: 14.92

GC content: 63.04

Gene sequence:

>1986_bases
ATGTCCGCGACGAAAATTCTCTGGGGCCAGATCATCACCGTGTTTCTGATCGTCCTCGTCACGACATGGACGGCGACACA
ATACGTGGCATGGGAGCTCGGGTTTCAGGCGCAGCTCGGGTCGCCATGGTTCCGGGTCGGCGGCTGGCCGGTCTATTATC
CGCCCGCGATCTTCTGGTGGTGGTATTTCTATGAAGCCTATGCACCTGGCATCTTTGCCACGGGTGGGATGATCGCGGCG
TCGGGCGGATTCATCGCCATTGCCGTCGCGATTCTCATGTCGGTCTGGCGAGCGCGGGAGGCAAAGAACGCGGAGACCTA
TGGTTCCGCCCGATGGGCGCGACCCGATGAAGTCAAGGCCGCGGGACTTCTCGATCCCGATGGTGTCGTGCTTGGGCGCT
TCGATCGTGCCTATCTTCGTCACGACGGGCCGGAGCATGTCCTGTGTTTCGCGCCGACACGGTCGGGCAAAGGCGTCGGC
CTGGTGGTGCCCACGCTCCTGACCTGGCCAGGGTCGGCGATCGTCCATGACATCAAGGGTGAGAACTGGCAGCTCACAGC
GGGCTTTCGCGCCCGGCACGGCAGGGTGCTTCTGTTCGATCCGACCAATCCGGATTCGTCGGCCTATAATCCGCTGCTCG
AGGTTCGGCGCGGTGAATGGGAGGTCCGCGACGTCCAGAACATCGCCGATATCCTGGTCGATCCCGAAGGCAGTCTTGAG
CGGCGCAATCACTGGGAAAAGACCAGTCATGCCTTGCTGGTCGGGGCCATCCTGCATGTCCTCTATGCCGAACCCGACAA
GACCCTTGCTGGCGTGGCCTCGTTCCTCTCCGACCCGAGGCGCACGATCGAAGCGACACTCGACGCGATGATGAAAACCG
CGCATCTCGGAGAAGCTGGCCCGCATCCTGTCATCGCCAGCGCGGCGCGCGAACTCCTGAACAAATCCGACAATGAGCGC
TCAGGCGTGCTCTCCACCGCCATGTCGTTCCTCGGTCTCTACCGCGATCCCGTCGTCGCCGAGGTGACGCGCCGATGCGA
CTGGCGTATTGCCGACCTTGTCGCGGGCGAAATACCGACGACGCTCTACCTCGTCGTGCCACCGTCCGACATCAATCGGA
CCAAGCCCCTTGTCCGCCTCATTCTCAATCAGGTCGGGCGTCGCCTGACCGAAGATTTGCAGACCAAGCCGGGGCGGCAT
CGGCTCCTGCTCATGCTCGACGAATTTCCGGCTCTCGGTCGGCTGGACTTCTTCGAGAGCGCCCTGGCCTTCATGGCGGG
CTACGGTCTCAAGAGCTTCCTGATCGCCCAGTCTCTGAACCAGATCGAGAAAGCCTACGGCCCAAACAATTCGATCCTCG
ACAATTGCCATGTGCGCGTGAGCTTCGCCACCAACGACGAGCGAACGGCCAAGCGCGTGTCCGATGCGCTCGGCACGGCA
ACCGAAATGAAGGCGATGAAGAACTATGCCGGCCACAGGCTTTCGCCCTGGCTCGGGCACCTGATGGTCTCCCGCTCCGA
GACGGCGCGCCAGTTGCTCACGCCGGGTGAAATCATGCAACTTCCGCCCTCCGACGAGATCGTCATGGTGGCGGGCACCC
CGCCGATCCGCGCGAAGAAGGCCCGCTATTTCGAGGATGTGCGCTTCAAGGAGCGTGTCCTCGCTCCCCCGGAACTGGTC
CGATCCGACAAGCCGCAGCCCGACGATTGGAGCGCCTTGCCGGCGCCGCAACGTCCGCCGTTCGACAAGGCCACGAACAC
GTCCGGCGATCCGGATGAGGATCCGACCGGCTCCGAGCGCCGACATCAGCCTGAGCTGAGCCATGCCAATCCGATCGAGA
AGAGGAAGCCGATCGAGAACGAGTTCGATCCGCCTGATGAGGACGGTGAGGACGATGCAACCCGCAGCCGGCGCCTCACG
CAGGTGATGGGGCTGAACGTGGCGCGTCAGGTGAGCATGGATCCCGGTGACGGGATGGACCTCTGA

Upstream 100 bases:

>100_bases
CCGCCACGTCTCGGGCGTCGCGCGGGGCGACGGCGGCGTCGACTGGAGCTTCGGCCGCAAACGGGGCCTCGGGCTCTGAC
ATTCAAAGGAAGGAACCACC

Downstream 100 bases:

>100_bases
TCGCCATGACCGCACGCAAGAAGAAATCTCCCGTCTCCGTCTATCTCGACCCCGAGATCCTGGCGATGTTGGCGGAATTC
GCTGCGCGCCGTGGTCAGTC

Product: conjugal transfer coupling protein TraG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 661; Mature: 660

Protein sequence:

>661_residues
MSATKILWGQIITVFLIVLVTTWTATQYVAWELGFQAQLGSPWFRVGGWPVYYPPAIFWWWYFYEAYAPGIFATGGMIAA
SGGFIAIAVAILMSVWRAREAKNAETYGSARWARPDEVKAAGLLDPDGVVLGRFDRAYLRHDGPEHVLCFAPTRSGKGVG
LVVPTLLTWPGSAIVHDIKGENWQLTAGFRARHGRVLLFDPTNPDSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLE
RRNHWEKTSHALLVGAILHVLYAEPDKTLAGVASFLSDPRRTIEATLDAMMKTAHLGEAGPHPVIASAARELLNKSDNER
SGVLSTAMSFLGLYRDPVVAEVTRRCDWRIADLVAGEIPTTLYLVVPPSDINRTKPLVRLILNQVGRRLTEDLQTKPGRH
RLLLMLDEFPALGRLDFFESALAFMAGYGLKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTA
TEMKAMKNYAGHRLSPWLGHLMVSRSETARQLLTPGEIMQLPPSDEIVMVAGTPPIRAKKARYFEDVRFKERVLAPPELV
RSDKPQPDDWSALPAPQRPPFDKATNTSGDPDEDPTGSERRHQPELSHANPIEKRKPIENEFDPPDEDGEDDATRSRRLT
QVMGLNVARQVSMDPGDGMDL

Sequences:

>Translated_661_residues
MSATKILWGQIITVFLIVLVTTWTATQYVAWELGFQAQLGSPWFRVGGWPVYYPPAIFWWWYFYEAYAPGIFATGGMIAA
SGGFIAIAVAILMSVWRAREAKNAETYGSARWARPDEVKAAGLLDPDGVVLGRFDRAYLRHDGPEHVLCFAPTRSGKGVG
LVVPTLLTWPGSAIVHDIKGENWQLTAGFRARHGRVLLFDPTNPDSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLE
RRNHWEKTSHALLVGAILHVLYAEPDKTLAGVASFLSDPRRTIEATLDAMMKTAHLGEAGPHPVIASAARELLNKSDNER
SGVLSTAMSFLGLYRDPVVAEVTRRCDWRIADLVAGEIPTTLYLVVPPSDINRTKPLVRLILNQVGRRLTEDLQTKPGRH
RLLLMLDEFPALGRLDFFESALAFMAGYGLKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTA
TEMKAMKNYAGHRLSPWLGHLMVSRSETARQLLTPGEIMQLPPSDEIVMVAGTPPIRAKKARYFEDVRFKERVLAPPELV
RSDKPQPDDWSALPAPQRPPFDKATNTSGDPDEDPTGSERRHQPELSHANPIEKRKPIENEFDPPDEDGEDDATRSRRLT
QVMGLNVARQVSMDPGDGMDL
>Mature_660_residues
SATKILWGQIITVFLIVLVTTWTATQYVAWELGFQAQLGSPWFRVGGWPVYYPPAIFWWWYFYEAYAPGIFATGGMIAAS
GGFIAIAVAILMSVWRAREAKNAETYGSARWARPDEVKAAGLLDPDGVVLGRFDRAYLRHDGPEHVLCFAPTRSGKGVGL
VVPTLLTWPGSAIVHDIKGENWQLTAGFRARHGRVLLFDPTNPDSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLER
RNHWEKTSHALLVGAILHVLYAEPDKTLAGVASFLSDPRRTIEATLDAMMKTAHLGEAGPHPVIASAARELLNKSDNERS
GVLSTAMSFLGLYRDPVVAEVTRRCDWRIADLVAGEIPTTLYLVVPPSDINRTKPLVRLILNQVGRRLTEDLQTKPGRHR
LLLMLDEFPALGRLDFFESALAFMAGYGLKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTAT
EMKAMKNYAGHRLSPWLGHLMVSRSETARQLLTPGEIMQLPPSDEIVMVAGTPPIRAKKARYFEDVRFKERVLAPPELVR
SDKPQPDDWSALPAPQRPPFDKATNTSGDPDEDPTGSERRHQPELSHANPIEKRKPIENEFDPPDEDGEDDATRSRRLTQ
VMGLNVARQVSMDPGDGMDL

Specific function: Required for conjugative transfer of plasmid RP4. Binds tightly and specifically to the relaxase traI. Can also bind to DNA without sequence specificity. May form a pore-like structure that could serve as a channel for DNA transfer [H]

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virD4/traG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003688 [H]

Pfam domain/function: PF02534 TraG [H]

EC number: NA

Molecular weight: Translated: 73506; Mature: 73374

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATKILWGQIITVFLIVLVTTWTATQYVAWELGFQAQLGSPWFRVGGWPVYYPPAIFWW
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCEEECCCCCEECCHHHHHH
WYFYEAYAPGIFATGGMIAASGGFIAIAVAILMSVWRAREAKNAETYGSARWARPDEVKA
HHHHHHHCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCC
AGLLDPDGVVLGRFDRAYLRHDGPEHVLCFAPTRSGKGVGLVVPTLLTWPGSAIVHDIKG
CCCCCCCCEEEECCHHHHHHCCCCCEEEEEECCCCCCCCEEEHHHHHHCCCCCEEEECCC
ENWQLTAGFRARHGRVLLFDPTNPDSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLE
CCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHH
RRNHWEKTSHALLVGAILHVLYAEPDKTLAGVASFLSDPRRTIEATLDAMMKTAHLGEAG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCC
PHPVIASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAEVTRRCDWRIADLVAGEIPT
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHCCCCC
TLYLVVPPSDINRTKPLVRLILNQVGRRLTEDLQTKPGRHRLLLMLDEFPALGRLDFFES
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH
ALAFMAGYGLKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTA
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCHH
TEMKAMKNYAGHRLSPWLGHLMVSRSETARQLLTPGEIMQLPPSDEIVMVAGTPPIRAKK
HHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHCCCCCEEECCCCCCEEEEECCCCCCHHH
ARYFEDVRFKERVLAPPELVRSDKPQPDDWSALPAPQRPPFDKATNTSGDPDEDPTGSER
HHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RHQPELSHANPIEKRKPIENEFDPPDEDGEDDATRSRRLTQVMGLNVARQVSMDPGDGMD
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHEECCCCCCCCC
L
C
>Mature Secondary Structure 
SATKILWGQIITVFLIVLVTTWTATQYVAWELGFQAQLGSPWFRVGGWPVYYPPAIFWW
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCEEECCCCCEECCHHHHHH
WYFYEAYAPGIFATGGMIAASGGFIAIAVAILMSVWRAREAKNAETYGSARWARPDEVKA
HHHHHHHCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCC
AGLLDPDGVVLGRFDRAYLRHDGPEHVLCFAPTRSGKGVGLVVPTLLTWPGSAIVHDIKG
CCCCCCCCEEEECCHHHHHHCCCCCEEEEEECCCCCCCCEEEHHHHHHCCCCCEEEECCC
ENWQLTAGFRARHGRVLLFDPTNPDSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLE
CCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHH
RRNHWEKTSHALLVGAILHVLYAEPDKTLAGVASFLSDPRRTIEATLDAMMKTAHLGEAG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCC
PHPVIASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAEVTRRCDWRIADLVAGEIPT
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHCCCCC
TLYLVVPPSDINRTKPLVRLILNQVGRRLTEDLQTKPGRHRLLLMLDEFPALGRLDFFES
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH
ALAFMAGYGLKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTA
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCHH
TEMKAMKNYAGHRLSPWLGHLMVSRSETARQLLTPGEIMQLPPSDEIVMVAGTPPIRAKK
HHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHCCCCCEEECCCCCCEEEEECCCCCCHHH
ARYFEDVRFKERVLAPPELVRSDKPQPDDWSALPAPQRPPFDKATNTSGDPDEDPTGSER
HHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RHQPELSHANPIEKRKPIENEFDPPDEDGEDDATRSRRLTQVMGLNVARQVSMDPGDGMD
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHEECCCCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1665997; 8021214; 11976307 [H]