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The map label for this gene is trbB [H]

Identifier: 154244650

GI number: 154244650

Start: 788472

End: 789452

Strand: Reverse

Name: trbB [H]

Synonym: Xaut_0699

Alternate gene names: 154244650

Gene position: 789452-788472 (Counterclockwise)

Preceding gene: 154244651

Following gene: 154244649

Centisome position: 14.87

GC content: 68.81

Gene sequence:

>981_bases
ATGGCGGCTTCACATAACAATCCAGAAGGACGCGCGCGCAGTTCGCGCATGCTGCGCACGGCGCTCGGAGCCGCCATCGC
CCGCTTTCTGGACGACCCCGCGGTCGTCGAGGTCATGCTCAATCCCGATGGCCGCATCTGGGTGGACCGGCTGTCCGAGG
GCCTAGCCGATACGGGGGAGAGTCTGCCCGCAGCCGATGGTGAACGCATCGTGCGGCTCGTCGCCCATCATGTCGGCGCC
GAAGTGCATGCCGGGGCGCCGCGGGTTTCGGCCGAGCTGCCGGAGACCGGCGAACGCTTCGAAGGCCTGCTGCCGCCTGT
CGTCGCCGCACCCGCCTTCGCCATCCGCAAGCCCGCGGTGGCGGTGTTCACCCTCGATGACTATGTCGCCGCAGGCATCA
TGACGGCCGAGCAGGGCGCGACATTGCGCGAGGCGGTGGCGACGCGCGCCAATATTCTCGTCGCGGGCGGCACCTCGACC
GGCAAGACGACCCTGACCAACGCCCTTCTTGCCGAGGTGTCCAACAGCTCGGACCGCGTCGTCATCATCGAGGATACGCG
CGAGCTGCAATGCGCCGCGCCCAACCTCGTCGCCATGCGCACGAAAGACGGGGTGGCGACTCTCTCCGACCTCGTCCGTT
CCTCTCTGCGGCTTCGCCCGGATCGCATCCCCGTCGGCGAGGTGCGCGGCGCCGAAGCGCTCGACCTGCTCAAGGCCTGG
GGGACGGGACATCCGGGCGGCATCGGCACGATCCATGCCGGCTCCGGCATCGGCGCGCTGCGCCGCCTCGAACAACTTAT
CCAGGAAGCCGTCATCACCGTGCCGCGCGCCCTGATCGCCGAGACGATCGACCTGGTCGCGGTCCTCGCCGGACGCGGGT
CCGCGCGAAGGCTTGTCGAACTCGCGCGCGTCGAAGGGCTCAGCCCTGACGGCGACTACCGCATCACCCCCGCAACCAGT
TCAGAAGGGAAGTCCGAATGA

Upstream 100 bases:

>100_bases
CTACTCCGAAAGACAGTTGTTGAATCCACCAGAATTCGGGTTCTTTTAATCGTCCCCGTCGGGGCAGAACCGAATTGTTC
CCGGCCAGAACGGGGACAAG

Downstream 100 bases:

>100_bases
TCCGTCACGCCTTGCGCATGCGCCGTCACGTCGCGACAGCCGCGGCCGTCACCTATGTCAGCCTGTTCATGGCCCCGGCC
GCTCATGCGTCCGGGTCATC

Product: P-type conjugative transfer ATPase TrbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MAASHNNPEGRARSSRMLRTALGAAIARFLDDPAVVEVMLNPDGRIWVDRLSEGLADTGESLPAADGERIVRLVAHHVGA
EVHAGAPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAVAVFTLDDYVAAGIMTAEQGATLREAVATRANILVAGGTST
GKTTLTNALLAEVSNSSDRVVIIEDTRELQCAAPNLVAMRTKDGVATLSDLVRSSLRLRPDRIPVGEVRGAEALDLLKAW
GTGHPGGIGTIHAGSGIGALRRLEQLIQEAVITVPRALIAETIDLVAVLAGRGSARRLVELARVEGLSPDGDYRITPATS
SEGKSE

Sequences:

>Translated_326_residues
MAASHNNPEGRARSSRMLRTALGAAIARFLDDPAVVEVMLNPDGRIWVDRLSEGLADTGESLPAADGERIVRLVAHHVGA
EVHAGAPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAVAVFTLDDYVAAGIMTAEQGATLREAVATRANILVAGGTST
GKTTLTNALLAEVSNSSDRVVIIEDTRELQCAAPNLVAMRTKDGVATLSDLVRSSLRLRPDRIPVGEVRGAEALDLLKAW
GTGHPGGIGTIHAGSGIGALRRLEQLIQEAVITVPRALIAETIDLVAVLAGRGSARRLVELARVEGLSPDGDYRITPATS
SEGKSE
>Mature_325_residues
AASHNNPEGRARSSRMLRTALGAAIARFLDDPAVVEVMLNPDGRIWVDRLSEGLADTGESLPAADGERIVRLVAHHVGAE
VHAGAPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAVAVFTLDDYVAAGIMTAEQGATLREAVATRANILVAGGTSTG
KTTLTNALLAEVSNSSDRVVIIEDTRELQCAAPNLVAMRTKDGVATLSDLVRSSLRLRPDRIPVGEVRGAEALDLLKAWG
TGHPGGIGTIHAGSGIGALRRLEQLIQEAVITVPRALIAETIDLVAVLAGRGSARRLVELARVEGLSPDGDYRITPATSS
EGKSE

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 34119; Mature: 33988

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASHNNPEGRARSSRMLRTALGAAIARFLDDPAVVEVMLNPDGRIWVDRLSEGLADTGE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHHHHHCCC
SLPAADGERIVRLVAHHVGAEVHAGAPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAV
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHCCHHHHCCCCE
AVFTLDDYVAAGIMTAEQGATLREAVATRANILVAGGTSTGKTTLTNALLAEVSNSSDRV
EEEEEHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCEE
VIIEDTRELQCAAPNLVAMRTKDGVATLSDLVRSSLRLRPDRIPVGEVRGAEALDLLKAW
EEEECCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
GTGHPGGIGTIHAGSGIGALRRLEQLIQEAVITVPRALIAETIDLVAVLAGRGSARRLVE
CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LARVEGLSPDGDYRITPATSSEGKSE
HHHHCCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
AASHNNPEGRARSSRMLRTALGAAIARFLDDPAVVEVMLNPDGRIWVDRLSEGLADTGE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHHHHHCCC
SLPAADGERIVRLVAHHVGAEVHAGAPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAV
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHCCHHHHCCCCE
AVFTLDDYVAAGIMTAEQGATLREAVATRANILVAGGTSTGKTTLTNALLAEVSNSSDRV
EEEEEHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCEE
VIIEDTRELQCAAPNLVAMRTKDGVATLSDLVRSSLRLRPDRIPVGEVRGAEALDLLKAW
EEEECCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
GTGHPGGIGTIHAGSGIGALRRLEQLIQEAVITVPRALIAETIDLVAVLAGRGSARRLVE
CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LARVEGLSPDGDYRITPATSSEGKSE
HHHHCCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]