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The map label for this gene is ybeQ [H]

Identifier: 154244608

GI number: 154244608

Start: 738404

End: 739723

Strand: Reverse

Name: ybeQ [H]

Synonym: Xaut_0657

Alternate gene names: 154244608

Gene position: 739723-738404 (Counterclockwise)

Preceding gene: 154244609

Following gene: 154244607

Centisome position: 13.93

GC content: 74.47

Gene sequence:

>1320_bases
ATGAGCTGGCTTGACCGACTGAAGGGCAAGGGGGGTCCGGGCGAGACGCCAGGTGCCGAAGATCCACCGCGCGTGCGCCC
CTTCCCGCAACGCCCCCAGCGCCCCACCGAGGAGCGCCCCGAGACGACGGAGGCGGACGACCTCGACGCCCTCCTGAGCG
ACATCGCCTCCGGCCTGTCGGGTAGCCGCGCCGCGAGCCCCGCGTCCGAGCCGGAGAGCCCGATCCACCGCCGGCCCCGG
CTCGACGAGCGCCCGCGCCTTGAGCAGGAGGTCGCGCCCGTGCCGCCGCAGGCACCGGCCCGCGAGACCCCGACCCGGGA
AATCCCACACCGCCAAGTCCCCGACTGGGAGGCCCCCGCCGCCGCCCCGCCGGCCGCGCGGGAGCCCGAGGCGCCGGTGC
GGACGGAACCCGCCTTCGACGAGGTGGAGTTCGAGCGCCTGCTGGTGGCGGAGACCTTCGCCAACGAGCCGCCGTTTGAT
TCGCCGCCCCTGAAGGCGGCGGAAGCCGAGCCCCTGCCGGTCGAGCCTTTGCCGGAACCCGAGCCGGAACCGGAGCCCGA
GCCCGAGGACACCCGTACGCCGGAGGCGCAAATGGCGGCCGCCCTCGCCGCCGCCTCCGCCGGGGAATACGAAACAGCCC
TGTCCATCTGGGAGCCCCTGGCCCGCACCGGCAACGCCCGGGCGCAGAACAATATCGGCGCCTGCTTCATCGACGGGCTG
GGCGTGGACAAGGATCTGGACCTTGCCCGCCGCTGGCTGGAACTGTCCGCCGAGGGCGGCGACCCGGTGGGCCGGCGCAA
CCTGGCCACCCTCTACTTCAAAGGCGCCGGCGTGGCTCAGGACTATGCCAAGGCCGCCGCGCTTTACCTCGCCGCCGCCG
AGGACGGCGACGGCCCGGCCCAGGACATGCTGAGCTGGATGCTGCTGGAAGGCGAGGTCATCCCCTCCGATCCGGTGGAG
GCGCGGCGCTGGGCGCTGGCCGCCGCGGACCAGGGCATCGCCTCGTCCATGACGCGGCTCGGCATGATCGCCCACAATGC
CCTCGGCATGGAGCGCGATGCGGTGGAAGCCGCCCGCTGGTGGCGCAAAGGCGCCGAGGCCGGCGATGCCGACGGGCAGG
CCATGCTTGGCGCGGCCTGCCACATGGGCGCGGGCGTGGCGCGCGACAGCGTCGCCGCCTTCGCCTGGCTGCTGCGGGCC
CGCGCCGGCAAGAGCGCGCTGGCGGAGCGCTTCTTCGATGCCGTGCGCACCAGCCTGACGCCGGAGGAGGAAGCCGCCGC
CCAGCGCCGCGCCGCCATTCCACTGGGGGAGCTGCCCTGA

Upstream 100 bases:

>100_bases
GTCATCGGACGGATTGACGATAACGCTCTTGTGCTCGATTTGAGATGCCTTGAAGACGAAGCGGCGTTTCTCGCGTCCGT
GACCGCTTTGGAGGGGGCTC

Downstream 100 bases:

>100_bases
CGTGATCATCGGCACGGCCGGACATATCGACCATGGCAAGACCACGCTGGTCCGTGCGCTCACCGGTGTCGATACTGACC
GGCTGAAGGAGGAGAAGGCG

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MSWLDRLKGKGGPGETPGAEDPPRVRPFPQRPQRPTEERPETTEADDLDALLSDIASGLSGSRAASPASEPESPIHRRPR
LDERPRLEQEVAPVPPQAPARETPTREIPHRQVPDWEAPAAAPPAAREPEAPVRTEPAFDEVEFERLLVAETFANEPPFD
SPPLKAAEAEPLPVEPLPEPEPEPEPEPEDTRTPEAQMAAALAAASAGEYETALSIWEPLARTGNARAQNNIGACFIDGL
GVDKDLDLARRWLELSAEGGDPVGRRNLATLYFKGAGVAQDYAKAAALYLAAAEDGDGPAQDMLSWMLLEGEVIPSDPVE
ARRWALAAADQGIASSMTRLGMIAHNALGMERDAVEAARWWRKGAEAGDADGQAMLGAACHMGAGVARDSVAAFAWLLRA
RAGKSALAERFFDAVRTSLTPEEEAAAQRRAAIPLGELP

Sequences:

>Translated_439_residues
MSWLDRLKGKGGPGETPGAEDPPRVRPFPQRPQRPTEERPETTEADDLDALLSDIASGLSGSRAASPASEPESPIHRRPR
LDERPRLEQEVAPVPPQAPARETPTREIPHRQVPDWEAPAAAPPAAREPEAPVRTEPAFDEVEFERLLVAETFANEPPFD
SPPLKAAEAEPLPVEPLPEPEPEPEPEPEDTRTPEAQMAAALAAASAGEYETALSIWEPLARTGNARAQNNIGACFIDGL
GVDKDLDLARRWLELSAEGGDPVGRRNLATLYFKGAGVAQDYAKAAALYLAAAEDGDGPAQDMLSWMLLEGEVIPSDPVE
ARRWALAAADQGIASSMTRLGMIAHNALGMERDAVEAARWWRKGAEAGDADGQAMLGAACHMGAGVARDSVAAFAWLLRA
RAGKSALAERFFDAVRTSLTPEEEAAAQRRAAIPLGELP
>Mature_438_residues
SWLDRLKGKGGPGETPGAEDPPRVRPFPQRPQRPTEERPETTEADDLDALLSDIASGLSGSRAASPASEPESPIHRRPRL
DERPRLEQEVAPVPPQAPARETPTREIPHRQVPDWEAPAAAPPAAREPEAPVRTEPAFDEVEFERLLVAETFANEPPFDS
PPLKAAEAEPLPVEPLPEPEPEPEPEPEDTRTPEAQMAAALAAASAGEYETALSIWEPLARTGNARAQNNIGACFIDGLG
VDKDLDLARRWLELSAEGGDPVGRRNLATLYFKGAGVAQDYAKAAALYLAAAEDGDGPAQDMLSWMLLEGEVIPSDPVEA
RRWALAAADQGIASSMTRLGMIAHNALGMERDAVEAARWWRKGAEAGDADGQAMLGAACHMGAGVARDSVAAFAWLLRAR
AGKSALAERFFDAVRTSLTPEEEAAAQRRAAIPLGELP

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=152, Percent_Identity=30.9210526315789, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI87081769, Length=177, Percent_Identity=35.5932203389831, Blast_Score=103, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21355295, Length=186, Percent_Identity=26.8817204301075, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 47045; Mature: 46914

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLDRLKGKGGPGETPGAEDPPRVRPFPQRPQRPTEERPETTEADDLDALLSDIASGLS
CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
GSRAASPASEPESPIHRRPRLDERPRLEQEVAPVPPQAPARETPTREIPHRQVPDWEAPA
CCCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAPPAAREPEAPVRTEPAFDEVEFERLLVAETFANEPPFDSPPLKAAEAEPLPVEPLPEP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPEPEPEPEDTRTPEAQMAAALAAASAGEYETALSIWEPLARTGNARAQNNIGACFIDGL
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
GVDKDLDLARRWLELSAEGGDPVGRRNLATLYFKGAGVAQDYAKAAALYLAAAEDGDGPA
CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHEEECCCCCCHH
QDMLSWMLLEGEVIPSDPVEARRWALAAADQGIASSMTRLGMIAHNALGMERDAVEAARW
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WRKGAEAGDADGQAMLGAACHMGAGVARDSVAAFAWLLRARAGKSALAERFFDAVRTSLT
HHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
PEEEAAAQRRAAIPLGELP
CHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SWLDRLKGKGGPGETPGAEDPPRVRPFPQRPQRPTEERPETTEADDLDALLSDIASGLS
CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
GSRAASPASEPESPIHRRPRLDERPRLEQEVAPVPPQAPARETPTREIPHRQVPDWEAPA
CCCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAPPAAREPEAPVRTEPAFDEVEFERLLVAETFANEPPFDSPPLKAAEAEPLPVEPLPEP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPEPEPEPEDTRTPEAQMAAALAAASAGEYETALSIWEPLARTGNARAQNNIGACFIDGL
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
GVDKDLDLARRWLELSAEGGDPVGRRNLATLYFKGAGVAQDYAKAAALYLAAAEDGDGPA
CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHEEECCCCCCHH
QDMLSWMLLEGEVIPSDPVEARRWALAAADQGIASSMTRLGMIAHNALGMERDAVEAARW
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WRKGAEAGDADGQAMLGAACHMGAGVARDSVAAFAWLLRARAGKSALAERFFDAVRTSLT
HHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
PEEEAAAQRRAAIPLGELP
CHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]