Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is braE [H]
Identifier: 154244595
GI number: 154244595
Start: 722967
End: 724010
Strand: Reverse
Name: braE [H]
Synonym: Xaut_0643
Alternate gene names: 154244595
Gene position: 724010-722967 (Counterclockwise)
Preceding gene: 154244596
Following gene: 154244594
Centisome position: 13.64
GC content: 68.01
Gene sequence:
>1044_bases ATGACGCGCTTCATCGCCCCCCTCTTCCTCGTGGTCTTCGCCCTGGTCCCGCTCGGGCTCAAGGACCCCTATCTGCTCAA TGCCCTCATCATCACGGGCATCCTCACCATCTGCGCCATGAGCCTGAACCTGCTGCTCGGCTTCACCGGGCAGCTCAGCC TCGGGCACGTGGCCTTCTTCGGCATCGGCGCCTATGTGAGCGCGCTCACCGCTCTGGGCTTCGACGTGAGCCTGCCGTTC GGTCTGCGGGTGACCCACGAGGGCGGATCGCCGCTGATGGGCTTCGTGCTGGCCGTCGGCCTTACGGGACTGTGCGGCTA TCTCATCGGCCGGCTGTCGTTCCGGGTGCGGGGCGCCTATTTCGTCATCGTCACCATCTCGTTCGCCGAGGTGGTGCGGC TGGTGGCGCTGAACTGGGTGGAGCTGACGCAGGGCCCGCTCGCCCTCACCGCCATCCCCAACATGGTGCTGCCGGTGCCC GGCCTCGGCGACGTGGCGCTGCGCTCCAAGATGCAGAACTACTACCTGGTGCTGGCGGTGGCGGCGGTGAGCTATCTCAT CATCGCCCGGCTGGTGGCCTCGCGCTTCGGCAGGGCCATGCGCGGGCTGAAGGAGAACGAATCCCTCGCCCTCTCCCTCG GCATCAACGCCACCCGCACCCTCACCGTGGCGGCCACCATCTCCGCCGCCATGGCCGGGGCGGCGGGCAGCCTCTATGCC CATTACATCCGCATCATCGATCCGGACGTGTTCCTGTTCTCCTACACCGTCACCATGGTCATCATGGTGGTGTCGGGCGG CAAGGGCACGCTGGCCGGCCCGCTGGTGGGCGGCATCCTGTTCGGCCTGCTGCCGGTGGCGCTGCGGCCGGTGATGGCGC CGGAAGCGCAATGGATCGTCTACGGCGCCATCCTCATCGCCATCCTGTTCCTGATGCCACGGGGCATCGTGCCGGCTCTG GAGAGCCTCGCCCTCCGCCGCAGGCCGGCGGCCGCCGAGGCCAAGATCCCGGCAAAGAACGCCGAAGCGGGAGCCAACCC ATGA
Upstream 100 bases:
>100_bases ACATCTCCTCGGGCTATCGCGACGCCATGGGCTTCCTCATCATCATCGCGGTGCTGCTGGTGAAGCCCACCGGCCTGTTC GCCCGCGCGGAGCGGATCGG
Downstream 100 bases:
>100_bases GCACGCGTGAGAGCACGCCCATGAGCCATCCTGCGGGCACGGCCATCCTCAATGTGGAGCATGTGGGCATGCGGTTCGGT GGCCTCACCGCCATCGCCGA
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTRFIAPLFLVVFALVPLGLKDPYLLNALIITGILTICAMSLNLLLGFTGQLSLGHVAFFGIGAYVSALTALGFDVSLPF GLRVTHEGGSPLMGFVLAVGLTGLCGYLIGRLSFRVRGAYFVIVTISFAEVVRLVALNWVELTQGPLALTAIPNMVLPVP GLGDVALRSKMQNYYLVLAVAAVSYLIIARLVASRFGRAMRGLKENESLALSLGINATRTLTVAATISAAMAGAAGSLYA HYIRIIDPDVFLFSYTVTMVIMVVSGGKGTLAGPLVGGILFGLLPVALRPVMAPEAQWIVYGAILIAILFLMPRGIVPAL ESLALRRRPAAAEAKIPAKNAEAGANP
Sequences:
>Translated_347_residues MTRFIAPLFLVVFALVPLGLKDPYLLNALIITGILTICAMSLNLLLGFTGQLSLGHVAFFGIGAYVSALTALGFDVSLPF GLRVTHEGGSPLMGFVLAVGLTGLCGYLIGRLSFRVRGAYFVIVTISFAEVVRLVALNWVELTQGPLALTAIPNMVLPVP GLGDVALRSKMQNYYLVLAVAAVSYLIIARLVASRFGRAMRGLKENESLALSLGINATRTLTVAATISAAMAGAAGSLYA HYIRIIDPDVFLFSYTVTMVIMVVSGGKGTLAGPLVGGILFGLLPVALRPVMAPEAQWIVYGAILIAILFLMPRGIVPAL ESLALRRRPAAAEAKIPAKNAEAGANP >Mature_346_residues TRFIAPLFLVVFALVPLGLKDPYLLNALIITGILTICAMSLNLLLGFTGQLSLGHVAFFGIGAYVSALTALGFDVSLPFG LRVTHEGGSPLMGFVLAVGLTGLCGYLIGRLSFRVRGAYFVIVTISFAEVVRLVALNWVELTQGPLALTAIPNMVLPVPG LGDVALRSKMQNYYLVLAVAAVSYLIIARLVASRFGRAMRGLKENESLALSLGINATRTLTVAATISAAMAGAAGSLYAH YIRIIDPDVFLFSYTVTMVIMVVSGGKGTLAGPLVGGILFGLLPVALRPVMAPEAQWIVYGAILIAILFLMPRGIVPALE SLALRRRPAAAEAKIPAKNAEAGANP
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=328, Percent_Identity=29.5731707317073, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1789866, Length=311, Percent_Identity=28.6173633440514, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 36524; Mature: 36393
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFIAPLFLVVFALVPLGLKDPYLLNALIITGILTICAMSLNLLLGFTGQLSLGHVAFF CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH GIGAYVSALTALGFDVSLPFGLRVTHEGGSPLMGFVLAVGLTGLCGYLIGRLSFRVRGAY HHHHHHHHHHHHCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCEE FVIVTISFAEVVRLVALNWVELTQGPLALTAIPNMVLPVPGLGDVALRSKMQNYYLVLAV EEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHH AAVSYLIIARLVASRFGRAMRGLKENESLALSLGINATRTLTVAATISAAMAGAAGSLYA HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCHHHHH HYIRIIDPDVFLFSYTVTMVIMVVSGGKGTLAGPLVGGILFGLLPVALRPVMAPEAQWIV HHHHHCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH YGAILIAILFLMPRGIVPALESLALRRRPAAAEAKIPAKNAEAGANP HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRFIAPLFLVVFALVPLGLKDPYLLNALIITGILTICAMSLNLLLGFTGQLSLGHVAFF CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH GIGAYVSALTALGFDVSLPFGLRVTHEGGSPLMGFVLAVGLTGLCGYLIGRLSFRVRGAY HHHHHHHHHHHHCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCEE FVIVTISFAEVVRLVALNWVELTQGPLALTAIPNMVLPVPGLGDVALRSKMQNYYLVLAV EEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHH AAVSYLIIARLVASRFGRAMRGLKENESLALSLGINATRTLTVAATISAAMAGAAGSLYA HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCHHHHH HYIRIIDPDVFLFSYTVTMVIMVVSGGKGTLAGPLVGGILFGLLPVALRPVMAPEAQWIV HHHHHCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH YGAILIAILFLMPRGIVPALESLALRRRPAAAEAKIPAKNAEAGANP HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]