Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154244579
Identifier: 154244579
GI number: 154244579
Start: 703505
End: 705400
Strand: Reverse
Name: 154244579
Synonym: Xaut_0627
Alternate gene names: NA
Gene position: 705400-703505 (Counterclockwise)
Preceding gene: 154244581
Following gene: 154244577
Centisome position: 13.29
GC content: 49.84
Gene sequence:
>1896_bases ATGTCCAACAGCTTTGAACCAACAGCAAGCATCAAGCTCGTCATCTGGGATCTTGACGAGACCTTTTGGGAGGGAACCCT CTCCGAAGGCCAAGTGCGCCTCATTGACAATAATATTAACATTGTCAAGACATTAACGGATCGAGGGATCGTTTCTTCAA TTTCTTCAAAGAACGATTTCGACAATGTTCGCGAACTTCTCACTCACGAAGGCCTTTGGGATTATTTTGTTTTTCCTCAG ATTTCGTGGGACCCGAAGGGAGGATCTGTCGCTTCTATCATCGAGCAGGCAAACCTGCGACCTGACAACGTTCTTTTTAT TGATGATAACTCTTTGAATATTGAAGAAATTCGATTTCGGTTTCCGACCATCATGGCAGGGTACCCACAGGACGTACTTC CGCACCTCCTCGATGTGGAGGCCACAAAGGGCAAGGACGATCGCTCCCATTCCCGACTAAAGCAGTACAAGCAGCTTGAG AACAAGGTTACAGACCAGAAACAGACTGCATTGAGCAACGATGAATTTCTTCGTCAATGCGACATTAAGTTACGATTTGA ATACGATGTCGAAAGTCATCTACCGCTCGTCATTGAACTAATAAACAGATCAAATCAGCTCAACTACACAAAGATCCGAC TTGAGACCGATGAGGCCGTCGCGAACTTCAAGGAACAACTGAAGCGTCACGATGTGTTCGCGGCGGGCATCTTTGCCAAG GACCGGTATGGCGACCATGGTCTTATCGGATTTTATATGCAGATGCGAAACGAGCGCATCAACAAGCTGACTCATTACGT CTGGTCATGCCGAATGATGAATTCGGGCCTGGAGCAGTACGTCTACGAGCGCCTCGGCAAACCGGAAATCAAGATTGCTC AGCCGGTTTCAAATCCAATTGTCACCTTCCCCAAGGTGGACTGGATTACGGAGGTAACTCAAGACGACCAAGTCGAGGCG ACCGGACAGGCGCCGCAGCTGCTTCTCATTGGCAGCTGTGACCTGACCGCGGTGGCGAGCTATTGCAGCCCAAACCGCAT CGAATTTGTCAACGGCGTCAAAAACGAGGTCATGACCCGTTATGACGACTTCGGGTTTATCCTTGGCGATGCGGCCAAGG TCACCAGATCCCGTCAGATCGACAAAATTCCAGCTTGGACAACGTCTGACTTCACGAACTTCGCAGACGCTTTGCCGTCT AGCAAAATCCTCGTCGTATCCCTTTCCGCCGCGATGAAGGGCTCTTATCTGGTAACAAAAGACGGCGTCGTTGTTCGCAT ACACCCCGAGGGACTTGGAAATTTCATAGACACCAATCCTTGGGCTGAGTTTTTGAAGGGCGTCAGCTATTATGATATCA ACGACGGTATACGCACTTTACTTTTGAACAACAGTCTTCATTTGTTGAACAATAAGGCTACTTCTGCAAAATATAAATTC CTACTCGGGGCAAACACACGTGATGTCGGGGGTGTCCTGTCGGATGAGAACCGCGACCTGATGCAGCACTACAACAAGCT GTGCAAGGCGTTTTGCGCGTCAGTTTCAGGATGGCACTTCGTTTCCATTGATGATGTCGTTTCCCGGGAGAAATTGTTGG ACGATCGGCATTATACCCGCACCGGATACATGGACATCGCGACCTATATCAACGAGCGTGTTCGGGAGACTGCATCAGAT GATGCACTATCTCCCACGACGGGTACAGAATATGCGAACCTGAGCCTGAGCGTTGAGGACGTCGTCCGGGCAGGCCGTCC CTTGAGTGCACTGAGCTTGTTCGGCTCAAAGAGAGGCGGTGTTGCCCATATCAAGAGGGCGATCAAGCTCACGCCAGTGT TCAAGGTAGTCCGCAAATTTGTTGTCAGGGAAAGCCAACCTCAGATTGCCGGGTGA
Upstream 100 bases:
>100_bases GCCACATCTGATACGAAATTCAACAGCGCTACCCGGGCACTATAGGCGCCGCTCGTCCGCGCCTTGGAATTGTGCGCTTA AAAACTTGTTTGGGGGGATG
Downstream 100 bases:
>100_bases AGCCGTCGCCATCCCGATTAATCAGCGTGGCCTGGCTTGTGGCAATTCAAGCTCCCGAACAGGGCGGCCTCGCCACGCGC TGCGACCGCCGCCCAGAAAA
Product: FkbH like protein
Products: NA
Alternate protein names: FkbH Domain-Containing Protein; Amino Acid Adenylation Domain Protein; FkbH-Like Protein; Phosphatase IIIC; FkbH Domain Protein; Methoxymalonate Biosynthesis Protein; Modular Polyketide Synthase; HAD Family Phosphatase; FkbH-Protein; Polyketide Synthase Protein; Modular Polyketide Synthase Type I PKS; Involved In Methoxymalonyl-ACP Biosynthesis-Like; FkbH Domain; HAD-Superfamily Phosphatase; HAD-Superfamily Phosphatase Subfamily IIIC; Peptide Synthetase; Had-Superfamily Phosphatase Subfamily IIIc; Methoxymalonyl-ACP Biosynthesis Protein; HAD Family Phosphatase FbkH; Methoxymalonate Biosynthesis Protein HbmH
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MSNSFEPTASIKLVIWDLDETFWEGTLSEGQVRLIDNNINIVKTLTDRGIVSSISSKNDFDNVRELLTHEGLWDYFVFPQ ISWDPKGGSVASIIEQANLRPDNVLFIDDNSLNIEEIRFRFPTIMAGYPQDVLPHLLDVEATKGKDDRSHSRLKQYKQLE NKVTDQKQTALSNDEFLRQCDIKLRFEYDVESHLPLVIELINRSNQLNYTKIRLETDEAVANFKEQLKRHDVFAAGIFAK DRYGDHGLIGFYMQMRNERINKLTHYVWSCRMMNSGLEQYVYERLGKPEIKIAQPVSNPIVTFPKVDWITEVTQDDQVEA TGQAPQLLLIGSCDLTAVASYCSPNRIEFVNGVKNEVMTRYDDFGFILGDAAKVTRSRQIDKIPAWTTSDFTNFADALPS SKILVVSLSAAMKGSYLVTKDGVVVRIHPEGLGNFIDTNPWAEFLKGVSYYDINDGIRTLLLNNSLHLLNNKATSAKYKF LLGANTRDVGGVLSDENRDLMQHYNKLCKAFCASVSGWHFVSIDDVVSREKLLDDRHYTRTGYMDIATYINERVRETASD DALSPTTGTEYANLSLSVEDVVRAGRPLSALSLFGSKRGGVAHIKRAIKLTPVFKVVRKFVVRESQPQIAG
Sequences:
>Translated_631_residues MSNSFEPTASIKLVIWDLDETFWEGTLSEGQVRLIDNNINIVKTLTDRGIVSSISSKNDFDNVRELLTHEGLWDYFVFPQ ISWDPKGGSVASIIEQANLRPDNVLFIDDNSLNIEEIRFRFPTIMAGYPQDVLPHLLDVEATKGKDDRSHSRLKQYKQLE NKVTDQKQTALSNDEFLRQCDIKLRFEYDVESHLPLVIELINRSNQLNYTKIRLETDEAVANFKEQLKRHDVFAAGIFAK DRYGDHGLIGFYMQMRNERINKLTHYVWSCRMMNSGLEQYVYERLGKPEIKIAQPVSNPIVTFPKVDWITEVTQDDQVEA TGQAPQLLLIGSCDLTAVASYCSPNRIEFVNGVKNEVMTRYDDFGFILGDAAKVTRSRQIDKIPAWTTSDFTNFADALPS SKILVVSLSAAMKGSYLVTKDGVVVRIHPEGLGNFIDTNPWAEFLKGVSYYDINDGIRTLLLNNSLHLLNNKATSAKYKF LLGANTRDVGGVLSDENRDLMQHYNKLCKAFCASVSGWHFVSIDDVVSREKLLDDRHYTRTGYMDIATYINERVRETASD DALSPTTGTEYANLSLSVEDVVRAGRPLSALSLFGSKRGGVAHIKRAIKLTPVFKVVRKFVVRESQPQIAG >Mature_630_residues SNSFEPTASIKLVIWDLDETFWEGTLSEGQVRLIDNNINIVKTLTDRGIVSSISSKNDFDNVRELLTHEGLWDYFVFPQI SWDPKGGSVASIIEQANLRPDNVLFIDDNSLNIEEIRFRFPTIMAGYPQDVLPHLLDVEATKGKDDRSHSRLKQYKQLEN KVTDQKQTALSNDEFLRQCDIKLRFEYDVESHLPLVIELINRSNQLNYTKIRLETDEAVANFKEQLKRHDVFAAGIFAKD RYGDHGLIGFYMQMRNERINKLTHYVWSCRMMNSGLEQYVYERLGKPEIKIAQPVSNPIVTFPKVDWITEVTQDDQVEAT GQAPQLLLIGSCDLTAVASYCSPNRIEFVNGVKNEVMTRYDDFGFILGDAAKVTRSRQIDKIPAWTTSDFTNFADALPSS KILVVSLSAAMKGSYLVTKDGVVVRIHPEGLGNFIDTNPWAEFLKGVSYYDINDGIRTLLLNNSLHLLNNKATSAKYKFL LGANTRDVGGVLSDENRDLMQHYNKLCKAFCASVSGWHFVSIDDVVSREKLLDDRHYTRTGYMDIATYINERVRETASDD ALSPTTGTEYANLSLSVEDVVRAGRPLSALSLFGSKRGGVAHIKRAIKLTPVFKVVRKFVVRESQPQIAG
Specific function: Unknown
COG id: COG3882
COG function: function code Q; Predicted enzyme involved in methoxymalonyl-ACP biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71370; Mature: 71239
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSFEPTASIKLVIWDLDETFWEGTLSEGQVRLIDNNINIVKTLTDRGIVSSISSKNDF CCCCCCCCCEEEEEEECCCHHHHCCCCCCCEEEEEECCCEEEEEECCCHHHHHHCCCCCH DNVRELLTHEGLWDYFVFPQISWDPKGGSVASIIEQANLRPDNVLFIDDNSLNIEEIRFR HHHHHHHHHCCCCCEEECCEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHH FPTIMAGYPQDVLPHLLDVEATKGKDDRSHSRLKQYKQLENKVTDQKQTALSNDEFLRQC CCHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC DIKLRFEYDVESHLPLVIELINRSNQLNYTKIRLETDEAVANFKEQLKRHDVFAAGIFAK CEEEEEEECCCCCCHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEEE DRYGDHGLIGFYMQMRNERINKLTHYVWSCRMMNSGLEQYVYERLGKPEIKIAQPVSNPI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCE VTFPKVDWITEVTQDDQVEATGQAPQLLLIGSCDLTAVASYCSPNRIEFVNGVKNEVMTR EECCCCHHHHHCCCCCCEEECCCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHH YDDFGFILGDAAKVTRSRQIDKIPAWTTSDFTNFADALPSSKILVVSLSAAMKGSYLVTK HCCCCEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECHHHCCCEEEEC DGVVVRIHPEGLGNFIDTNPWAEFLKGVSYYDINDGIRTLLLNNSLHLLNNKATSAKYKF CCEEEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCCEEEHCCCCCCEECCCCCCCEEEE LLGANTRDVGGVLSDENRDLMQHYNKLCKAFCASVSGWHFVSIDDVVSREKLLDDRHYTR EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCC TGYMDIATYINERVRETASDDALSPTTGTEYANLSLSVEDVVRAGRPLSALSLFGSKRGG CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCHHHHHHHCCCCCC VAHIKRAIKLTPVFKVVRKFVVRESQPQIAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SNSFEPTASIKLVIWDLDETFWEGTLSEGQVRLIDNNINIVKTLTDRGIVSSISSKNDF CCCCCCCCEEEEEEECCCHHHHCCCCCCCEEEEEECCCEEEEEECCCHHHHHHCCCCCH DNVRELLTHEGLWDYFVFPQISWDPKGGSVASIIEQANLRPDNVLFIDDNSLNIEEIRFR HHHHHHHHHCCCCCEEECCEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHH FPTIMAGYPQDVLPHLLDVEATKGKDDRSHSRLKQYKQLENKVTDQKQTALSNDEFLRQC CCHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC DIKLRFEYDVESHLPLVIELINRSNQLNYTKIRLETDEAVANFKEQLKRHDVFAAGIFAK CEEEEEEECCCCCCHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEEE DRYGDHGLIGFYMQMRNERINKLTHYVWSCRMMNSGLEQYVYERLGKPEIKIAQPVSNPI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCE VTFPKVDWITEVTQDDQVEATGQAPQLLLIGSCDLTAVASYCSPNRIEFVNGVKNEVMTR EECCCCHHHHHCCCCCCEEECCCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHH YDDFGFILGDAAKVTRSRQIDKIPAWTTSDFTNFADALPSSKILVVSLSAAMKGSYLVTK HCCCCEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECHHHCCCEEEEC DGVVVRIHPEGLGNFIDTNPWAEFLKGVSYYDINDGIRTLLLNNSLHLLNNKATSAKYKF CCEEEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCCEEEHCCCCCCEECCCCCCCEEEE LLGANTRDVGGVLSDENRDLMQHYNKLCKAFCASVSGWHFVSIDDVVSREKLLDDRHYTR EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCC TGYMDIATYINERVRETASDDALSPTTGTEYANLSLSVEDVVRAGRPLSALSLFGSKRGG CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCHHHHHHHCCCCCC VAHIKRAIKLTPVFKVVRKFVVRESQPQIAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA