Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is yggT [C]
Identifier: 154244465
GI number: 154244465
Start: 563257
End: 563547
Strand: Reverse
Name: yggT [C]
Synonym: Xaut_0508
Alternate gene names: 154244465
Gene position: 563547-563257 (Counterclockwise)
Preceding gene: 154244469
Following gene: 154244464
Centisome position: 10.62
GC content: 61.17
Gene sequence:
>291_bases ATGCGCGCGCTGCTCGACGTCATCCTTCTCGTTCTTCAGCTTTATGTCTGGCTGCTCATCGCCTCGGCGGTGCTGTCCTG GCTCGTGGCGTTCAACGTGGTGAACGCCCACAATTCGTTCGTCCGCAGCGTGGGCGAGTTCCTCTACCGCATCACCGAGC CGGTGCTCGCGCCCATCCGCTCCGTGCTGCCCAACCTCGGCGGCCTCGACCTGTCGCCCATGGTGCTGATCCTGATCATC TTCTTCATCCAGCAGGTCATCGGCTACTACATCTACCCGAACGTCTTCTGA
Upstream 100 bases:
>100_bases GAAACCTGCATCGGACCTGCCACGAGCGGCCTGCGGCCTTGTTCAGAACCACTTCGGGGGGCTATTGCTGACGCGCAACT CCCCGGGGACCCTTCCTGCG
Downstream 100 bases:
>100_bases CCGGCGGGGCGGGCCTGTTGTCGTTCCTGAAGCTGCTGCCCGACGGGGTGGAGGTGACCGTGCGCGCCACCCCGCGAGGT GGGAGGGACGCTCTTGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MRALLDVILLVLQLYVWLLIASAVLSWLVAFNVVNAHNSFVRSVGEFLYRITEPVLAPIRSVLPNLGGLDLSPMVLILII FFIQQVIGYYIYPNVF
Sequences:
>Translated_96_residues MRALLDVILLVLQLYVWLLIASAVLSWLVAFNVVNAHNSFVRSVGEFLYRITEPVLAPIRSVLPNLGGLDLSPMVLILII FFIQQVIGYYIYPNVF >Mature_96_residues MRALLDVILLVLQLYVWLLIASAVLSWLVAFNVVNAHNSFVRSVGEFLYRITEPVLAPIRSVLPNLGGLDLSPMVLILII FFIQQVIGYYIYPNVF
Specific function: Unknown
COG id: COG0762
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yggT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003425 [H]
Pfam domain/function: PF02325 YGGT [H]
EC number: NA
Molecular weight: Translated: 10877; Mature: 10877
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALLDVILLVLQLYVWLLIASAVLSWLVAFNVVNAHNSFVRSVGEFLYRITEPVLAPIR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVLPNLGGLDLSPMVLILIIFFIQQVIGYYIYPNVF HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRALLDVILLVLQLYVWLLIASAVLSWLVAFNVVNAHNSFVRSVGEFLYRITEPVLAPIR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVLPNLGGLDLSPMVLILIIFFIQQVIGYYIYPNVF HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]