Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154244419

Identifier: 154244419

GI number: 154244419

Start: 504821

End: 505705

Strand: Direct

Name: 154244419

Synonym: Xaut_0462

Alternate gene names: NA

Gene position: 504821-505705 (Clockwise)

Preceding gene: 154244418

Following gene: 154244420

Centisome position: 9.51

GC content: 68.36

Gene sequence:

>885_bases
GTGAGCACGACTCAAGATTCCCACCATGGCAAGGTGGATGCCGCAACCGGGGTCTCGACCACCGGTCACGAATGGGATGG
CATCTCGGAGCTGAACAACCCGCTTCCGCGGTGGTGGCTGTGGGTGTGGTATGCCTGCATCGTCTGGGCCATCGGCTACT
GGATCCTGTATCCCGCCTGGCCGCTGGTCAGCTCGGCGACGCCGGGCCTTCTGGGCTGGCATTCGCGTTCGGCCGTCCAG
GTCCAGCTCACCGATCTCCAGGCGCTGCGTGCCGAGAGCGCGGCCAAGCTCGCCAACGCCTCGCTCGAGCAGATCGAGCA
GACGCCGGCGCTTTTGACCCTCGCCCGGGCCCAGGGACGCGTCGCCTTCGCCGACAATTGCGCGCCGTGCCACGGCGCCG
GCGGCGGCGGGGCCACCGGCTTCCCCAACCTCAATGATGACGACTGGCTGTGGGGCGGTTCGCTGGAGCAGATCCAGCAG
ACCATCCAGTACGGCATCCGCTCCGGCGATGCCGAGGCGCGCACCGGCTCCATGCCCGCCTTCGGCCGCGACGGCATCCT
GCAGAAGCCGGAAATCTCGGCGGTCGCGGACTATGTGCGCACCCTGTCCGGCATCGCCCAGCCCGGCGCGGATTTCGCCA
AGGGCAAGGAAGTGTTCGCCGCCAATTGCGCCGCCTGCCACGGCGACGACGGCAAGGGCAACCAGGAACTGGGTGCCCCC
AACCTGACGGATGGCATCTGGCTCTACGGCTCGGACAAGGCCACCATCGAGTACGGCATCGTCAATGGCCGCGGCAACGT
GATGCCGGCATGGCACGCCCGCCTCGAGCCGACCACCGTCAAGGCGCTGACCGTCTACGTGCACTCCCTCGGCGGCGGTC
GCTGA

Upstream 100 bases:

>100_bases
GGTTTCATGCTGGTGATCGCCTACGTCTTCTGGCCCTCGAAAACGAGGACGAAGGCATTCGACGACGCCGCCAACATTCC
GCTCAAAGAGGATTGATCCC

Downstream 100 bases:

>100_bases
CGGGAGAGCCCCGCGCGGCCCGGCTTGCCCCGCGCCGGCCGGGCGCGCAGACTGAATGAGAAGCGCGCCGGATCGAGGCA
GTTGCCCGGTCCGGCGCGTG

Product: cytochrome c oxidase, cbb3-type subunit III

Products: ferricytochrome c; H2O

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit III; Cytochrome C Class I; Cytochrome-C Oxidase FixP Chain; Cytochrome C Oxidase Subunit CcoP; Cb-Type Cytochrome C Oxidase Subunit III; Cytochrome C; Cytochrome-Cbb3 Oxidase Subunit III; Cytochrome C Oxidase Subunit; Cytochrome C Oxidase Subunit III; Cytochrome-C Oxidase Subunit III; Cytochrome C Mono- And Diheme Variant; Cytochrome C Subfamily; Cytochrome C Oxidase CcoP Subunit; FixP2 Diheme C-Type Cytochrome; Class I Cytochrome C; Cytochrome C Mono- And Diheme Variants; FixP Protein; Cytochrome Oxidase Component Cytochrome C Protein; Cytochrome C Oxidase Cbb3-Type Di-Heme Subunit III; FixP3 Cytochrome C Oxidase Membrane Anchored Subunit; Gluconate 2-Dehydrogenase; Cytochrome Cbb3 Oxidase Diheme Subunit Membrane-Bound CcoP; Cbb3-Type Cytochrome C Oxidase Subunit CcoP; Cytochrome C Oxidase; Membrane-Anchored Cbb3 Cytochrome Oxidase Subunit; Cytochrome C Oxidase Transmembrane Protein; Cytochrome C Oxidase Diheme Subunit Membrane-Bound; Cytochrome C Oxidase Protein FixP Chain; Cbb3 Oxidase Subunit III; Cytochrome C Oxidase FixP Chain Protein; Diheme Cytochrome C

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSTTQDSHHGKVDAATGVSTTGHEWDGISELNNPLPRWWLWVWYACIVWAIGYWILYPAWPLVSSATPGLLGWHSRSAVQ
VQLTDLQALRAESAAKLANASLEQIEQTPALLTLARAQGRVAFADNCAPCHGAGGGGATGFPNLNDDDWLWGGSLEQIQQ
TIQYGIRSGDAEARTGSMPAFGRDGILQKPEISAVADYVRTLSGIAQPGADFAKGKEVFAANCAACHGDDGKGNQELGAP
NLTDGIWLYGSDKATIEYGIVNGRGNVMPAWHARLEPTTVKALTVYVHSLGGGR

Sequences:

>Translated_294_residues
MSTTQDSHHGKVDAATGVSTTGHEWDGISELNNPLPRWWLWVWYACIVWAIGYWILYPAWPLVSSATPGLLGWHSRSAVQ
VQLTDLQALRAESAAKLANASLEQIEQTPALLTLARAQGRVAFADNCAPCHGAGGGGATGFPNLNDDDWLWGGSLEQIQQ
TIQYGIRSGDAEARTGSMPAFGRDGILQKPEISAVADYVRTLSGIAQPGADFAKGKEVFAANCAACHGDDGKGNQELGAP
NLTDGIWLYGSDKATIEYGIVNGRGNVMPAWHARLEPTTVKALTVYVHSLGGGR
>Mature_293_residues
STTQDSHHGKVDAATGVSTTGHEWDGISELNNPLPRWWLWVWYACIVWAIGYWILYPAWPLVSSATPGLLGWHSRSAVQV
QLTDLQALRAESAAKLANASLEQIEQTPALLTLARAQGRVAFADNCAPCHGAGGGGATGFPNLNDDDWLWGGSLEQIQQT
IQYGIRSGDAEARTGSMPAFGRDGILQKPEISAVADYVRTLSGIAQPGADFAKGKEVFAANCAACHGDDGKGNQELGAPN
LTDGIWLYGSDKATIEYGIVNGRGNVMPAWHARLEPTTVKALTVYVHSLGGGR

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 31353; Mature: 31222

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTQDSHHGKVDAATGVSTTGHEWDGISELNNPLPRWWLWVWYACIVWAIGYWILYPAW
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
PLVSSATPGLLGWHSRSAVQVQLTDLQALRAESAAKLANASLEQIEQTPALLTLARAQGR
HHHCCCCCCCEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
VAFADNCAPCHGAGGGGATGFPNLNDDDWLWGGSLEQIQQTIQYGIRSGDAEARTGSMPA
EEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC
FGRDGILQKPEISAVADYVRTLSGIAQPGADFAKGKEVFAANCAACHGDDGKGNQELGAP
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHEECCCCEECCCCCCCCCCCCCC
NLTDGIWLYGSDKATIEYGIVNGRGNVMPAWHARLEPTTVKALTVYVHSLGGGR
CCCCCEEEEECCCCEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STTQDSHHGKVDAATGVSTTGHEWDGISELNNPLPRWWLWVWYACIVWAIGYWILYPAW
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
PLVSSATPGLLGWHSRSAVQVQLTDLQALRAESAAKLANASLEQIEQTPALLTLARAQGR
HHHCCCCCCCEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
VAFADNCAPCHGAGGGGATGFPNLNDDDWLWGGSLEQIQQTIQYGIRSGDAEARTGSMPA
EEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC
FGRDGILQKPEISAVADYVRTLSGIAQPGADFAKGKEVFAANCAACHGDDGKGNQELGAP
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHEECCCCEECCCCCCCCCCCCCC
NLTDGIWLYGSDKATIEYGIVNGRGNVMPAWHARLEPTTVKALTVYVHSLGGGR
CCCCCEEEEECCCCEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA