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The map label for this gene is 154244409

Identifier: 154244409

GI number: 154244409

Start: 494611

End: 496320

Strand: Reverse

Name: 154244409

Synonym: Xaut_0452

Alternate gene names: NA

Gene position: 496320-494611 (Counterclockwise)

Preceding gene: 154244411

Following gene: 154244408

Centisome position: 9.35

GC content: 70.58

Gene sequence:

>1710_bases
GTGTCGATCCCCCCGCTTTCCCCCGACCAGACCCGCCTGCTGCACGACGGCTATCAGGCCCAAATGCGCGGCCTTCTGGA
TGACGCGGCCCGCCAGTATCGCAAGATCCTGAAGAAGGTGCCGGACCATCCCGACGTCATGCACCTTCTGGCCATGGTGC
GCGCGCGCCAGCATCGCACCGACGAGGCCATCGCGCTCTACCGCGCCGCCGCCGCGCTGAAGCCGCAGGACGCCAAGCTC
TGGTATAATTTCGGCCTCGCCTGCACCGCCGTGGAACGCAACCGCGAGGGTGCGGAGGCCTTCGCCCGCGCCCTGGCGCT
GGACCCCTCCCTCCCCGAGGGGATGGGCATGCTGTTTTCGGCCCGCCGCTCGGTCTGCGACTGGCGGGACGACGCTCAGC
TTCTGGCGGCCATCGCCCGCGCCGGGGACCCGGCGAGGCCGGAGATCCCGCCCTTCTTCACCCTGTGGCTCGACGACCCG
GCGCTGCAGCTTGCCGCCGCGCGCCGCACCGTGGGCCGCCGCTGCGCCGGCATCGTTCCGACGCCGCTCCCCGCCCGCGC
GCCAACCGACGGACGGGTGCGCATCGGCTACCTGTCGGCCGATTTTCGCAACCACCCGACCACCCATCTGCTGGTCCGGC
TGCTGGAGGTCCACGACCGCTCGAAGTTCGAGATCACCGCCTTCTCCATCGGCCCGAACGACGCCTCCCCGGCCCGCAAA
CGGGTGGAGGCAAGCGTCGACCGCTTCATCGATTGCGAGCGGGAGCAGCCGCTTGAAACTGCCGCACGCGCCCGCAGCCT
CGGCATCGACATCCTGGTGGATGTGATGGGCCACACCAACGGCAACCGCGTCGAGATCTTCGCCGCCCGCGCAGCGCCGG
TTCAGGTGAGCTATCTGGGCTATCCCGGCACCAGCGGCGCCGATTTCATGGATTATGTGATCGCCGACCCGTTCGTGCTG
CCGCTGGAAGATGCCCGATTCTTCAGCGAGAAGGTGGTCCAGCTTCCCGATACCTACCAGCCCAATGACCCCACCCTCGC
CCTCGCCGCGCGCCCCGGCCGGGCGGAATGCGGCCTGCCGGACACCGGCTTCGTGTTCTGCGCCTTCAACAATACGCGCA
AGCTCGATCCCGCCACCTTCGCCCTCTGGCTGCGCCTGCTGATGGAGGTGCCGGGCAGCGTGCTGTGGCTGCTGGCCGGC
GACGACGCCCGCGCCAATCTCAGGCGCGAAGCCGAGGCCGCAGGCGTCGCGCCTGAGCGACTCGTCTTCGCACCGCACCG
CCCCCTGCCGGAGCATTTGGCCCGCATGGCGCTGGCGGACCTGTTCCTCGACACCTTTCCCTACACCGCCCACACCACGG
CCTCGGACGCGCTCCGGGTCGGGCTGCCGCTGGTGACGCGGACCGGCCGCTCCTTCGCCTCGAAGGTCGCCGGCCGCCTG
CTGCAATTGTCCGGAGTGGGAGACCTCGTCACCGACACGCCTGCCGCCTACGAGGCGCTGGCCCTGTCGCTGGCCCGCGA
CCCGGCCCGGCTCGCCGCCCTCCGGGCAAGGCTCCAGGACAGCGCGGCGCGGGCTCGACTGTTTGACATCCAGCGCTACC
GCGCTCAGATCGAAGCGGCCTATCTCGCCATGATGGAGCGGGCCATGGCCGGCGCTGCGCCGGACCATATCATCATCGCG
CCCTCCGCCGCCGAGGGCCCCGGCGCCTGA

Upstream 100 bases:

>100_bases
GCGTCCAATCGCATCCCGCTGGCGCCAAGCTGGCGTAACTCGCCGGCGCAACTCGTCGGCGCAATTCGCGCGTGCGGTCA
GAACCTTCCGAAGCCTCTTC

Downstream 100 bases:

>100_bases
ATCCCCAAGGCCCGGAACCGTGCGGCGCCCTCGGCTATCGCCTCGATCCCGCCCATGCTAGAGCACCCGCCGATCCTCTT
GCGGCACGGGCTGGTCCGAT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_1 Repeat-Containing Protein; Methyltransferase Type; TPR Repeat Protein; TPR Domain Protein; FkbM Family Methyltransferase; Glycosyl Transferase Family Protein; Tetratricopeptide Repeat-Containing Protein; SPY Protein; Glycosyltransferase TPR Domain Protein; Tetratricopeptide Repeat Domain Protein; Tpr Repeat-Containing Protein; Porphyrin Biosynthesis Protein; Transferase; Tetratricopeptide Repeat Family Protein; Sulfotransferase; TPR Domain/SEC-C Motif Domain Protein; TPR Repeat; O-Linked N-Acetylglucosamine TransferaNDLY Family; Tetratricopeptide Repeat Protein; O-Linked Acetylglucosamine Transferase; Glycosyltransferase TPR Domain-Containing Protein; Methyltransferase Regulatory Domain; Tetratricopeptide Domain Protein; TPR Repeat Domain-Containing Protein; TPR Repeat-Containing Glycosyl Transferase; O-Linked GLCNAC Transferase; Glycosyl Transferase TPR Repeat Protein

Number of amino acids: Translated: 569; Mature: 568

Protein sequence:

>569_residues
MSIPPLSPDQTRLLHDGYQAQMRGLLDDAARQYRKILKKVPDHPDVMHLLAMVRARQHRTDEAIALYRAAAALKPQDAKL
WYNFGLACTAVERNREGAEAFARALALDPSLPEGMGMLFSARRSVCDWRDDAQLLAAIARAGDPARPEIPPFFTLWLDDP
ALQLAAARRTVGRRCAGIVPTPLPARAPTDGRVRIGYLSADFRNHPTTHLLVRLLEVHDRSKFEITAFSIGPNDASPARK
RVEASVDRFIDCEREQPLETAARARSLGIDILVDVMGHTNGNRVEIFAARAAPVQVSYLGYPGTSGADFMDYVIADPFVL
PLEDARFFSEKVVQLPDTYQPNDPTLALAARPGRAECGLPDTGFVFCAFNNTRKLDPATFALWLRLLMEVPGSVLWLLAG
DDARANLRREAEAAGVAPERLVFAPHRPLPEHLARMALADLFLDTFPYTAHTTASDALRVGLPLVTRTGRSFASKVAGRL
LQLSGVGDLVTDTPAAYEALALSLARDPARLAALRARLQDSAARARLFDIQRYRAQIEAAYLAMMERAMAGAAPDHIIIA
PSAAEGPGA

Sequences:

>Translated_569_residues
MSIPPLSPDQTRLLHDGYQAQMRGLLDDAARQYRKILKKVPDHPDVMHLLAMVRARQHRTDEAIALYRAAAALKPQDAKL
WYNFGLACTAVERNREGAEAFARALALDPSLPEGMGMLFSARRSVCDWRDDAQLLAAIARAGDPARPEIPPFFTLWLDDP
ALQLAAARRTVGRRCAGIVPTPLPARAPTDGRVRIGYLSADFRNHPTTHLLVRLLEVHDRSKFEITAFSIGPNDASPARK
RVEASVDRFIDCEREQPLETAARARSLGIDILVDVMGHTNGNRVEIFAARAAPVQVSYLGYPGTSGADFMDYVIADPFVL
PLEDARFFSEKVVQLPDTYQPNDPTLALAARPGRAECGLPDTGFVFCAFNNTRKLDPATFALWLRLLMEVPGSVLWLLAG
DDARANLRREAEAAGVAPERLVFAPHRPLPEHLARMALADLFLDTFPYTAHTTASDALRVGLPLVTRTGRSFASKVAGRL
LQLSGVGDLVTDTPAAYEALALSLARDPARLAALRARLQDSAARARLFDIQRYRAQIEAAYLAMMERAMAGAAPDHIIIA
PSAAEGPGA
>Mature_568_residues
SIPPLSPDQTRLLHDGYQAQMRGLLDDAARQYRKILKKVPDHPDVMHLLAMVRARQHRTDEAIALYRAAAALKPQDAKLW
YNFGLACTAVERNREGAEAFARALALDPSLPEGMGMLFSARRSVCDWRDDAQLLAAIARAGDPARPEIPPFFTLWLDDPA
LQLAAARRTVGRRCAGIVPTPLPARAPTDGRVRIGYLSADFRNHPTTHLLVRLLEVHDRSKFEITAFSIGPNDASPARKR
VEASVDRFIDCEREQPLETAARARSLGIDILVDVMGHTNGNRVEIFAARAAPVQVSYLGYPGTSGADFMDYVIADPFVLP
LEDARFFSEKVVQLPDTYQPNDPTLALAARPGRAECGLPDTGFVFCAFNNTRKLDPATFALWLRLLMEVPGSVLWLLAGD
DARANLRREAEAAGVAPERLVFAPHRPLPEHLARMALADLFLDTFPYTAHTTASDALRVGLPLVTRTGRSFASKVAGRLL
QLSGVGDLVTDTPAAYEALALSLARDPARLAALRARLQDSAARARLFDIQRYRAQIEAAYLAMMERAMAGAAPDHIIIAP
SAAEGPGA

Specific function: Unknown

COG id: COG3914

COG function: function code O; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=393, Percent_Identity=31.2977099236641, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI32307148, Length=393, Percent_Identity=31.2977099236641, Blast_Score=166, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI115532690, Length=337, Percent_Identity=30.5637982195846, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI115532692, Length=337, Percent_Identity=30.5637982195846, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI17647755, Length=366, Percent_Identity=33.3333333333333, Blast_Score=180, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24585827, Length=366, Percent_Identity=33.3333333333333, Blast_Score=180, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24585829, Length=366, Percent_Identity=33.3333333333333, Blast_Score=180, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62236; Mature: 62105

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPPLSPDQTRLLHDGYQAQMRGLLDDAARQYRKILKKVPDHPDVMHLLAMVRARQHRT
CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
DEAIALYRAAAALKPQDAKLWYNFGLACTAVERNREGAEAFARALALDPSLPEGMGMLFS
HHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHH
ARRSVCDWRDDAQLLAAIARAGDPARPEIPPFFTLWLDDPALQLAAARRTVGRRCAGIVP
HHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCC
TPLPARAPTDGRVRIGYLSADFRNHPTTHLLVRLLEVHDRSKFEITAFSIGPNDASPARK
CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHH
RVEASVDRFIDCEREQPLETAARARSLGIDILVDVMGHTNGNRVEIFAARAAPVQVSYLG
HHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHEEEECCCCCCCEEEEEEECCCCEEEEEEC
YPGTSGADFMDYVIADPFVLPLEDARFFSEKVVQLPDTYQPNDPTLALAARPGRAECGLP
CCCCCCCHHHHHHHCCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC
DTGFVFCAFNNTRKLDPATFALWLRLLMEVPGSVLWLLAGDDARANLRREAEAAGVAPER
CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCHH
LVFAPHRPLPEHLARMALADLFLDTFPYTAHTTASDALRVGLPLVTRTGRSFASKVAGRL
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHHHH
LQLSGVGDLVTDTPAAYEALALSLARDPARLAALRARLQDSAARARLFDIQRYRAQIEAA
EEECCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLAMMERAMAGAAPDHIIIAPSAAEGPGA
HHHHHHHHHHCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
SIPPLSPDQTRLLHDGYQAQMRGLLDDAARQYRKILKKVPDHPDVMHLLAMVRARQHRT
CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
DEAIALYRAAAALKPQDAKLWYNFGLACTAVERNREGAEAFARALALDPSLPEGMGMLFS
HHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHH
ARRSVCDWRDDAQLLAAIARAGDPARPEIPPFFTLWLDDPALQLAAARRTVGRRCAGIVP
HHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCC
TPLPARAPTDGRVRIGYLSADFRNHPTTHLLVRLLEVHDRSKFEITAFSIGPNDASPARK
CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHH
RVEASVDRFIDCEREQPLETAARARSLGIDILVDVMGHTNGNRVEIFAARAAPVQVSYLG
HHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHEEEECCCCCCCEEEEEEECCCCEEEEEEC
YPGTSGADFMDYVIADPFVLPLEDARFFSEKVVQLPDTYQPNDPTLALAARPGRAECGLP
CCCCCCCHHHHHHHCCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC
DTGFVFCAFNNTRKLDPATFALWLRLLMEVPGSVLWLLAGDDARANLRREAEAAGVAPER
CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCHH
LVFAPHRPLPEHLARMALADLFLDTFPYTAHTTASDALRVGLPLVTRTGRSFASKVAGRL
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHHHH
LQLSGVGDLVTDTPAAYEALALSLARDPARLAALRARLQDSAARARLFDIQRYRAQIEAA
EEECCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLAMMERAMAGAAPDHIIIAPSAAEGPGA
HHHHHHHHHHCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA