Click here to switch to the map view.

The map label for this gene is aspC [H]

Identifier: 154244358

GI number: 154244358

Start: 429149

End: 430336

Strand: Reverse

Name: aspC [H]

Synonym: Xaut_0401

Alternate gene names: 154244358

Gene position: 430336-429149 (Counterclockwise)

Preceding gene: 154244360

Following gene: 154244357

Centisome position: 8.11

GC content: 68.27

Gene sequence:

>1188_bases
ATGCTGATCACCACCGCCCCCTTCGACCGCATCGGCGAGGAGAACGCCTTCGCCGTGCTGGCGCGCGCCACGGCACTGGC
CGGGCAAGGGCGGTCCATCCTCAACCTGGGCATCGGCCAGCCGGATTTCCGCACTCCGGACCATATCGTCGAGGCCGCGG
TGAAAGCGCTGCGCGACGGCCAGCACGGCTACACCCCCTCGGTGGGCATCCTGCCGCTGCGCGAGGCGGTGGCCGCCGAC
CTCAACCGCCGCTACGGCGTGGAGGTGGACCCGGACCTGGTGATGATCATGCCCGGCGGCAAGGTCACCATGTATGCGGC
CATCCGCCTGTTCGGCGAGCCGGGGGCGGAGATCCTCTATCCGGACCCCGGCTTCCCCATCTACCGCTCCATGATCGAGC
ACACCGGCGCCACCCCTGTCCCGGTGCCGATCCGCGAGGAGAACGGCTTCGCCTTCTCGGCGGAGGAGACGCTGGCGCTG
ATCACGCCGAAGACGCGCCTGCTCATCATCAACTCGCCGGCCAATCCCACCGGCGGCGTCACCCCAGCGGCCGAAATTGA
CAAGCTGGTGAAGGGCCTTGCCGCCCACCCCCATGTGGCGCTGATGTCGGATGAGATCTACGACCGCTTCCTGTTCGACG
GCGAGGAACACCGCACCCTCCTGGCCTATCCGCAGATCCGTGACCGGCTGATCCTGCTCAACGGCTGGTCCAAGACCTAT
GCCATGACCGGCTGGCGTCTCGGCTATTCCATCTGGCCGAAGGACCTCTACGACAAGGTGCGCAAGCTGGCGGTGAATTG
CTGGAGCTGCGTGAACGCTGCCACCCAATATGCCGGCATCGCCGCCCTTGAAGGCCCGCAGGATGCGGTGGACGCGATGA
CCGCCGAGTTCGACGCCCGCCGCCGCATCGTGGTGGACGGGCTGAACGCCCTGCCGGGGGTGCGCTGCGCGACGCCGAAG
GGCGCCTTCTACGCCTTCCCCAACGTCTCCGGCACCGGCTGGAGCGAGGCCAAGAAGCTCGCCTCCGCCCTGCTGGAGGA
GGCGGGCGTCGCGGTCATCGGCGGGCCGGATTTCGGCGTTTATGGCGAAGGCTATCTCCGGCTGTCCTACGCCACCTCGC
GGGAGAATATCGCGGCCGCGCTAGCGCGCATGGGCGACTTCCTCGCCGCCAACCGCAAGGTGGCCTGA

Upstream 100 bases:

>100_bases
GCCACTCCCCTCCCCCTTCCATCTTTGCTATCCAGTGCCTCCCCCGCCGAGCGGCGCTCAAGACGCCGGACGTGGGGCGG
TTATCCCAAGGAGCCCCGCC

Downstream 100 bases:

>100_bases
GGCGTGGCGGCGCGCACCGCGCGGGGGCGATGGCTCGGCCTGGCCGTCCTCGCGCTCGCGGTGAGTCCGCTGATCATGCT
CGCCATCGCCCCACCGCCGG

Product: class I and II aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MLITTAPFDRIGEENAFAVLARATALAGQGRSILNLGIGQPDFRTPDHIVEAAVKALRDGQHGYTPSVGILPLREAVAAD
LNRRYGVEVDPDLVMIMPGGKVTMYAAIRLFGEPGAEILYPDPGFPIYRSMIEHTGATPVPVPIREENGFAFSAEETLAL
ITPKTRLLIINSPANPTGGVTPAAEIDKLVKGLAAHPHVALMSDEIYDRFLFDGEEHRTLLAYPQIRDRLILLNGWSKTY
AMTGWRLGYSIWPKDLYDKVRKLAVNCWSCVNAATQYAGIAALEGPQDAVDAMTAEFDARRRIVVDGLNALPGVRCATPK
GAFYAFPNVSGTGWSEAKKLASALLEEAGVAVIGGPDFGVYGEGYLRLSYATSRENIAAALARMGDFLAANRKVA

Sequences:

>Translated_395_residues
MLITTAPFDRIGEENAFAVLARATALAGQGRSILNLGIGQPDFRTPDHIVEAAVKALRDGQHGYTPSVGILPLREAVAAD
LNRRYGVEVDPDLVMIMPGGKVTMYAAIRLFGEPGAEILYPDPGFPIYRSMIEHTGATPVPVPIREENGFAFSAEETLAL
ITPKTRLLIINSPANPTGGVTPAAEIDKLVKGLAAHPHVALMSDEIYDRFLFDGEEHRTLLAYPQIRDRLILLNGWSKTY
AMTGWRLGYSIWPKDLYDKVRKLAVNCWSCVNAATQYAGIAALEGPQDAVDAMTAEFDARRRIVVDGLNALPGVRCATPK
GAFYAFPNVSGTGWSEAKKLASALLEEAGVAVIGGPDFGVYGEGYLRLSYATSRENIAAALARMGDFLAANRKVA
>Mature_395_residues
MLITTAPFDRIGEENAFAVLARATALAGQGRSILNLGIGQPDFRTPDHIVEAAVKALRDGQHGYTPSVGILPLREAVAAD
LNRRYGVEVDPDLVMIMPGGKVTMYAAIRLFGEPGAEILYPDPGFPIYRSMIEHTGATPVPVPIREENGFAFSAEETLAL
ITPKTRLLIINSPANPTGGVTPAAEIDKLVKGLAAHPHVALMSDEIYDRFLFDGEEHRTLLAYPQIRDRLILLNGWSKTY
AMTGWRLGYSIWPKDLYDKVRKLAVNCWSCVNAATQYAGIAALEGPQDAVDAMTAEFDARRRIVVDGLNALPGVRCATPK
GAFYAFPNVSGTGWSEAKKLASALLEEAGVAVIGGPDFGVYGEGYLRLSYATSRENIAAALARMGDFLAANRKVA

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713254, Length=317, Percent_Identity=24.9211356466877, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI56713256, Length=317, Percent_Identity=24.9211356466877, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI95147551, Length=319, Percent_Identity=26.0188087774295, Blast_Score=115, Evalue=9e-26,
Organism=Homo sapiens, GI169881279, Length=319, Percent_Identity=26.0188087774295, Blast_Score=115, Evalue=9e-26,
Organism=Homo sapiens, GI4507369, Length=381, Percent_Identity=22.5721784776903, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI215599424, Length=366, Percent_Identity=24.8633879781421, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI19263340, Length=366, Percent_Identity=24.8633879781421, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI169881281, Length=316, Percent_Identity=22.4683544303797, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI4885351, Length=379, Percent_Identity=26.1213720316623, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI1786816, Length=371, Percent_Identity=29.1105121293801, Blast_Score=161, Evalue=7e-41,
Organism=Escherichia coli, GI1788722, Length=359, Percent_Identity=30.9192200557103, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1788627, Length=389, Percent_Identity=27.2493573264781, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787909, Length=368, Percent_Identity=23.3695652173913, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71994472, Length=283, Percent_Identity=26.8551236749117, Blast_Score=118, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI71994476, Length=283, Percent_Identity=26.8551236749117, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17567663, Length=380, Percent_Identity=26.0526315789474, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17567369, Length=339, Percent_Identity=23.8938053097345, Blast_Score=99, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6322401, Length=405, Percent_Identity=23.9506172839506, Blast_Score=86, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6320317, Length=338, Percent_Identity=23.0769230769231, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28573069, Length=332, Percent_Identity=27.1084337349398, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24646114, Length=332, Percent_Identity=27.1084337349398, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI28573067, Length=332, Percent_Identity=27.1084337349398, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI28573065, Length=332, Percent_Identity=27.1084337349398, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI18859735, Length=380, Percent_Identity=23.6842105263158, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24641770, Length=403, Percent_Identity=24.8138957816377, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641760, Length=403, Percent_Identity=24.8138957816377, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641768, Length=403, Percent_Identity=24.8138957816377, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641766, Length=403, Percent_Identity=24.8138957816377, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641764, Length=403, Percent_Identity=24.8138957816377, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45551451, Length=403, Percent_Identity=24.8138957816377, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42617; Mature: 42617

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLITTAPFDRIGEENAFAVLARATALAGQGRSILNLGIGQPDFRTPDHIVEAAVKALRDG
CEEECCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
QHGYTPSVGILPLREAVAADLNRRYGVEVDPDLVMIMPGGKVTMYAAIRLFGEPGAEILY
CCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCEEEEECCCCEEEEEEEEEECCCCCEEEE
PDPGFPIYRSMIEHTGATPVPVPIREENGFAFSAEETLALITPKTRLLIINSPANPTGGV
CCCCCHHHHHHHHHCCCCCCCEEEECCCCEEEECCCEEEEECCCEEEEEEECCCCCCCCC
TPAAEIDKLVKGLAAHPHVALMSDEIYDRFLFDGEEHRTLLAYPQIRDRLILLNGWSKTY
CCHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCCE
AMTGWRLGYSIWPKDLYDKVRKLAVNCWSCVNAATQYAGIAALEGPQDAVDAMTAEFDAR
EECCEEECCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHCC
RRIVVDGLNALPGVRCATPKGAFYAFPNVSGTGWSEAKKLASALLEEAGVAVIGGPDFGV
CEEEEECCCCCCCCEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCC
YGEGYLRLSYATSRENIAAALARMGDFLAANRKVA
CCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLITTAPFDRIGEENAFAVLARATALAGQGRSILNLGIGQPDFRTPDHIVEAAVKALRDG
CEEECCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
QHGYTPSVGILPLREAVAADLNRRYGVEVDPDLVMIMPGGKVTMYAAIRLFGEPGAEILY
CCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCEEEEECCCCEEEEEEEEEECCCCCEEEE
PDPGFPIYRSMIEHTGATPVPVPIREENGFAFSAEETLALITPKTRLLIINSPANPTGGV
CCCCCHHHHHHHHHCCCCCCCEEEECCCCEEEECCCEEEEECCCEEEEEEECCCCCCCCC
TPAAEIDKLVKGLAAHPHVALMSDEIYDRFLFDGEEHRTLLAYPQIRDRLILLNGWSKTY
CCHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCCE
AMTGWRLGYSIWPKDLYDKVRKLAVNCWSCVNAATQYAGIAALEGPQDAVDAMTAEFDAR
EECCEEECCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHCC
RRIVVDGLNALPGVRCATPKGAFYAFPNVSGTGWSEAKKLASALLEEAGVAVIGGPDFGV
CEEEEECCCCCCCCEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCC
YGEGYLRLSYATSRENIAAALARMGDFLAANRKVA
CCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]