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The map label for this gene is flaC [H]

Identifier: 153952656

GI number: 153952656

Start: 1133478

End: 1134218

Strand: Direct

Name: flaC [H]

Synonym: JJD26997_1286

Alternate gene names: 153952656

Gene position: 1133478-1134218 (Clockwise)

Preceding gene: 153952153

Following gene: 153951807

Centisome position: 61.43

GC content: 32.12

Gene sequence:

>741_bases
ATGATGATCTCTGATGCAACTATGATGCAACAAAATTATTATTTAAACAATGCACAAAAAGCTAGCGATAAAGCTTTAGA
AAATATTGCGGCTGTTCGTGCAATAAGTGGAGTTGATAGTGCTAATTTAACTATTGCTGATTCTTTAAGATCTCAATCAA
GCACTATAGATCAAGGTGTCGCAAATGCTTATGATGCTATAGGGGTTTTACAAATTGCAGATGCTAGCCTTACCAATATC
TCTCGAAGCGCAGATAGACTTAATGAACTTTCAGTAAAAATGAACAATGCTGCACTTAATGATTCTCAAAAAGGAATGCT
AAGGACAGAAGCAAAACGCATACAAGAATCCATCAATGATTCTTTTAATAATGCAACTTATAATGGAAAAAATGTCTTCC
AAACAATGAATTTTGTAGTGGGCAGCGGAACTGAAACTATAAATTTAAATCCATTAGCAACAGGTGGATTAAGCATAGAT
AATCAAGATAGTATCACAAATTTTATGGATCAACTTGGAAGTTTAAGAAGTGAAATAGGCTCAAGTATCAATGCCATCAC
ATCAAATATTAATGCAAGTGTTCAAAATAGCATCAACTCAAAAGCAGCTGAAAATAATTTACTAAATAATGACATGGCAA
AAAATGTTAATGAATTTAACGCCAATTATCTAAAAGAAAATGTTGCTTTTGTTACTGTACAAAACCAGCTTCAAAGCAAA
ATTGCTAATTTGCTACAATAA

Upstream 100 bases:

>100_bases
AAATCATCTTGATAATGCAAGTTTTTCTATATTTCTTAAGCTTTAAAATAGCAAAAAAATGATAAAATATTAAATAAATC
CAAAAGAGAAGGAGTAGGCC

Downstream 100 bases:

>100_bases
TATAAGCCCTAAAATAGGGCTTATTTCTTTATCAAAATGACTTTAGAGCAAATTTTAGAAAAAACCAAAAATATTCGTCT
TGTAGCCGCAAGCAAGTATG

Product: flagellin subunit protein FlaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MMISDATMMQQNYYLNNAQKASDKALENIAAVRAISGVDSANLTIADSLRSQSSTIDQGVANAYDAIGVLQIADASLTNI
SRSADRLNELSVKMNNAALNDSQKGMLRTEAKRIQESINDSFNNATYNGKNVFQTMNFVVGSGTETINLNPLATGGLSID
NQDSITNFMDQLGSLRSEIGSSINAITSNINASVQNSINSKAAENNLLNNDMAKNVNEFNANYLKENVAFVTVQNQLQSK
IANLLQ

Sequences:

>Translated_246_residues
MMISDATMMQQNYYLNNAQKASDKALENIAAVRAISGVDSANLTIADSLRSQSSTIDQGVANAYDAIGVLQIADASLTNI
SRSADRLNELSVKMNNAALNDSQKGMLRTEAKRIQESINDSFNNATYNGKNVFQTMNFVVGSGTETINLNPLATGGLSID
NQDSITNFMDQLGSLRSEIGSSINAITSNINASVQNSINSKAAENNLLNNDMAKNVNEFNANYLKENVAFVTVQNQLQSK
IANLLQ
>Mature_246_residues
MMISDATMMQQNYYLNNAQKASDKALENIAAVRAISGVDSANLTIADSLRSQSSTIDQGVANAYDAIGVLQIADASLTNI
SRSADRLNELSVKMNNAALNDSQKGMLRTEAKRIQESINDSFNNATYNGKNVFQTMNFVVGSGTETINLNPLATGGLSID
NQDSITNFMDQLGSLRSEIGSSINAITSNINASVQNSINSKAAENNLLNNDMAKNVNEFNANYLKENVAFVTVQNQLQSK
IANLLQ

Specific function: Unknown

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 26514; Mature: 26514

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMISDATMMQQNYYLNNAQKASDKALENIAAVRAISGVDSANLTIADSLRSQSSTIDQGV
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH
ANAYDAIGVLQIADASLTNISRSADRLNELSVKMNNAALNDSQKGMLRTEAKRIQESIND
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHH
SFNNATYNGKNVFQTMNFVVGSGTETINLNPLATGGLSIDNQDSITNFMDQLGSLRSEIG
HHCCCCCCCHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SSINAITSNINASVQNSINSKAAENNLLNNDMAKNVNEFNANYLKENVAFVTVQNQLQSK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHH
IANLLQ
HHHHCC
>Mature Secondary Structure
MMISDATMMQQNYYLNNAQKASDKALENIAAVRAISGVDSANLTIADSLRSQSSTIDQGV
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH
ANAYDAIGVLQIADASLTNISRSADRLNELSVKMNNAALNDSQKGMLRTEAKRIQESIND
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHH
SFNNATYNGKNVFQTMNFVVGSGTETINLNPLATGGLSIDNQDSITNFMDQLGSLRSEIG
HHCCCCCCCHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SSINAITSNINASVQNSINSKAAENNLLNNDMAKNVNEFNANYLKENVAFVTVQNQLQSK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHH
IANLLQ
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]