Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
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Accession | NC_009707 |
Length | 1,845,106 |
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The map label for this gene is 153952273
Identifier: 153952273
GI number: 153952273
Start: 1182963
End: 1184066
Strand: Direct
Name: 153952273
Synonym: JJD26997_1339
Alternate gene names: NA
Gene position: 1182963-1184066 (Clockwise)
Preceding gene: 153951129
Following gene: 153951489
Centisome position: 64.11
GC content: 21.65
Gene sequence:
>1104_bases ATGAAAATTAATTCATTAAATAAAATAAATTTTATAAAATCCACAGATTTACTTTATGCCCAAAGAACGGGAATATTCAA AGAAGACGAACTTTTTAACAATTTAACCGCAGATTTTAAGCTAAGCAAACCCTTTGACTATCAAATAGCTTTTTTTAAAC ATAGTGAAATTTATCATTGTTTTTTAGCACCTGTTTGCAAATTGAGAAAAAGTCGTTTTTGCTTTCCTGAACCTTTAATT TTTCAAGCTTTATTTGATGAAAGATTTATTGAGGAAAGTGATTATTGTGTTTTAAATTTATATGATCAAACTTTATATTT ATATTTTTACCAAGAAGGAAAATTTAGCAATCTTAAAAAAATCGAAAATTTCAACCCAAGTAATATGGATTTATTTTTTA AACAAAATCGATTTATAGAAATTTTAAAACACTATGAAAGCAAATTGCTACTTTATCAGGATTTGGATACAATCAAACAT TACTTCTCATCTCAAATAAAATGTTTAAATCTAAATGATATTCTTGATAAAAATAGTTTATTGAAATTAAGTTCATATAG TATAAAAAATCTAGATCAAAATTGTAATTTTATCAAGCATAATAAAATAAAAATATCTATTTCTTTTAAAATTATATTAT TATTTATTTTTAGCTTTAGTCTTAGTATGATGATTTTATTATTTAAAGATTTTATAGAGTACAAACAAAATAAGGAAATT CAAAATAAAAATTTTATCATACAAGAAGAAATTTTGAAACTAAAACAAGATAAGCAAAGATTATTAACAAACATACAAGA TTTAAACTTTACTCTTTCTAATAAAATATCATCTACACAACAACAATTTCATATTTTATCCACCATAACAAAAGAAATCA ATTTAGACAAAAATAAAGCAATCATTCTAAATCAAATCATATCATGGCTTAACTCCAATGAACTTAAAATCACAAATCTT GAATTTGAACAAACAAAAATCTTTCTTTCTTTTATCGATGAAAATTACTTTAAAAGAGCATTGAAAAATCTAAATTCAGC TTTTAAAATTTTTGATAAAAATGAAGAAACATTTAATATCATATTAGAAGTCATACATGAGTAA
Upstream 100 bases:
>100_bases ATTTCAAAACTTGCCCAAAAAAAGGTACTTTTAAAGCTTTTTGTAACAGTGAAAAAAAACTGGCAAAAAGATGAAGAATT TTTAAAAAAACTTCTAAATG
Downstream 100 bases:
>100_bases AATAGAAATATTTTTGCAAAATTTAAATCCTAGGGAAAAATTTCTTTTTATTTCTTTTATCTGCCTTTGTGCTTTGTTTT TAGCTTTTAAAATTCACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MKINSLNKINFIKSTDLLYAQRTGIFKEDELFNNLTADFKLSKPFDYQIAFFKHSEIYHCFLAPVCKLRKSRFCFPEPLI FQALFDERFIEESDYCVLNLYDQTLYLYFYQEGKFSNLKKIENFNPSNMDLFFKQNRFIEILKHYESKLLLYQDLDTIKH YFSSQIKCLNLNDILDKNSLLKLSSYSIKNLDQNCNFIKHNKIKISISFKIILLFIFSFSLSMMILLFKDFIEYKQNKEI QNKNFIIQEEILKLKQDKQRLLTNIQDLNFTLSNKISSTQQQFHILSTITKEINLDKNKAIILNQIISWLNSNELKITNL EFEQTKIFLSFIDENYFKRALKNLNSAFKIFDKNEETFNIILEVIHE
Sequences:
>Translated_367_residues MKINSLNKINFIKSTDLLYAQRTGIFKEDELFNNLTADFKLSKPFDYQIAFFKHSEIYHCFLAPVCKLRKSRFCFPEPLI FQALFDERFIEESDYCVLNLYDQTLYLYFYQEGKFSNLKKIENFNPSNMDLFFKQNRFIEILKHYESKLLLYQDLDTIKH YFSSQIKCLNLNDILDKNSLLKLSSYSIKNLDQNCNFIKHNKIKISISFKIILLFIFSFSLSMMILLFKDFIEYKQNKEI QNKNFIIQEEILKLKQDKQRLLTNIQDLNFTLSNKISSTQQQFHILSTITKEINLDKNKAIILNQIISWLNSNELKITNL EFEQTKIFLSFIDENYFKRALKNLNSAFKIFDKNEETFNIILEVIHE >Mature_367_residues MKINSLNKINFIKSTDLLYAQRTGIFKEDELFNNLTADFKLSKPFDYQIAFFKHSEIYHCFLAPVCKLRKSRFCFPEPLI FQALFDERFIEESDYCVLNLYDQTLYLYFYQEGKFSNLKKIENFNPSNMDLFFKQNRFIEILKHYESKLLLYQDLDTIKH YFSSQIKCLNLNDILDKNSLLKLSSYSIKNLDQNCNFIKHNKIKISISFKIILLFIFSFSLSMMILLFKDFIEYKQNKEI QNKNFIIQEEILKLKQDKQRLLTNIQDLNFTLSNKISSTQQQFHILSTITKEINLDKNKAIILNQIISWLNSNELKITNL EFEQTKIFLSFIDENYFKRALKNLNSAFKIFDKNEETFNIILEVIHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43971; Mature: 43971
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINSLNKINFIKSTDLLYAQRTGIFKEDELFNNLTADFKLSKPFDYQIAFFKHSEIYHC CCCCCCCCEEEEECCCHHHHHHCCCCCHHHHHHCCCCCEEECCCCCEEEEEEECCCHHHH FLAPVCKLRKSRFCFPEPLIFQALFDERFIEESDYCVLNLYDQTLYLYFYQEGKFSNLKK HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEEECCCCCCHHH IENFNPSNMDLFFKQNRFIEILKHYESKLLLYQDLDTIKHYFSSQIKCLNLNDILDKNSL HCCCCCCCCEEEEECCHHHHHHHHHHHHEEHHHHHHHHHHHHCCCEEEEEHHHHHCCCCE LKLSSYSIKNLDQNCNFIKHNKIKISISFKIILLFIFSFSLSMMILLFKDFIEYKQNKEI EEECCCCHHCCCCCCCEEEECEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QNKNFIIQEEILKLKQDKQRLLTNIQDLNFTLSNKISSTQQQFHILSTITKEINLDKNKA CCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCH IILNQIISWLNSNELKITNLEFEQTKIFLSFIDENYFKRALKNLNSAFKIFDKNEETFNI HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHH ILEVIHE HHHHHCC >Mature Secondary Structure MKINSLNKINFIKSTDLLYAQRTGIFKEDELFNNLTADFKLSKPFDYQIAFFKHSEIYHC CCCCCCCCEEEEECCCHHHHHHCCCCCHHHHHHCCCCCEEECCCCCEEEEEEECCCHHHH FLAPVCKLRKSRFCFPEPLIFQALFDERFIEESDYCVLNLYDQTLYLYFYQEGKFSNLKK HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEEECCCCCCHHH IENFNPSNMDLFFKQNRFIEILKHYESKLLLYQDLDTIKHYFSSQIKCLNLNDILDKNSL HCCCCCCCCEEEEECCHHHHHHHHHHHHEEHHHHHHHHHHHHCCCEEEEEHHHHHCCCCE LKLSSYSIKNLDQNCNFIKHNKIKISISFKIILLFIFSFSLSMMILLFKDFIEYKQNKEI EEECCCCHHCCCCCCCEEEECEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QNKNFIIQEEILKLKQDKQRLLTNIQDLNFTLSNKISSTQQQFHILSTITKEINLDKNKA CCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCH IILNQIISWLNSNELKITNLEFEQTKIFLSFIDENYFKRALKNLNSAFKIFDKNEETFNI HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHH ILEVIHE HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA