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The map label for this gene is ybaE [H]

Identifier: 153950496

GI number: 153950496

Start: 3472029

End: 3473732

Strand: Direct

Name: ybaE [H]

Synonym: YpsIP31758_3084

Alternate gene names: 153950496

Gene position: 3472029-3473732 (Clockwise)

Preceding gene: 153949753

Following gene: 153948926

Centisome position: 73.51

GC content: 49.06

Gene sequence:

>1704_bases
ATGCGCATTATTCACCGGCTTACCCAATATGAGCGTTTATATCAAAAATTTGGTGACCACCCGGTGGCGACTACCGTGGC
TGACGTGGCTAGTTTACTCTTTTGTAGCGAACGGCATGCCCGCACCCTGATTCAGCAACTACAGATGAAGAGTTGGCTAA
GCTGGCATTCACAAGTGGGTAGAGGGAAACGAGCGCAACTGCAATGCCTGAAAAAACCTGATGCATTACGGGCTATTTAC
CTGCAACAGTTCCTTGAGCAAGGCGATCATCAGGCGGCATTCTCAATAGCACAATTGGAACCCGAGCGCCTACAGACCTT
ACTTACCCCCCATATGGGCGGACAATGGCAAGCCGATAGCCCTATTCTGCGTATCCCCTACTACCGCGAGCTGGAACCGC
TTAATCCCATGAATGCTACAGGGCGGGCAGAACAGCACCTGATTTATACTTTGCATGCTGGGCTGACACGGTTTAATACA
GGTGACCCGTTGCCTAAACCTGATTTGGCTCATCACTGGCAAATCAGCGCAGATGGCTTAACCTGGCAGTTCTTCTTACG
CAGCCAACTACGTTGGCATAATGGCGACCACATTCATGGTAAGCAATTATTGCAAACACTGGAGATTCTGCGCGCAAACC
GACGTAGCCAACCCAGTTTTGCTAATATTGTTACTATCACTCTCCCCCACGCTTTATGCCTACAATTTACCCTTTCCCAA
CCAGATTATTGGCTAGCACACCGGCTGGCTGATTTACCCTGTAGGTTTTTTCATCCAGACGATCCCTTTTTAGGTGCGGG
TCCTTTTAAATTAGCGACCTTTGATAAACATTTAGTTCGGCTAAAGCAGCACGAATTTTACCATTTGCAACATCCCTATC
TGGACATTATCGAGTACTGGATCACCCCTAGCCTGACGGTAAATTCAACAAATGGCAGTTGCCAGCATCCGGTTCGCATC
ACCATCGGCCAAGAGGAAGAGTTCCCACTGGCCCGCCCCGTACAGCGCAGCATGAGCCTCGGATTCTGCTACCTGGCTAT
TAATCGCCATCGTAGCAACCTCACTCCACAGCAAATAGCCAAGCTACTGATGTTAGTCCAAACCTCGGGTATATTAGAGG
CGCTTTCCATCAGCCGTGACGTAATAACGCCCTGCCATGAAATCCTTCCAGGCTGGCCTATTCCACAGTTTTCGACGGAT
GAAAATCCCTCCCTTCCCGCCTGTTTGGTTCTGACCTATCAACCGCCGATGGAGCTTGAGAGTGTCGCTGAGCAACTAAA
AATAGTATTAGCCGCTCATGGCTGTACATTAGAGATCCGCGCCTGCCATGATAAACAGTGGCAAGATGTTGACAAAATTA
AAGAGAGCGATTTACTGTTGGCCGATCATTTAGTCGGTGAATCGCCAGAGGCCACAATGGAGAGCTGGCTACGGCTGGAC
CCTCTGTGGCGCGGAATTTTACAGAACGAACAGTGGAACCAGCAGCAAAAAACGCTGACCTTCATTCAGCAGATAGAAAG
CGCGCCAGAACGTTTTCGCCAATTACAGGCACATTACGATGACCTGATGTTAGCGGGACTGATTTTGCCGCTGTTTAACT
ATGAATATCAGGTCAATGCCCCATCACGCATCAATGGGGTTACATTAACGGCATATGGTTGGTTCGATTTCTGTCAAGCC
TGGCTACCGCCAATAACGAATTAA

Upstream 100 bases:

>100_bases
AACCTCGTAAAATATGAAACCGGTGGCATGGATAAAATTATGGCGTAGTATTTACGGAACTAATAGTGAACAAATAATTT
AAACTATTCCGGATTTAATT

Downstream 100 bases:

>100_bases
TGGCTACCCTGCAAGTTATAACCTAATAGGTAATTAGCGATAACATTACATAGATGATTAGCTATAACGTTAAGCGGGCA
TAGCGGCATAGCGGCATAGC

Product: ABC transporter periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MRIIHRLTQYERLYQKFGDHPVATTVADVASLLFCSERHARTLIQQLQMKSWLSWHSQVGRGKRAQLQCLKKPDALRAIY
LQQFLEQGDHQAAFSIAQLEPERLQTLLTPHMGGQWQADSPILRIPYYRELEPLNPMNATGRAEQHLIYTLHAGLTRFNT
GDPLPKPDLAHHWQISADGLTWQFFLRSQLRWHNGDHIHGKQLLQTLEILRANRRSQPSFANIVTITLPHALCLQFTLSQ
PDYWLAHRLADLPCRFFHPDDPFLGAGPFKLATFDKHLVRLKQHEFYHLQHPYLDIIEYWITPSLTVNSTNGSCQHPVRI
TIGQEEEFPLARPVQRSMSLGFCYLAINRHRSNLTPQQIAKLLMLVQTSGILEALSISRDVITPCHEILPGWPIPQFSTD
ENPSLPACLVLTYQPPMELESVAEQLKIVLAAHGCTLEIRACHDKQWQDVDKIKESDLLLADHLVGESPEATMESWLRLD
PLWRGILQNEQWNQQQKTLTFIQQIESAPERFRQLQAHYDDLMLAGLILPLFNYEYQVNAPSRINGVTLTAYGWFDFCQA
WLPPITN

Sequences:

>Translated_567_residues
MRIIHRLTQYERLYQKFGDHPVATTVADVASLLFCSERHARTLIQQLQMKSWLSWHSQVGRGKRAQLQCLKKPDALRAIY
LQQFLEQGDHQAAFSIAQLEPERLQTLLTPHMGGQWQADSPILRIPYYRELEPLNPMNATGRAEQHLIYTLHAGLTRFNT
GDPLPKPDLAHHWQISADGLTWQFFLRSQLRWHNGDHIHGKQLLQTLEILRANRRSQPSFANIVTITLPHALCLQFTLSQ
PDYWLAHRLADLPCRFFHPDDPFLGAGPFKLATFDKHLVRLKQHEFYHLQHPYLDIIEYWITPSLTVNSTNGSCQHPVRI
TIGQEEEFPLARPVQRSMSLGFCYLAINRHRSNLTPQQIAKLLMLVQTSGILEALSISRDVITPCHEILPGWPIPQFSTD
ENPSLPACLVLTYQPPMELESVAEQLKIVLAAHGCTLEIRACHDKQWQDVDKIKESDLLLADHLVGESPEATMESWLRLD
PLWRGILQNEQWNQQQKTLTFIQQIESAPERFRQLQAHYDDLMLAGLILPLFNYEYQVNAPSRINGVTLTAYGWFDFCQA
WLPPITN
>Mature_567_residues
MRIIHRLTQYERLYQKFGDHPVATTVADVASLLFCSERHARTLIQQLQMKSWLSWHSQVGRGKRAQLQCLKKPDALRAIY
LQQFLEQGDHQAAFSIAQLEPERLQTLLTPHMGGQWQADSPILRIPYYRELEPLNPMNATGRAEQHLIYTLHAGLTRFNT
GDPLPKPDLAHHWQISADGLTWQFFLRSQLRWHNGDHIHGKQLLQTLEILRANRRSQPSFANIVTITLPHALCLQFTLSQ
PDYWLAHRLADLPCRFFHPDDPFLGAGPFKLATFDKHLVRLKQHEFYHLQHPYLDIIEYWITPSLTVNSTNGSCQHPVRI
TIGQEEEFPLARPVQRSMSLGFCYLAINRHRSNLTPQQIAKLLMLVQTSGILEALSISRDVITPCHEILPGWPIPQFSTD
ENPSLPACLVLTYQPPMELESVAEQLKIVLAAHGCTLEIRACHDKQWQDVDKIKESDLLLADHLVGESPEATMESWLRLD
PLWRGILQNEQWNQQQKTLTFIQQIESAPERFRQLQAHYDDLMLAGLILPLFNYEYQVNAPSRINGVTLTAYGWFDFCQA
WLPPITN

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786650, Length=563, Percent_Identity=46.1811722912966, Blast_Score=520, Evalue=1e-149,
Organism=Escherichia coli, GI1786256, Length=573, Percent_Identity=25.8289703315881, Blast_Score=170, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 65375; Mature: 65375

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIHRLTQYERLYQKFGDHPVATTVADVASLLFCSERHARTLIQQLQMKSWLSWHSQVG
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RGKRAQLQCLKKPDALRAIYLQQFLEQGDHQAAFSIAQLEPERLQTLLTPHMGGQWQADS
CCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCC
PILRIPYYRELEPLNPMNATGRAEQHLIYTLHAGLTRFNTGDPLPKPDLAHHWQISADGL
CEEECCCHHCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCC
TWQFFLRSQLRWHNGDHIHGKQLLQTLEILRANRRSQPSFANIVTITLPHALCLQFTLSQ
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHEEEEEECCHHHHHHEECCC
PDYWLAHRLADLPCRFFHPDDPFLGAGPFKLATFDKHLVRLKQHEFYHLQHPYLDIIEYW
CCHHHHHHHHHCCEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHEECCCCHHHHHHHH
ITPSLTVNSTNGSCQHPVRITIGQEEEFPLARPVQRSMSLGFCYLAINRHRSNLTPQQIA
CCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHH
KLLMLVQTSGILEALSISRDVITPCHEILPGWPIPQFSTDENPSLPACLVLTYQPPMELE
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHH
SVAEQLKIVLAAHGCTLEIRACHDKQWQDVDKIKESDLLLADHLVGESPEATMESWLRLD
HHHHHHHHHHEECCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHH
PLWRGILQNEQWNQQQKTLTFIQQIESAPERFRQLQAHYDDLMLAGLILPLFNYEYQVNA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
PSRINGVTLTAYGWFDFCQAWLPPITN
CCCCCCEEEEEECHHHHHHHHCCCCCC
>Mature Secondary Structure
MRIIHRLTQYERLYQKFGDHPVATTVADVASLLFCSERHARTLIQQLQMKSWLSWHSQVG
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RGKRAQLQCLKKPDALRAIYLQQFLEQGDHQAAFSIAQLEPERLQTLLTPHMGGQWQADS
CCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCC
PILRIPYYRELEPLNPMNATGRAEQHLIYTLHAGLTRFNTGDPLPKPDLAHHWQISADGL
CEEECCCHHCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCC
TWQFFLRSQLRWHNGDHIHGKQLLQTLEILRANRRSQPSFANIVTITLPHALCLQFTLSQ
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHEEEEEECCHHHHHHEECCC
PDYWLAHRLADLPCRFFHPDDPFLGAGPFKLATFDKHLVRLKQHEFYHLQHPYLDIIEYW
CCHHHHHHHHHCCEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHEECCCCHHHHHHHH
ITPSLTVNSTNGSCQHPVRITIGQEEEFPLARPVQRSMSLGFCYLAINRHRSNLTPQQIA
CCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHH
KLLMLVQTSGILEALSISRDVITPCHEILPGWPIPQFSTDENPSLPACLVLTYQPPMELE
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHH
SVAEQLKIVLAAHGCTLEIRACHDKQWQDVDKIKESDLLLADHLVGESPEATMESWLRLD
HHHHHHHHHHEECCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHH
PLWRGILQNEQWNQQQKTLTFIQQIESAPERFRQLQAHYDDLMLAGLILPLFNYEYQVNA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
PSRINGVTLTAYGWFDFCQAWLPPITN
CCCCCCEEEEEECHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]