Click here to switch to the map view.

The map label for this gene is yfbK [C]

Identifier: 153950207

GI number: 153950207

Start: 1527095

End: 1528477

Strand: Reverse

Name: yfbK [C]

Synonym: YpsIP31758_1306

Alternate gene names: 153950207

Gene position: 1528477-1527095 (Counterclockwise)

Preceding gene: 153949894

Following gene: 153950667

Centisome position: 32.36

GC content: 47.58

Gene sequence:

>1383_bases
ATGCTAATAAAACCAGACATCCTGATAAAACCGGCCACGCTAATAAAACAGGCCGCTCGAATAAAGCAGATGACCCTATT
GTTGCTATTATTCCTTTTTTCGCTGTTTGGGGTAGCCAAGGCGGCGACACAAGTGGTCAATGTCAAATCAGAACTTGCTG
CGCCCGTTATGCTGGCTAATAGCGAAGATAAAAATTACCTGAAAATTTCTCTTACTGGTTTTAATCTCGACAGCACCCGT
CGTAGCCCAATCAATCTGGCGCTGGTCATTGATCGTTCTACGTCAATGAGCGGTGAGCGCATCGAGAAAGCCAGAGAAGC
GGCGATTTTAGCGGTTAATATGCTTAACACCACCGATACGCTATCGGTGGTGGCCTACGATAACCACGCCGAGGTGATCA
TTCCGGCCACGAAAGTCACTGATAAGCCAGCGCTGATTGCCAGCATTCAACAGCACATTCACCCAAGGGGAATGACCGCC
TTGTTTGCTGGTGTCAGTATGGGTATTGGTCAAGTGGATAAACACCTGAACCGTGAGCAGGTCAATCGCATCATCCTTAT
CTCTGATGGTCAGGCGAATACTGGCCCCACCTCAATCAGCGAACTTTCCGATCTGGCCCGCATGGCGGCTAAAAAAGGGA
TTGCCATCACCACTATCGGGCTGGGCCAGGATTATAACGAGGATCTGATGACTGCCATTGCGGGTTATAGCGACGGTAAC
CACACCTTTGTCGCTAACTCGGCAGATCTGGAAAAGGCGTTCACCAAAGAATTCCAAGATGTGATGTCCGTCGTCGCACA
GGATATCGTTGTTCAGATTAAGACTGGCGATAAGGTGAAACCGGTACGACTACTGGGGCGCGATGGCGATATCCTCGGCA
ATACAGTGAATGTGAAACTGAATCAGCTTTACTCTAATCAGGAAAAATACATTCTACTGGAGGTGATTCCGGAAAAAGGC
ACTGACAAGCAGCAAAAAGATCTGGCCGATGTCAGTATCAGCTACCTGAATCTCAGCAGTAAAAAACAAGATCAGATTAA
TGAACGAGTGACCGTCAGCTACAGCCAATCCGTAGAAAAGGTCAACGATGCTGTACAAGAAGAAGTATTAGCGGAGTCAG
AGATTCAAAAAACAGCGCTGGCCAATGATGAAGCCATTAAATTGATCGACGCGGGGCGCAAGGATGAAGCGAAGAAAGTG
CTAGAGTCCAATGCCTCAAAACTGGACAGCATGTCGTTCTCCAGCCCGGTTGCAGAGAAAAAAGTGCGAGAGAGTACGAA
TAAACAGCGTAAATTAGCGGATGACATTGACAGTAAAGATGCCGCCACTTACCGTAAAGAGCTGAAAGAACAGAACTACA
ACGTCAAACAGCAGCAGAAGTAA

Upstream 100 bases:

>100_bases
CTTAGCGCATGATAAGATGAATAATCGTGGCACTACTCTTCGAGTCTTGCACAGAGGTACTATCGTGTTACTAAAACCAG
CCATTTTAATAAAAACTGAC

Downstream 100 bases:

>100_bases
AAATAAAAGAGGTTATTGACAAAGTGCCCGCGACGGAGAGAACAGGCAGATCGTAAAGACGCCGTAAATACATCCATGTA
GGCTCGAGCCGCGCCATCCT

Product: von Willebrand factor type A domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MLIKPDILIKPATLIKQAARIKQMTLLLLLFLFSLFGVAKAATQVVNVKSELAAPVMLANSEDKNYLKISLTGFNLDSTR
RSPINLALVIDRSTSMSGERIEKAREAAILAVNMLNTTDTLSVVAYDNHAEVIIPATKVTDKPALIASIQQHIHPRGMTA
LFAGVSMGIGQVDKHLNREQVNRIILISDGQANTGPTSISELSDLARMAAKKGIAITTIGLGQDYNEDLMTAIAGYSDGN
HTFVANSADLEKAFTKEFQDVMSVVAQDIVVQIKTGDKVKPVRLLGRDGDILGNTVNVKLNQLYSNQEKYILLEVIPEKG
TDKQQKDLADVSISYLNLSSKKQDQINERVTVSYSQSVEKVNDAVQEEVLAESEIQKTALANDEAIKLIDAGRKDEAKKV
LESNASKLDSMSFSSPVAEKKVRESTNKQRKLADDIDSKDAATYRKELKEQNYNVKQQQK

Sequences:

>Translated_460_residues
MLIKPDILIKPATLIKQAARIKQMTLLLLLFLFSLFGVAKAATQVVNVKSELAAPVMLANSEDKNYLKISLTGFNLDSTR
RSPINLALVIDRSTSMSGERIEKAREAAILAVNMLNTTDTLSVVAYDNHAEVIIPATKVTDKPALIASIQQHIHPRGMTA
LFAGVSMGIGQVDKHLNREQVNRIILISDGQANTGPTSISELSDLARMAAKKGIAITTIGLGQDYNEDLMTAIAGYSDGN
HTFVANSADLEKAFTKEFQDVMSVVAQDIVVQIKTGDKVKPVRLLGRDGDILGNTVNVKLNQLYSNQEKYILLEVIPEKG
TDKQQKDLADVSISYLNLSSKKQDQINERVTVSYSQSVEKVNDAVQEEVLAESEIQKTALANDEAIKLIDAGRKDEAKKV
LESNASKLDSMSFSSPVAEKKVRESTNKQRKLADDIDSKDAATYRKELKEQNYNVKQQQK
>Mature_460_residues
MLIKPDILIKPATLIKQAARIKQMTLLLLLFLFSLFGVAKAATQVVNVKSELAAPVMLANSEDKNYLKISLTGFNLDSTR
RSPINLALVIDRSTSMSGERIEKAREAAILAVNMLNTTDTLSVVAYDNHAEVIIPATKVTDKPALIASIQQHIHPRGMTA
LFAGVSMGIGQVDKHLNREQVNRIILISDGQANTGPTSISELSDLARMAAKKGIAITTIGLGQDYNEDLMTAIAGYSDGN
HTFVANSADLEKAFTKEFQDVMSVVAQDIVVQIKTGDKVKPVRLLGRDGDILGNTVNVKLNQLYSNQEKYILLEVIPEKG
TDKQQKDLADVSISYLNLSSKKQDQINERVTVSYSQSVEKVNDAVQEEVLAESEIQKTALANDEAIKLIDAGRKDEAKKV
LESNASKLDSMSFSSPVAEKKVRESTNKQRKLADDIDSKDAATYRKELKEQNYNVKQQQK

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

Organism=Escherichia coli, GI1788606, Length=230, Percent_Identity=26.9565217391304, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 50515; Mature: 50515

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKPDILIKPATLIKQAARIKQMTLLLLLFLFSLFGVAKAATQVVNVKSELAAPVMLAN
CCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SEDKNYLKISLTGFNLDSTRRSPINLALVIDRSTSMSGERIEKAREAAILAVNMLNTTDT
CCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHEEEEEEEECCCCE
LSVVAYDNHAEVIIPATKVTDKPALIASIQQHIHPRGMTALFAGVSMGIGQVDKHLNREQ
EEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHCCHHH
VNRIILISDGQANTGPTSISELSDLARMAAKKGIAITTIGLGQDYNEDLMTAIAGYSDGN
CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCC
HTFVANSADLEKAFTKEFQDVMSVVAQDIVVQIKTGDKVKPVRLLGRDGDILGNTVNVKL
EEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCCCCCCCEEEEEE
NQLYSNQEKYILLEVIPEKGTDKQQKDLADVSISYLNLSSKKQDQINERVTVSYSQSVEK
EHHHCCCCCEEEEEEECCCCCCHHHHHHHHHEEEEEECCCCHHHHCCCEEEEEHHHHHHH
VNDAVQEEVLAESEIQKTALANDEAIKLIDAGRKDEAKKVLESNASKLDSMSFSSPVAEK
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCHHHHHCCCCCCCHHHH
KVRESTNKQRKLADDIDSKDAATYRKELKEQNYNVKQQQK
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLIKPDILIKPATLIKQAARIKQMTLLLLLFLFSLFGVAKAATQVVNVKSELAAPVMLAN
CCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SEDKNYLKISLTGFNLDSTRRSPINLALVIDRSTSMSGERIEKAREAAILAVNMLNTTDT
CCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHEEEEEEEECCCCE
LSVVAYDNHAEVIIPATKVTDKPALIASIQQHIHPRGMTALFAGVSMGIGQVDKHLNREQ
EEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHCCHHH
VNRIILISDGQANTGPTSISELSDLARMAAKKGIAITTIGLGQDYNEDLMTAIAGYSDGN
CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCC
HTFVANSADLEKAFTKEFQDVMSVVAQDIVVQIKTGDKVKPVRLLGRDGDILGNTVNVKL
EEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCCCCCCCEEEEEE
NQLYSNQEKYILLEVIPEKGTDKQQKDLADVSISYLNLSSKKQDQINERVTVSYSQSVEK
EHHHCCCCCEEEEEEECCCCCCHHHHHHHHHEEEEEECCCCHHHHCCCEEEEEHHHHHHH
VNDAVQEEVLAESEIQKTALANDEAIKLIDAGRKDEAKKVLESNASKLDSMSFSSPVAEK
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCHHHHHCCCCCCCHHHH
KVRESTNKQRKLADDIDSKDAATYRKELKEQNYNVKQQQK
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]