Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
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Accession | NC_009708 |
Length | 4,723,306 |
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The map label for this gene is cdsA2 [H]
Identifier: 153949765
GI number: 153949765
Start: 3386747
End: 3387676
Strand: Reverse
Name: cdsA2 [H]
Synonym: YpsIP31758_3005
Alternate gene names: 153949765
Gene position: 3387676-3386747 (Counterclockwise)
Preceding gene: 153947147
Following gene: 153950358
Centisome position: 71.72
GC content: 49.35
Gene sequence:
>930_bases ATGCCTGATTCCCTGCAGACGTTGTATTACTGCCTCGGTGGGATTTTCAGCGTTTTATTGCTGGCGACCATTATTATTTT CGTATTAAAAAAATGCCGCCCTCAGCGTGACTGGCTGGAATTACAGCAGCGCATTAATAGCTGGTGGGTGATTATTTGCC TGTTCTCGCTGGCGATGTTGTCGCCAAAATGGCTGGCACTCACTTTCTTTGGTTTCATCAGCTTTCTGTCATTAAAGGAG TATTTGACGCTTGCCCCCACGCGACGTTCAGACAGTGTGCCGTTGTTGTGGATGTATGCTGCCATTCCACTGCAATATAT CTGGGTCGGGATGTCGTGGTACGGAATGTTTATTATCTTCATTCCAATTTATGTCTTTTTATTCCTGCCAGCCCGTATGG TTCTCGTCGGCGATACTAAAGGGTTCTTACATTCAGCGTCCATCATGCATTGGGGCATGATGGCCACGGTATTTGCCTTA AGCCACGTCGCTTATCTGCTGACGTTACCCGGTGTGGATGCTAAAGCAGGGGCGCTGCTGGTTATTTTCCTGGTTGTGGC GACTGAGCTGAACGATATTTCGCAATATCTGTGGGGGAAATCGCTAGGCAAAATCAAAGTCACGCCGAAAGTCAGCCCAA ATAAAACGCTTGCCGGGTTATTGGGTGGCGTGTTGACGACTATGCTGCTGGCGGCCATTTTTGGCCCCTTGTTGACACCG ATGGACTGGCTCCATTCTCTGGGCGCAGGCGTCATTATTGGCCTGAGTGGATTCTGCGGCGATGTGGTGATGTCGGCTAT TAAACGTGATTTTGGCGTTAAAGACTCCGGGAAATTACTGCCAGGGCACGGCGGTATTCTCGACCGTCTGGACTCCCTGA TTTATACCGCGCCGCTGTTCTTCCACTTCTATCACTACTTCTACGTTTAA
Upstream 100 bases:
>100_bases CCGCAGTATATCGGCGTTACCAATATCGTGTTTGGCGTGACGGCATTATTGTTGGTCTGGACCTGTATTAATCGCTGCCG TAGTGCGATAGAGGTGAAAA
Downstream 100 bases:
>100_bases GGCGCGCTGATGAACCGTATGTTGCGCTGGATTTTTACGCTGTGCATCGCTTATCCCGTGGTCTGGATTTGGCTCGGTGT CCGGGTTGCTGGCCGCAAAA
Product: phosphatidate cytidylyltransferase
Products: diphosphate; CDPdiacylglycerol
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPDSLQTLYYCLGGIFSVLLLATIIIFVLKKCRPQRDWLELQQRINSWWVIICLFSLAMLSPKWLALTFFGFISFLSLKE YLTLAPTRRSDSVPLLWMYAAIPLQYIWVGMSWYGMFIIFIPIYVFLFLPARMVLVGDTKGFLHSASIMHWGMMATVFAL SHVAYLLTLPGVDAKAGALLVIFLVVATELNDISQYLWGKSLGKIKVTPKVSPNKTLAGLLGGVLTTMLLAAIFGPLLTP MDWLHSLGAGVIIGLSGFCGDVVMSAIKRDFGVKDSGKLLPGHGGILDRLDSLIYTAPLFFHFYHYFYV
Sequences:
>Translated_309_residues MPDSLQTLYYCLGGIFSVLLLATIIIFVLKKCRPQRDWLELQQRINSWWVIICLFSLAMLSPKWLALTFFGFISFLSLKE YLTLAPTRRSDSVPLLWMYAAIPLQYIWVGMSWYGMFIIFIPIYVFLFLPARMVLVGDTKGFLHSASIMHWGMMATVFAL SHVAYLLTLPGVDAKAGALLVIFLVVATELNDISQYLWGKSLGKIKVTPKVSPNKTLAGLLGGVLTTMLLAAIFGPLLTP MDWLHSLGAGVIIGLSGFCGDVVMSAIKRDFGVKDSGKLLPGHGGILDRLDSLIYTAPLFFHFYHYFYV >Mature_308_residues PDSLQTLYYCLGGIFSVLLLATIIIFVLKKCRPQRDWLELQQRINSWWVIICLFSLAMLSPKWLALTFFGFISFLSLKEY LTLAPTRRSDSVPLLWMYAAIPLQYIWVGMSWYGMFIIFIPIYVFLFLPARMVLVGDTKGFLHSASIMHWGMMATVFALS HVAYLLTLPGVDAKAGALLVIFLVVATELNDISQYLWGKSLGKIKVTPKVSPNKTLAGLLGGVLTTMLLAAIFGPLLTPM DWLHSLGAGVIIGLSGFCGDVVMSAIKRDFGVKDSGKLLPGHGGILDRLDSLIYTAPLFFHFYHYFYV
Specific function: Unknown
COG id: COG4589
COG function: function code R; Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI1787677, Length=295, Percent_Identity=55.9322033898305, Blast_Score=308, Evalue=4e-85, Organism=Escherichia coli, GI87081696, Length=127, Percent_Identity=38.5826771653543, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: 2.7.7.41
Molecular weight: Translated: 34522; Mature: 34391
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSLQTLYYCLGGIFSVLLLATIIIFVLKKCRPQRDWLELQQRINSWWVIICLFSLAML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SPKWLALTFFGFISFLSLKEYLTLAPTRRSDSVPLLWMYAAIPLQYIWVGMSWYGMFIIF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IPIYVFLFLPARMVLVGDTKGFLHSASIMHWGMMATVFALSHVAYLLTLPGVDAKAGALL HHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH VIFLVVATELNDISQYLWGKSLGKIKVTPKVSPNKTLAGLLGGVLTTMLLAAIFGPLLTP HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH MDWLHSLGAGVIIGLSGFCGDVVMSAIKRDFGVKDSGKLLPGHGGILDRLDSLIYTAPLF HHHHHHCCCHHEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH FHFYHYFYV HHHHHHHCC >Mature Secondary Structure PDSLQTLYYCLGGIFSVLLLATIIIFVLKKCRPQRDWLELQQRINSWWVIICLFSLAML CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SPKWLALTFFGFISFLSLKEYLTLAPTRRSDSVPLLWMYAAIPLQYIWVGMSWYGMFIIF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IPIYVFLFLPARMVLVGDTKGFLHSASIMHWGMMATVFALSHVAYLLTLPGVDAKAGALL HHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH VIFLVVATELNDISQYLWGKSLGKIKVTPKVSPNKTLAGLLGGVLTTMLLAAIFGPLLTP HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH MDWLHSLGAGVIIGLSGFCGDVVMSAIKRDFGVKDSGKLLPGHGGILDRLDSLIYTAPLF HHHHHHCCCHHEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH FHFYHYFYV HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CTP; phosphatidate
Specific reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503; 9097039 [H]