Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
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Accession | NC_009708 |
Length | 4,723,306 |
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The map label for this gene is 153948217
Identifier: 153948217
GI number: 153948217
Start: 3361719
End: 3362582
Strand: Direct
Name: 153948217
Synonym: YpsIP31758_2982
Alternate gene names: NA
Gene position: 3361719-3362582 (Clockwise)
Preceding gene: 153947311
Following gene: 153950759
Centisome position: 71.17
GC content: 35.3
Gene sequence:
>864_bases ATGAAGTATGACTCAGTGTTAAAAACTTTTGTTGATGATAATTATCGATTAGAAGATCATCTTGATTTTAAAAAGCAACA TGCAGATATCAGATATCAAAAACTACATAAACAACTCAATGAAATGAGTGATGAAAATATGCATGCATTATTAACAATAG AGGAAGGGGAGTATTTTTTAAAAACATTATGTAATCCCAACCCTCACCAATCGTGGAAGGATGCTATTTTTTCCTGTACC GATCCCACATCGGTTTTTTTTGGCAGTCTCGTTGAGTCATTGTCTGTGAGTAGAATAGTCTTTGAAATAAGGGGGTTTGG TGTAACTGCAACTGAATATGTGGGGAAAAATGGCAGTTCATATATTAAATTATCTGGATATGCTGGAATAAGAAAGTATT TAGATGCAACAAGATACTTAATTGATAACCCAAAAATATTAGATATAGGCATAGGAACTCAAGGTATTGAAAATGGGATC GTTAGAGGCGCAAGATTCTGCATTGTATTTTCTGCTGCTTATCGTTCCGTTGAATTGTTGTTGAAAGATGAATATGGGTT AGCTGATTTTTTTGTTAATTTAACTCTTGATGCTGCAAAACTAGGAGTATCTATTGGGGTTGCTTGGGGGGCAAAGGCGT TAGCTACCGGTTTTATGGTCGCCGGAGGTAGTGTTCTTGCTATTGCTATTGCTATTGGCATTTTTACCATCGGAGTTCTC GCAAGCTTAATTTTATACTGGTTAGATAACGAATATAAAATAAGTGAAACAATAATAAAAAATATAAAATCGCATAGAGT ACAAAATTCACCGTATCATGCTGATCAATTCTTTAACGCTTGGGGGCGACTCAGCCGTGGTTAA
Upstream 100 bases:
>100_bases AGCAGATTTTAGCTTTTTGACAGAAAATTATGGGATTCTGGTGCACAACTCCCTATAATGCGTTGACTTAACTTAAATTA TATACAGGGAGTTAATAATT
Downstream 100 bases:
>100_bases AATAAACAGGCCATTAGTTGGTGCATTTGCAATCTTGCTTTTCTTTCTTTCATCTTGGGGGTGCTGGTTTTCTTTAAGTG GATATTTAGCTTTCTTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKYDSVLKTFVDDNYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFLKTLCNPNPHQSWKDAIFSCT DPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSSYIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGI VRGARFCIVFSAAYRSVELLLKDEYGLADFFVNLTLDAAKLGVSIGVAWGAKALATGFMVAGGSVLAIAIAIGIFTIGVL ASLILYWLDNEYKISETIIKNIKSHRVQNSPYHADQFFNAWGRLSRG
Sequences:
>Translated_287_residues MKYDSVLKTFVDDNYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFLKTLCNPNPHQSWKDAIFSCT DPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSSYIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGI VRGARFCIVFSAAYRSVELLLKDEYGLADFFVNLTLDAAKLGVSIGVAWGAKALATGFMVAGGSVLAIAIAIGIFTIGVL ASLILYWLDNEYKISETIIKNIKSHRVQNSPYHADQFFNAWGRLSRG >Mature_287_residues MKYDSVLKTFVDDNYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFLKTLCNPNPHQSWKDAIFSCT DPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSSYIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGI VRGARFCIVFSAAYRSVELLLKDEYGLADFFVNLTLDAAKLGVSIGVAWGAKALATGFMVAGGSVLAIAIAIGIFTIGVL ASLILYWLDNEYKISETIIKNIKSHRVQNSPYHADQFFNAWGRLSRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32050; Mature: 32050
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYDSVLKTFVDDNYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFL CCHHHHHHHHHCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHH KTLCNPNPHQSWKDAIFSCTDPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSS HHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC YIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGIVRGARFCIVFSAAYRSVELL EEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHEEEHHHHHHHHHHE LKDEYGLADFFVNLTLDAAKLGVSIGVAWGAKALATGFMVAGGSVLAIAIAIGIFTIGVL EECCCCHHHHHHEEEEHHHHHHHHEEHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ASLILYWLDNEYKISETIIKNIKSHRVQNSPYHADQFFNAWGRLSRG HHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MKYDSVLKTFVDDNYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFL CCHHHHHHHHHCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHH KTLCNPNPHQSWKDAIFSCTDPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSS HHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC YIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGIVRGARFCIVFSAAYRSVELL EEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHEEEHHHHHHHHHHE LKDEYGLADFFVNLTLDAAKLGVSIGVAWGAKALATGFMVAGGSVLAIAIAIGIFTIGVL EECCCCHHHHHHEEEEHHHHHHHHEEHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ASLILYWLDNEYKISETIIKNIKSHRVQNSPYHADQFFNAWGRLSRG HHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA