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The map label for this gene is yfeN [H]

Identifier: 153946916

GI number: 153946916

Start: 3488803

End: 3489570

Strand: Direct

Name: yfeN [H]

Synonym: YpsIP31758_3097

Alternate gene names: 153946916

Gene position: 3488803-3489570 (Clockwise)

Preceding gene: 153947355

Following gene: 153950359

Centisome position: 73.86

GC content: 43.36

Gene sequence:

>768_bases
ATGCGTAAAATTCTTATCGGCACTGCAGCGCTGGCAACAGTGACTTTGGCGCCATCCGTCCAAGCTGAATACCAATGGGG
GTTCGGTAATGTCAGCTTGAACTACCTTGACTGGACCAGAAGCACTACGCATAAATCAGGTGATTCCTCGCATAAAGATG
ACTTTGCCTATATTGAGTTAGAAAGCGGGGCAGGCTTCAGTTGGGGGGAAGTTTATGGTTTCTTCGATTTAGAAAACCCC
TTCAATTCAAAAACAGCCCAACCAGGTGATAATCAACGCTATACCTTTAAAACAACTGGCCGCTACTATCTGGGAGACAG
CGGTTTTAACCTTTATGGCCATGTTTACGGTACATACTCTCTGCCAGGGGATAACAGAAACTTCCATGAAGTAAATACAC
TGTATGGGATTGGCTATAACGCTGCTTTCGATGCTCTGTGGCTAAAACCTTTTGTTGCCCTGCACTATGTTGATCAAACT
TACTATTCAGGTAACAACGGCTATGTGGTTGGTTGGGTTGCTGGCTATGACTTCACGGCTTTCGATGAAAAATTCAGCAT
CACTAACTGGAATGAACTGGAATTTAACCGTGCAGAAGCCTATGCAGCAGGCAATGGCGGGAAAAATGGTATCAACGGCG
CTATCGCATTGTGGTGGACACCGGTTAAGCAACTTACTACCGGTATTCAATACCGTTATGCCTATAAAAAATTAGGTGAA
GACTTTTTACAAGATGGTATCGTTTACTCAATTAAATATAATTTCTAA

Upstream 100 bases:

>100_bases
TTTATCCTTTCGTGCTCCGAGACTATGATGAGCGCACTTTTTGCTAAGGACTCACTCCCTTCGCTTTTCCTTAATATTTT
TCATCTACACAGAGGCATTT

Downstream 100 bases:

>100_bases
CTATAACTAAATGATTCCGAGGTGCCTATTTAGGACACCTCGAAATATATTTTAATTTACCTTTACATTACATATTATTC
ACACAAAATAAGTTTGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRKILIGTAALATVTLAPSVQAEYQWGFGNVSLNYLDWTRSTTHKSGDSSHKDDFAYIELESGAGFSWGEVYGFFDLENP
FNSKTAQPGDNQRYTFKTTGRYYLGDSGFNLYGHVYGTYSLPGDNRNFHEVNTLYGIGYNAAFDALWLKPFVALHYVDQT
YYSGNNGYVVGWVAGYDFTAFDEKFSITNWNELEFNRAEAYAAGNGGKNGINGAIALWWTPVKQLTTGIQYRYAYKKLGE
DFLQDGIVYSIKYNF

Sequences:

>Translated_255_residues
MRKILIGTAALATVTLAPSVQAEYQWGFGNVSLNYLDWTRSTTHKSGDSSHKDDFAYIELESGAGFSWGEVYGFFDLENP
FNSKTAQPGDNQRYTFKTTGRYYLGDSGFNLYGHVYGTYSLPGDNRNFHEVNTLYGIGYNAAFDALWLKPFVALHYVDQT
YYSGNNGYVVGWVAGYDFTAFDEKFSITNWNELEFNRAEAYAAGNGGKNGINGAIALWWTPVKQLTTGIQYRYAYKKLGE
DFLQDGIVYSIKYNF
>Mature_255_residues
MRKILIGTAALATVTLAPSVQAEYQWGFGNVSLNYLDWTRSTTHKSGDSSHKDDFAYIELESGAGFSWGEVYGFFDLENP
FNSKTAQPGDNQRYTFKTTGRYYLGDSGFNLYGHVYGTYSLPGDNRNFHEVNTLYGIGYNAAFDALWLKPFVALHYVDQT
YYSGNNGYVVGWVAGYDFTAFDEKFSITNWNELEFNRAEAYAAGNGGKNGINGAIALWWTPVKQLTTGIQYRYAYKKLGE
DFLQDGIVYSIKYNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.parahaemolyticus ompK [H]

Homologues:

Organism=Escherichia coli, GI1788747, Length=255, Percent_Identity=58.0392156862745, Blast_Score=296, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 28775; Mature: 28775

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKILIGTAALATVTLAPSVQAEYQWGFGNVSLNYLDWTRSTTHKSGDSSHKDDFAYIEL
CCEEEEEEEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEE
ESGAGFSWGEVYGFFDLENPFNSKTAQPGDNQRYTFKTTGRYYLGDSGFNLYGHVYGTYS
ECCCCCCHHHEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCEEEEEEEEEEE
LPGDNRNFHEVNTLYGIGYNAAFDALWLKPFVALHYVDQTYYSGNNGYVVGWVAGYDFTA
CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEEEEEHEEEECCCCEEEEEEECCCEEE
FDEKFSITNWNELEFNRAEAYAAGNGGKNGINGAIALWWTPVKQLTTGIQYRYAYKKLGE
CCCEEECCCCCCEECCCCEEEECCCCCCCCCCCEEEEEEECHHHHHCCHHEEHHHHHHHH
DFLQDGIVYSIKYNF
HHHHCCEEEEEEECC
>Mature Secondary Structure
MRKILIGTAALATVTLAPSVQAEYQWGFGNVSLNYLDWTRSTTHKSGDSSHKDDFAYIEL
CCEEEEEEEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEE
ESGAGFSWGEVYGFFDLENPFNSKTAQPGDNQRYTFKTTGRYYLGDSGFNLYGHVYGTYS
ECCCCCCHHHEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCEEEEEEEEEEE
LPGDNRNFHEVNTLYGIGYNAAFDALWLKPFVALHYVDQTYYSGNNGYVVGWVAGYDFTA
CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEEEEEHEEEECCCCEEEEEEECCCEEE
FDEKFSITNWNELEFNRAEAYAAGNGGKNGINGAIALWWTPVKQLTTGIQYRYAYKKLGE
CCCEEECCCCCCEECCCCEEEECCCCCCCCCCCEEEEEEECHHHHHCCHHEEHHHHHHHH
DFLQDGIVYSIKYNF
HHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559336; 9205837; 9278503 [H]