Click here to switch to the map view.

The map label for this gene is 153937872

Identifier: 153937872

GI number: 153937872

Start: 1618965

End: 1619516

Strand: Direct

Name: 153937872

Synonym: CLC_1547

Alternate gene names: NA

Gene position: 1618965-1619516 (Clockwise)

Preceding gene: 153937153

Following gene: 153935696

Centisome position: 43.05

GC content: 25.36

Gene sequence:

>552_bases
ATGGAAAAAGAAAAAATAATATTTTTATCTCATTGTATATTAAATAAAAGTTCAAAAGTGAAATATTATGGAGAAGAAAA
GAATAGAGAAAAAGATGAGAAAATAAGAAAATTTTTAAATTTACTTATGGATAATAATATATCAATTATTCAACTTCCCT
GTCCTGAATTAACTTGCTATGGGATTAAAAGATGGGGACATGTAAAAGATCAATTTGATACCCCACATTTTAGAAAACAT
TGTAGACAGTTATTTTCAATATATTTAGAGCAAATAGAAGAGTATATTAATAATGGTTATGAAATTTTAGGGATTGTAGG
AATAGAAGGAAGTCCAACCTGTGGTGTAAATAAAACATGTGCAGGTAAGTGGGGAGGAGAACTTTCTTCTAATAATTATC
TACAAAGCATTATAGGAACTATAGAAAAGGTAAATGAAAGAGGAATATTTATGGAAGAAATAAAAAAAATATTAGAAAAA
AAACAGTTAAACATTAATGTTATAGGATTAGATGAAACTAATATAGAGAATATATATAAACTCTTTCTGTAG

Upstream 100 bases:

>100_bases
TGATTAGAAAATGCCACTATTATATAATGAAGTTTGATTTAAGATGGAATATTAGTAATTTTTTATACGAAATAGTATAT
ATAGATAAGAAGGAGATATA

Downstream 100 bases:

>100_bases
GGCGGTGCTAAAATGAATTTGAAAATTGAAAACCTTACCATGAAATTCAAAGAGGTCATTGCTGTAAAGGATTTAAATTT
AGATATAGAAGAAGGGACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MEKEKIIFLSHCILNKSSKVKYYGEEKNREKDEKIRKFLNLLMDNNISIIQLPCPELTCYGIKRWGHVKDQFDTPHFRKH
CRQLFSIYLEQIEEYINNGYEILGIVGIEGSPTCGVNKTCAGKWGGELSSNNYLQSIIGTIEKVNERGIFMEEIKKILEK
KQLNINVIGLDETNIENIYKLFL

Sequences:

>Translated_183_residues
MEKEKIIFLSHCILNKSSKVKYYGEEKNREKDEKIRKFLNLLMDNNISIIQLPCPELTCYGIKRWGHVKDQFDTPHFRKH
CRQLFSIYLEQIEEYINNGYEILGIVGIEGSPTCGVNKTCAGKWGGELSSNNYLQSIIGTIEKVNERGIFMEEIKKILEK
KQLNINVIGLDETNIENIYKLFL
>Mature_183_residues
MEKEKIIFLSHCILNKSSKVKYYGEEKNREKDEKIRKFLNLLMDNNISIIQLPCPELTCYGIKRWGHVKDQFDTPHFRKH
CRQLFSIYLEQIEEYINNGYEILGIVGIEGSPTCGVNKTCAGKWGGELSSNNYLQSIIGTIEKVNERGIFMEEIKKILEK
KQLNINVIGLDETNIENIYKLFL

Specific function: Unknown

COG id: COG5418

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007553 [H]

Pfam domain/function: PF04463 DUF523 [H]

EC number: NA

Molecular weight: Translated: 21309; Mature: 21309

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKEKIIFLSHCILNKSSKVKYYGEEKNREKDEKIRKFLNLLMDNNISIIQLPCPELTCY
CCCCCEEEEHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEH
GIKRWGHVKDQFDTPHFRKHCRQLFSIYLEQIEEYINNGYEILGIVGIEGSPTCGVNKTC
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC
AGKWGGELSSNNYLQSIIGTIEKVNERGIFMEEIKKILEKKQLNINVIGLDETNIENIYK
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
LFL
HHC
>Mature Secondary Structure
MEKEKIIFLSHCILNKSSKVKYYGEEKNREKDEKIRKFLNLLMDNNISIIQLPCPELTCY
CCCCCEEEEHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEH
GIKRWGHVKDQFDTPHFRKHCRQLFSIYLEQIEEYINNGYEILGIVGIEGSPTCGVNKTC
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC
AGKWGGELSSNNYLQSIIGTIEKVNERGIFMEEIKKILEKKQLNINVIGLDETNIENIYK
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
LFL
HHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]