| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is acoL [H]
Identifier: 153937778
GI number: 153937778
Start: 1743595
End: 1744986
Strand: Direct
Name: acoL [H]
Synonym: CLC_1660
Alternate gene names: 153937778
Gene position: 1743595-1744986 (Clockwise)
Preceding gene: 153935441
Following gene: 153935051
Centisome position: 46.37
GC content: 32.54
Gene sequence:
>1392_bases ATGAAGCTAGTAGTTATTGGAGGAGGACCAGGAGGATATGTGGCAGCTATTCGTGGAGCGCAATTAGGAGCAGAGGTTAC TCTTATTGAAAAAGAAAAGTTAGGCGGAACTTGTTTAAATATTGGTTGTATACCTACTAAAGTTTTATTACATTCTTCAG AATTATTAAATGAAATAAAAGAAGCTAGAACTTTAGGAATAGAGGTGAATAATGAAGTAAAAATCAATTGGACTCAGCTT CAAAATAGAAAAAATACTGTAGTAAATACATTAGTTTCAGGGGTATCATCATTACTTGAACATAATAAAGTTAAAGTAAT TAATGGAACTGCAGCCTTTGAAGGAAAAAATAGTATAAAAGTAACAAAGGATCAAGGAGAAAGTGGAAATATCCAATTTG ATAATGTGATAATTTCATCTGGCTCCGTTCCATTTATACCTCCTATAGAAGGAAGAGAATTAGAGGGAGTAATTGATAGT ACTGGAGCCTTAAGCTTAGATTCTATTCCTAAAAGTATGGTGATAATTGGTGGAGGCGTTATAGGAATAGAATTTGCAAA TATTTTTAATTCCCTTGGGTGCAAAGTAACAGTTATTGAAATGTTACCATATATATTGCCTCCAGTGGATAGAGAAATTT CTGAGATTCTTAAGGAAAAGCTTAAAAAGGACGGAATTGATATATATAATAACTGTAAGGTAACTAAAATTGAAAATAAC AATGAAAATTTAAATGTAAGTTTTGAAGAAGATAATGACAAGTTAAATATAGAGGCACAAAAAGTTTTAATAGCAGTAGG AAGAAGAGCAAATATAGGGAATTTAAATTTAGAAAGTACTGGAGTATCCACAGAAAAGGGCTGCATTTTGGTAAATGATA ATATGGAAACAAATATAAAGGGAATTTATGCTATAGGTGACTGCACAGGAAAGAATATGCTTGCTCATGTGGCTTCAGAC CAAGGGATAATAGCTGTAGAAAATATTATGGGTAAAAATAAGAAAATGGATTATAAAACTGTACCAGCTTGTGTGTATAC TAAACCAGAGTTAGCTTCTGTAGGATTAACGGAAGAACAAGCAAAACAAAAAGGAGTTGATTACAAAGTAGGAAAGTTCC CTCTAATTTATAATGGCAAATCACTTATAATGAATGATACAGAGGGATTTATAAAAATAATAGCGGATAAAAAATATGAA GAGATATTAGGAGTTCATATACTTGGACCTAGGGCAACGGATTTAATAACAGAGGCAGCCTTAGCTCTAAGACTAGAAGC TACCCTAGAGGAAATAATTACAACAGTACATGCTCATCCAACAATAGGAGAAGCAATGAAGGAGGCAGCTCTTGCAGTAA ACAAAGAAGCAATTCATATGGTGAATAAATAA
Upstream 100 bases:
>100_bases CCATAGGGCGGTAGATGGTGCTGTAGCGGCTCAATTCTTAAAAGCAGTTAAAAAATATATGGAAAAGCCAGAGTTGCTTA TATTGTAGGAGGGATAAAAA
Downstream 100 bases:
>100_bases AATCAAGTTATGGAGGTAAAAATAATGCAGTTTTTAGTAAATAAATCAACAAATCCTTTTTTCAATTTGGCTTTAGAAGA ATATCTTTTAAAAAATGTAG
Product: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase
Products: NA
Alternate protein names: Dihydrolipoamide dehydrogenase [H]
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MKLVVIGGGPGGYVAAIRGAQLGAEVTLIEKEKLGGTCLNIGCIPTKVLLHSSELLNEIKEARTLGIEVNNEVKINWTQL QNRKNTVVNTLVSGVSSLLEHNKVKVINGTAAFEGKNSIKVTKDQGESGNIQFDNVIISSGSVPFIPPIEGRELEGVIDS TGALSLDSIPKSMVIIGGGVIGIEFANIFNSLGCKVTVIEMLPYILPPVDREISEILKEKLKKDGIDIYNNCKVTKIENN NENLNVSFEEDNDKLNIEAQKVLIAVGRRANIGNLNLESTGVSTEKGCILVNDNMETNIKGIYAIGDCTGKNMLAHVASD QGIIAVENIMGKNKKMDYKTVPACVYTKPELASVGLTEEQAKQKGVDYKVGKFPLIYNGKSLIMNDTEGFIKIIADKKYE EILGVHILGPRATDLITEAALALRLEATLEEIITTVHAHPTIGEAMKEAALAVNKEAIHMVNK
Sequences:
>Translated_463_residues MKLVVIGGGPGGYVAAIRGAQLGAEVTLIEKEKLGGTCLNIGCIPTKVLLHSSELLNEIKEARTLGIEVNNEVKINWTQL QNRKNTVVNTLVSGVSSLLEHNKVKVINGTAAFEGKNSIKVTKDQGESGNIQFDNVIISSGSVPFIPPIEGRELEGVIDS TGALSLDSIPKSMVIIGGGVIGIEFANIFNSLGCKVTVIEMLPYILPPVDREISEILKEKLKKDGIDIYNNCKVTKIENN NENLNVSFEEDNDKLNIEAQKVLIAVGRRANIGNLNLESTGVSTEKGCILVNDNMETNIKGIYAIGDCTGKNMLAHVASD QGIIAVENIMGKNKKMDYKTVPACVYTKPELASVGLTEEQAKQKGVDYKVGKFPLIYNGKSLIMNDTEGFIKIIADKKYE EILGVHILGPRATDLITEAALALRLEATLEEIITTVHAHPTIGEAMKEAALAVNKEAIHMVNK >Mature_463_residues MKLVVIGGGPGGYVAAIRGAQLGAEVTLIEKEKLGGTCLNIGCIPTKVLLHSSELLNEIKEARTLGIEVNNEVKINWTQL QNRKNTVVNTLVSGVSSLLEHNKVKVINGTAAFEGKNSIKVTKDQGESGNIQFDNVIISSGSVPFIPPIEGRELEGVIDS TGALSLDSIPKSMVIIGGGVIGIEFANIFNSLGCKVTVIEMLPYILPPVDREISEILKEKLKKDGIDIYNNCKVTKIENN NENLNVSFEEDNDKLNIEAQKVLIAVGRRANIGNLNLESTGVSTEKGCILVNDNMETNIKGIYAIGDCTGKNMLAHVASD QGIIAVENIMGKNKKMDYKTVPACVYTKPELASVGLTEEQAKQKGVDYKVGKFPLIYNGKSLIMNDTEGFIKIIADKKYE EILGVHILGPRATDLITEAALALRLEATLEEIITTVHAHPTIGEAMKEAALAVNKEAIHMVNK
Specific function: Has chromate reductase activity [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=462, Percent_Identity=42.8571428571429, Blast_Score=342, Evalue=3e-94, Organism=Homo sapiens, GI50301238, Length=451, Percent_Identity=29.2682926829268, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI22035672, Length=456, Percent_Identity=28.9473684210526, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI33519430, Length=464, Percent_Identity=29.3103448275862, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI33519428, Length=464, Percent_Identity=29.3103448275862, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI33519426, Length=464, Percent_Identity=29.3103448275862, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI148277065, Length=464, Percent_Identity=29.3103448275862, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI148277071, Length=464, Percent_Identity=29.3103448275862, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI291045266, Length=430, Percent_Identity=29.0697674418605, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI291045268, Length=426, Percent_Identity=26.7605633802817, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI1786307, Length=456, Percent_Identity=37.5, Blast_Score=311, Evalue=7e-86, Organism=Escherichia coli, GI87081717, Length=454, Percent_Identity=32.15859030837, Blast_Score=219, Evalue=3e-58, Organism=Escherichia coli, GI87082354, Length=454, Percent_Identity=29.5154185022026, Blast_Score=201, Evalue=7e-53, Organism=Escherichia coli, GI1789915, Length=439, Percent_Identity=31.2072892938497, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI1789065, Length=244, Percent_Identity=25.8196721311475, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI32565766, Length=458, Percent_Identity=41.9213973799127, Blast_Score=342, Evalue=2e-94, Organism=Caenorhabditis elegans, GI17557007, Length=469, Percent_Identity=30.2771855010661, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI71983429, Length=439, Percent_Identity=28.0182232346241, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI71983419, Length=439, Percent_Identity=28.0182232346241, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71982272, Length=434, Percent_Identity=28.110599078341, Blast_Score=138, Evalue=6e-33, Organism=Saccharomyces cerevisiae, GI6321091, Length=472, Percent_Identity=43.2203389830509, Blast_Score=353, Evalue=3e-98, Organism=Saccharomyces cerevisiae, GI6325166, Length=447, Percent_Identity=27.2930648769575, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6325240, Length=463, Percent_Identity=27.645788336933, Blast_Score=170, Evalue=5e-43, Organism=Drosophila melanogaster, GI21358499, Length=459, Percent_Identity=42.2657952069717, Blast_Score=343, Evalue=1e-94, Organism=Drosophila melanogaster, GI24640553, Length=478, Percent_Identity=31.7991631799163, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24640549, Length=478, Percent_Identity=31.7991631799163, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24640551, Length=478, Percent_Identity=31.7991631799163, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI17737741, Length=481, Percent_Identity=29.3139293139293, Blast_Score=165, Evalue=5e-41,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR006258 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.4 [H]
Molecular weight: Translated: 49969; Mature: 49969
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVVIGGGPGGYVAAIRGAQLGAEVTLIEKEKLGGTCLNIGCIPTKVLLHSSELLNEIK CEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHH EARTLGIEVNNEVKINWTQLQNRKNTVVNTLVSGVSSLLEHNKVKVINGTAAFEGKNSIK HHHEEEEEECCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEE VTKDQGESGNIQFDNVIISSGSVPFIPPIEGRELEGVIDSTGALSLDSIPKSMVIIGGGV EEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCEECCCCCCEEEEEECCE IGIEFANIFNSLGCKVTVIEMLPYILPPVDREISEILKEKLKKDGIDIYNNCKVTKIENN EEEEHHHHHHHCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCEEEEEEECC NENLNVSFEEDNDKLNIEAQKVLIAVGRRANIGNLNLESTGVSTEKGCILVNDNMETNIK CCEEEEEEECCCCEEEEEHEEEEEEECCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCE GIYAIGDCTGKNMLAHVASDQGIIAVENIMGKNKKMDYKTVPACVYTKPELASVGLTEEQ EEEEEECCCCCCCEEEECCCCCEEEEHHHCCCCCCCCCCCCCEEEECCCCHHCCCCCHHH AKQKGVDYKVGKFPLIYNGKSLIMNDTEGFIKIIADKKYEEILGVHILGPRATDLITEAA HHHCCCCEECCCEEEEECCCEEEEECCCCEEEEEECCCHHHHEEEEEECCCHHHHHHHHH LALRLEATLEEIITTVHAHPTIGEAMKEAALAVNKEAIHMVNK HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCCC >Mature Secondary Structure MKLVVIGGGPGGYVAAIRGAQLGAEVTLIEKEKLGGTCLNIGCIPTKVLLHSSELLNEIK CEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHH EARTLGIEVNNEVKINWTQLQNRKNTVVNTLVSGVSSLLEHNKVKVINGTAAFEGKNSIK HHHEEEEEECCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEE VTKDQGESGNIQFDNVIISSGSVPFIPPIEGRELEGVIDSTGALSLDSIPKSMVIIGGGV EEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCEECCCCCCEEEEEECCE IGIEFANIFNSLGCKVTVIEMLPYILPPVDREISEILKEKLKKDGIDIYNNCKVTKIENN EEEEHHHHHHHCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCEEEEEEECC NENLNVSFEEDNDKLNIEAQKVLIAVGRRANIGNLNLESTGVSTEKGCILVNDNMETNIK CCEEEEEEECCCCEEEEEHEEEEEEECCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCE GIYAIGDCTGKNMLAHVASDQGIIAVENIMGKNKKMDYKTVPACVYTKPELASVGLTEEQ EEEEEECCCCCCCEEEECCCCCEEEEHHHCCCCCCCCCCCCCEEEECCCCHHCCCCCHHH AKQKGVDYKVGKFPLIYNGKSLIMNDTEGFIKIIADKKYEEILGVHILGPRATDLITEAA HHHCCCCEECCCEEEEECCCEEEEECCCCEEEEEECCCHHHHEEEEEECCCHHHHHHHHH LALRLEATLEEIITTVHAHPTIGEAMKEAALAVNKEAIHMVNK HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA