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The map label for this gene is gidA-1

Identifier: 153937359

GI number: 153937359

Start: 2367171

End: 2368448

Strand: Direct

Name: gidA-1

Synonym: CLC_2241

Alternate gene names: NA

Gene position: 2367171-2368448 (Clockwise)

Preceding gene: 153934897

Following gene: 153935036

Centisome position: 62.95

GC content: 34.51

Gene sequence:

>1278_bases
ATGAAGGTTGTAGTTATCGGCGGCGGTTGGGCCGGATGTGCAGCAGCTATAAGCGCTAAAAAAGCTGGTGCTGATGTTAG
TATATTTGAAAAGACCGATTTGCTTTTGGGATTAGGTAATGTTGGCGGAATAATGAGAAACAACGGAAGATTCACCGCAG
CAGAGGAACTTATAGCTTTAGGTGCTGGTGATTTAATAAATATAACAGATGAAAACAGTAGACATAAAAACATAGATTTT
CCTGGTCATAAACACGCATGGCTTTATGATGTAAATAAAATAGAACCTGCTGTAAAAAATCATATGAAAAATATGGGCAT
AGATATTCATCTTATCTCTAGAATAGTAGATGTAAAAAAAGAAGGAGATAAAATAAAAGGCATATATATTTCAGACGGAA
CTTACGTAGATGGTGATGTATTTATAGAAACTACTGGTTCTACAGGACCTATGGGCAATTGTTTAAGATATGGTAATGGA
TGTTCTATGTGTATTCTAAGATGTCCTGCCTTTGGCCCTAGGGTAAGCTTAACTTCAAGAGCTGGAGTAGATGATTTCCA
AGGAGAAAGAGAAGATGATTTACTAGGAGCCTTTAGTGGTTCCTGTAAACTAGCTAAAGAAACTATGTCTGATGAATTGG
TAAAAGAACTTGATGAAACTGGAGTATTGGTTCTAAAGGTTCCAAAGGAAGATATAAATCTAGATAAATTAAAAATGAAG
GTTTGTCAACAATATGCTCTAAAAGAATTTGCAGAAAATATCGTAATACTAGACACTGGCCATGCAAAATTAATGACTTC
CTATTATCCTCTAGAAAAACTAAGAAAACTAAAGGGATTGGAAAAGGTAAAATATATAGATCCTTATGCAGGTGGAAAAG
GTAATTCTATAAGATATTTATCTGTAGCTCCAAGAACAGATGATATGAAAGTAAAAGGCCTAGAAAATCTTTTTGTTGGT
GGAGAAAAATCAGGGCTGTTTGTAGGTCACACTGAAGCCATGACCACAGGAAGTTTAGCTGGGCACAACGCTGTAAGATA
TTGTTTAGGTATGCCAATGTTAATTCTCCCAAGAAGTATGGCTTTAGGAGATTTAATAGCCTACGCAAATCATAAGCTTT
ATTCAAAGGAAGGTAGAAAAAATAGATATACCTTTGCCGGTGCAGAATATTTTAAGAGAATGGTTGAAGAAAACTTGTAT
ACTACAGATAAAGAAGAGATAAATAAAAGAATTTCAAAATTAAACTTGGAAAATGCTTTAGCTCAAAGATTAGTATAA

Upstream 100 bases:

>100_bases
ATGAGGATAAATTAGGAGGGTTACAACGGTCAAAAAATTATATAAATAATTATAAAACATGTTTAATTAAGACCTATATA
AATTTGGGGGTGGATTTTTA

Downstream 100 bases:

>100_bases
AAATTTAGGAGCCAAGATTATGGCTCCTTTTAAAATTTTTATACTAAATATTATACATTTATTTCTGCTTTTTCTCCTAG
CATTGCTTTGTTTTGTTCTA

Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Products: NA

Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; tRNA Uridine 5-Carboxymethylaminomethyl GidA; Glucose Inhibited Division Protein A; 4-Cys Ferredoxin; FAD Dependent Oxidoreductase; Fragment Flavodoxin Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKVVVIGGGWAGCAAAISAKKAGADVSIFEKTDLLLGLGNVGGIMRNNGRFTAAEELIALGAGDLINITDENSRHKNIDF
PGHKHAWLYDVNKIEPAVKNHMKNMGIDIHLISRIVDVKKEGDKIKGIYISDGTYVDGDVFIETTGSTGPMGNCLRYGNG
CSMCILRCPAFGPRVSLTSRAGVDDFQGEREDDLLGAFSGSCKLAKETMSDELVKELDETGVLVLKVPKEDINLDKLKMK
VCQQYALKEFAENIVILDTGHAKLMTSYYPLEKLRKLKGLEKVKYIDPYAGGKGNSIRYLSVAPRTDDMKVKGLENLFVG
GEKSGLFVGHTEAMTTGSLAGHNAVRYCLGMPMLILPRSMALGDLIAYANHKLYSKEGRKNRYTFAGAEYFKRMVEENLY
TTDKEEINKRISKLNLENALAQRLV

Sequences:

>Translated_425_residues
MKVVVIGGGWAGCAAAISAKKAGADVSIFEKTDLLLGLGNVGGIMRNNGRFTAAEELIALGAGDLINITDENSRHKNIDF
PGHKHAWLYDVNKIEPAVKNHMKNMGIDIHLISRIVDVKKEGDKIKGIYISDGTYVDGDVFIETTGSTGPMGNCLRYGNG
CSMCILRCPAFGPRVSLTSRAGVDDFQGEREDDLLGAFSGSCKLAKETMSDELVKELDETGVLVLKVPKEDINLDKLKMK
VCQQYALKEFAENIVILDTGHAKLMTSYYPLEKLRKLKGLEKVKYIDPYAGGKGNSIRYLSVAPRTDDMKVKGLENLFVG
GEKSGLFVGHTEAMTTGSLAGHNAVRYCLGMPMLILPRSMALGDLIAYANHKLYSKEGRKNRYTFAGAEYFKRMVEENLY
TTDKEEINKRISKLNLENALAQRLV
>Mature_425_residues
MKVVVIGGGWAGCAAAISAKKAGADVSIFEKTDLLLGLGNVGGIMRNNGRFTAAEELIALGAGDLINITDENSRHKNIDF
PGHKHAWLYDVNKIEPAVKNHMKNMGIDIHLISRIVDVKKEGDKIKGIYISDGTYVDGDVFIETTGSTGPMGNCLRYGNG
CSMCILRCPAFGPRVSLTSRAGVDDFQGEREDDLLGAFSGSCKLAKETMSDELVKELDETGVLVLKVPKEDINLDKLKMK
VCQQYALKEFAENIVILDTGHAKLMTSYYPLEKLRKLKGLEKVKYIDPYAGGKGNSIRYLSVAPRTDDMKVKGLENLFVG
GEKSGLFVGHTEAMTTGSLAGHNAVRYCLGMPMLILPRSMALGDLIAYANHKLYSKEGRKNRYTFAGAEYFKRMVEENLY
TTDKEEINKRISKLNLENALAQRLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46676; Mature: 46676

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVVIGGGWAGCAAAISAKKAGADVSIFEKTDLLLGLGNVGGIMRNNGRFTAAEELIAL
CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCEEECCCCEEHHHHHHHH
GAGDLINITDENSRHKNIDFPGHKHAWLYDVNKIEPAVKNHMKNMGIDIHLISRIVDVKK
CCCCEEEECCCCCCCCCCCCCCCCCEEEEECHHCCHHHHHHHHHCCCHHHHHHHHHHHHC
EGDKIKGIYISDGTYVDGDVFIETTGSTGPMGNCLRYGNGCSMCILRCPAFGPRVSLTSR
CCCEEEEEEEECCEEECCEEEEEECCCCCCCCCHHHCCCCCCEEEEECCCCCCCEEECCC
AGVDDFQGEREDDLLGAFSGSCKLAKETMSDELVKELDETGVLVLKVPKEDINLDKLKMK
CCCCHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHH
VCQQYALKEFAENIVILDTGHAKLMTSYYPLEKLRKLKGLEKVKYIDPYAGGKGNSIRYL
HHHHHHHHHHHCCEEEEECCCHHHHHHHCCHHHHHHHHCHHHEEEECCCCCCCCCEEEEE
SVAPRTDDMKVKGLENLFVGGEKSGLFVGHTEAMTTGSLAGHNAVRYCLGMPMLILPRSM
EECCCCCCCEECCCHHHEECCCCCCEEEECCHHHCCCCCCCHHHHHHHHCCCHHHHCCHH
ALGDLIAYANHKLYSKEGRKNRYTFAGAEYFKRMVEENLYTTDKEEINKRISKLNLENAL
HHHHHHHHHCCCEECCCCCCCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHH
AQRLV
HHHCC
>Mature Secondary Structure
MKVVVIGGGWAGCAAAISAKKAGADVSIFEKTDLLLGLGNVGGIMRNNGRFTAAEELIAL
CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCEEECCCCEEHHHHHHHH
GAGDLINITDENSRHKNIDFPGHKHAWLYDVNKIEPAVKNHMKNMGIDIHLISRIVDVKK
CCCCEEEECCCCCCCCCCCCCCCCCEEEEECHHCCHHHHHHHHHCCCHHHHHHHHHHHHC
EGDKIKGIYISDGTYVDGDVFIETTGSTGPMGNCLRYGNGCSMCILRCPAFGPRVSLTSR
CCCEEEEEEEECCEEECCEEEEEECCCCCCCCCHHHCCCCCCEEEEECCCCCCCEEECCC
AGVDDFQGEREDDLLGAFSGSCKLAKETMSDELVKELDETGVLVLKVPKEDINLDKLKMK
CCCCHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHH
VCQQYALKEFAENIVILDTGHAKLMTSYYPLEKLRKLKGLEKVKYIDPYAGGKGNSIRYL
HHHHHHHHHHHCCEEEEECCCHHHHHHHCCHHHHHHHHCHHHEEEECCCCCCCCCEEEEE
SVAPRTDDMKVKGLENLFVGGEKSGLFVGHTEAMTTGSLAGHNAVRYCLGMPMLILPRSM
EECCCCCCCEECCCHHHEECCCCCCEEEECCHHHCCCCCCCHHHHHHHHCCCHHHHCCHH
ALGDLIAYANHKLYSKEGRKNRYTFAGAEYFKRMVEENLYTTDKEEINKRISKLNLENAL
HHHHHHHHHCCCEECCCCCCCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHH
AQRLV
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA