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The map label for this gene is yajR [H]

Identifier: 153937152

GI number: 153937152

Start: 1798606

End: 1799790

Strand: Direct

Name: yajR [H]

Synonym: CLC_1704

Alternate gene names: 153937152

Gene position: 1798606-1799790 (Clockwise)

Preceding gene: 153935587

Following gene: 153937565

Centisome position: 47.83

GC content: 28.61

Gene sequence:

>1185_bases
ATGAAAAAGAATGTGTTTTCAAAAAAAGAATTAATGTTTATATGTACACTAGGGTTTGCCTTAGGTATAAGGCAGATGGC
GATGACTATGGTTATGCCCTTTATATCTGTTTATAGCAAAACTTTGGCTTATAGTACTCCAGTATTAGCTGGTGTAGCAT
TAGGTATATTTGGTCTTATGCAAGCTTTTTTTCAGATACCTTTTGGTGTTTTTAGTGATAAATTTGGGAATAAAAAAGTT
ATTTTAATAGGGCTTATGCAAGTAATTATAGGACTATTGTTGGCTTATTTTGCAAAAAATATTTATTTATTAATAGTTGC
TAGAGCCCTGCAGGGAAGTGGTGCTATAATTGCAGTAGGATATTCTTGGATTTCTAGCAGTGTACATTGTGAGAAACGAA
CAAGAGCTATAAGTATAGTTGGGATTATATTGGGTTTTGCAGCTACAGCTTCCTTTGCTTTAGGACCTATAATACATAAG
TATGTATCTGTAAATAATATGTTCTTATATTGTGCTTTGCTAATATTATTTAGTTGGATTATAATATTAGTATTTTTAAA
AGAAGAAAAATCTCATCATAAAAGTGAAACTAATTCTAAAGAAGAATATTCTAAAAATAATATTAATATTAGGGAAGTTT
TTCATATATTATTAGACAATGATATATTTGTAAAATTAAATATAGCAGCTTTTTTAAATAATTTTATAATGGCAGCAGTA
TTTTTTGCTTTACCACAGTATTTAGAAAATATTACAGGTATTGATGGTATGTGGAAAATATTTATGCCTTCAGTTCTTAT
AGCTATAGCTTTTATGACATGGGTTGTAAGAGTTTCAGAAAAGGGTTATGGAATAAAGCTATTAATTATATCCTTTGCTA
TTACTGCTATAGGTGTGATTTTTTATTTTAACAAAAGTTCATTTACATTTATATTAGTAGGAACTATATTATTTATGACA
GGATATATATGTATATGTACATTAGTACCATCCCTCGCCAATGAAATAGCAGAGGAAAGCTATAGGGGTACAGCCAATGG
TATAGTTAATAGTTTTCAATATATAGGGTCTTTTGTGGGCTCAGTTATTATGGCAGCTCTATGGGTAAATTATGAAAAAA
TAGCATTGATTTTACTCATAATAGTTTGTATTCTAGGGATAATTATGCTTAAACATTGTAATTAA

Upstream 100 bases:

>100_bases
ATTATTCTTGACAATTATAGAATGGAAGTATTAAGCTTATGTTAGAAACTTAAAAAACTAATTTGGTTTCCTTAGTGAAT
TTTAATGTAAGAGGTGTATT

Downstream 100 bases:

>100_bases
AGAAATGCTATTGCTTTTAGATATTATAGCATAAAATGAAAAATTTTATTAATAGATGTATAATATAAAGAAAAAATACT
TAATTAAAAACCTTTAGTAT

Product: major facilitator family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKKNVFSKKELMFICTLGFALGIRQMAMTMVMPFISVYSKTLAYSTPVLAGVALGIFGLMQAFFQIPFGVFSDKFGNKKV
ILIGLMQVIIGLLLAYFAKNIYLLIVARALQGSGAIIAVGYSWISSSVHCEKRTRAISIVGIILGFAATASFALGPIIHK
YVSVNNMFLYCALLILFSWIIILVFLKEEKSHHKSETNSKEEYSKNNINIREVFHILLDNDIFVKLNIAAFLNNFIMAAV
FFALPQYLENITGIDGMWKIFMPSVLIAIAFMTWVVRVSEKGYGIKLLIISFAITAIGVIFYFNKSSFTFILVGTILFMT
GYICICTLVPSLANEIAEESYRGTANGIVNSFQYIGSFVGSVIMAALWVNYEKIALILLIIVCILGIIMLKHCN

Sequences:

>Translated_394_residues
MKKNVFSKKELMFICTLGFALGIRQMAMTMVMPFISVYSKTLAYSTPVLAGVALGIFGLMQAFFQIPFGVFSDKFGNKKV
ILIGLMQVIIGLLLAYFAKNIYLLIVARALQGSGAIIAVGYSWISSSVHCEKRTRAISIVGIILGFAATASFALGPIIHK
YVSVNNMFLYCALLILFSWIIILVFLKEEKSHHKSETNSKEEYSKNNINIREVFHILLDNDIFVKLNIAAFLNNFIMAAV
FFALPQYLENITGIDGMWKIFMPSVLIAIAFMTWVVRVSEKGYGIKLLIISFAITAIGVIFYFNKSSFTFILVGTILFMT
GYICICTLVPSLANEIAEESYRGTANGIVNSFQYIGSFVGSVIMAALWVNYEKIALILLIIVCILGIIMLKHCN
>Mature_394_residues
MKKNVFSKKELMFICTLGFALGIRQMAMTMVMPFISVYSKTLAYSTPVLAGVALGIFGLMQAFFQIPFGVFSDKFGNKKV
ILIGLMQVIIGLLLAYFAKNIYLLIVARALQGSGAIIAVGYSWISSSVHCEKRTRAISIVGIILGFAATASFALGPIIHK
YVSVNNMFLYCALLILFSWIIILVFLKEEKSHHKSETNSKEEYSKNNINIREVFHILLDNDIFVKLNIAAFLNNFIMAAV
FFALPQYLENITGIDGMWKIFMPSVLIAIAFMTWVVRVSEKGYGIKLLIISFAITAIGVIFYFNKSSFTFILVGTILFMT
GYICICTLVPSLANEIAEESYRGTANGIVNSFQYIGSFVGSVIMAALWVNYEKIALILLIIVCILGIIMLKHCN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=358, Percent_Identity=27.9329608938547, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43823; Mature: 43823

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNVFSKKELMFICTLGFALGIRQMAMTMVMPFISVYSKTLAYSTPVLAGVALGIFGLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
QAFFQIPFGVFSDKFGNKKVILIGLMQVIIGLLLAYFAKNIYLLIVARALQGSGAIIAVG
HHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
YSWISSSVHCEKRTRAISIVGIILGFAATASFALGPIIHKYVSVNNMFLYCALLILFSWI
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IILVFLKEEKSHHKSETNSKEEYSKNNINIREVFHILLDNDIFVKLNIAAFLNNFIMAAV
HHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHH
FFALPQYLENITGIDGMWKIFMPSVLIAIAFMTWVVRVSEKGYGIKLLIISFAITAIGVI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FYFNKSSFTFILVGTILFMTGYICICTLVPSLANEIAEESYRGTANGIVNSFQYIGSFVG
HEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SVIMAALWVNYEKIALILLIIVCILGIIMLKHCN
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKNVFSKKELMFICTLGFALGIRQMAMTMVMPFISVYSKTLAYSTPVLAGVALGIFGLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
QAFFQIPFGVFSDKFGNKKVILIGLMQVIIGLLLAYFAKNIYLLIVARALQGSGAIIAVG
HHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
YSWISSSVHCEKRTRAISIVGIILGFAATASFALGPIIHKYVSVNNMFLYCALLILFSWI
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IILVFLKEEKSHHKSETNSKEEYSKNNINIREVFHILLDNDIFVKLNIAAFLNNFIMAAV
HHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHH
FFALPQYLENITGIDGMWKIFMPSVLIAIAFMTWVVRVSEKGYGIKLLIISFAITAIGVI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FYFNKSSFTFILVGTILFMTGYICICTLVPSLANEIAEESYRGTANGIVNSFQYIGSFVG
HEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SVIMAALWVNYEKIALILLIIVCILGIIMLKHCN
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]