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The map label for this gene is 153936655

Identifier: 153936655

GI number: 153936655

Start: 1878634

End: 1878876

Strand: Direct

Name: 153936655

Synonym: CLC_1771

Alternate gene names: NA

Gene position: 1878634-1878876 (Clockwise)

Preceding gene: 153937823

Following gene: 153936361

Centisome position: 49.96

GC content: 25.93

Gene sequence:

>243_bases
ATGTTAATAATAAATATTTGTGTGGGAAGTGCCTGTCATTTAAAAGGTTCTTATAAAGTTATAACTTTACTCCAAAATTT
TATAGGGAAAAACAATTTAAAAGATAAAGTAGAAATAAAGGGTTCTTTTTGTTTAGGTTATTGTACTGAGGGTGTTTCTG
TGAAAATTCAAGATAAAATTTATTCTGTAAATGAAGAAAATGTAGAAGAGTTTTTTAATAATGTGGTATTGAGGGGTATA
TAG

Upstream 100 bases:

>100_bases
ATTATAATATTTTATTAATTAGATTACTATATTATTTTTTATTTTTTTATTGTAAAATTATTATAAATATACAGACAATT
TATAGAGGGTGGTTATTTTT

Downstream 100 bases:

>100_bases
TAATGAATTATATAGATATATCTGGTTTAAACTGCAAAAATTGTTATAAATGTTTAAGGGCTTGCCCAGTAAAAGCTATT
AAATTTAAAAATGAAAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MLIINICVGSACHLKGSYKVITLLQNFIGKNNLKDKVEIKGSFCLGYCTEGVSVKIQDKIYSVNEENVEEFFNNVVLRGI

Sequences:

>Translated_80_residues
MLIINICVGSACHLKGSYKVITLLQNFIGKNNLKDKVEIKGSFCLGYCTEGVSVKIQDKIYSVNEENVEEFFNNVVLRGI
>Mature_80_residues
MLIINICVGSACHLKGSYKVITLLQNFIGKNNLKDKVEIKGSFCLGYCTEGVSVKIQDKIYSVNEENVEEFFNNVVLRGI

Specific function: Might be part of a multi-protein complex, possibly involved in metal cluster assembly [H]

COG id: COG1905

COG function: function code C; NADH:ubiquinone oxidoreductase 24 kD subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 8944; Mature: 8944

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIINICVGSACHLKGSYKVITLLQNFIGKNNLKDKVEIKGSFCLGYCTEGVSVKIQDKI
CEEEEEECCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCEEEEECCE
YSVNEENVEEFFNNVVLRGI
EECCHHHHHHHHHHEEECCC
>Mature Secondary Structure
MLIINICVGSACHLKGSYKVITLLQNFIGKNNLKDKVEIKGSFCLGYCTEGVSVKIQDKI
CEEEEEECCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCEEEEECCE
YSVNEENVEEFFNNVVLRGI
EECCHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]