Click here to switch to the map view.

The map label for this gene is 153936539

Identifier: 153936539

GI number: 153936539

Start: 1458589

End: 1459080

Strand: Reverse

Name: 153936539

Synonym: CLC_1400

Alternate gene names: NA

Gene position: 1459080-1458589 (Counterclockwise)

Preceding gene: 153935322

Following gene: 153936019

Centisome position: 38.8

GC content: 27.85

Gene sequence:

>492_bases
ATGAAAAAATATAGCGATATTAAATTAAAAAATTTAAAGTCTAAAATAATATCCGGTGTTATGTGGTTAGAAACTTTGTT
AGCCATTTTTATGATAGCTTCTGTATTACTAAGCTCTAAAGACCTTATAAGCTTTATCGTACAAATTTTTACCCTAGATG
CAATTCCATCCTACGATATGTTTCAAAAATTTCTATCTCATCTTTTATTGTTAGTAATAGCCTTAGAATTGGCCTTAATG
CTAGTAAAGCATACACCAAATAGTGTAGTTGAAGTAATGCTCTATGCTATAGCTAGAAAAATGTTAGTTTACGGTTCCTC
TGCTCTTGAAATATTTTTAGGGGTTTTGTCTTTAGCCGGAATATTCTTTATAAAAAAATACTTATTCTCAGAACGAGATA
AAAAGTTAGAAGAAAAAGAATCCTTTGTACAAGAATTATCCGTTGATATCATTAAAAAAACTAATGTAATATCAAATAAA
ACTACAGAATAA

Upstream 100 bases:

>100_bases
TATAAGGTATTTATAACCACTTTACTTACTTATTTTTTTATTAATTTTTTAAGTTATTAAAAAATTTAATTATTAAATTG
TTAAGGATGTTGATATAATA

Downstream 100 bases:

>100_bases
ATTAAGAAGTCTTTCTTATTAAATCATCTTATCCTTACATCTAATAAGGATCTTAAGATAATATCATAAGAAAGACTTTT
ATATTAAATTACAGATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKKYSDIKLKNLKSKIISGVMWLETLLAIFMIASVLLSSKDLISFIVQIFTLDAIPSYDMFQKFLSHLLLLVIALELALM
LVKHTPNSVVEVMLYAIARKMLVYGSSALEIFLGVLSLAGIFFIKKYLFSERDKKLEEKESFVQELSVDIIKKTNVISNK
TTE

Sequences:

>Translated_163_residues
MKKYSDIKLKNLKSKIISGVMWLETLLAIFMIASVLLSSKDLISFIVQIFTLDAIPSYDMFQKFLSHLLLLVIALELALM
LVKHTPNSVVEVMLYAIARKMLVYGSSALEIFLGVLSLAGIFFIKKYLFSERDKKLEEKESFVQELSVDIIKKTNVISNK
TTE
>Mature_163_residues
MKKYSDIKLKNLKSKIISGVMWLETLLAIFMIASVLLSSKDLISFIVQIFTLDAIPSYDMFQKFLSHLLLLVIALELALM
LVKHTPNSVVEVMLYAIARKMLVYGSSALEIFLGVLSLAGIFFIKKYLFSERDKKLEEKESFVQELSVDIIKKTNVISNK
TTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18544; Mature: 18544

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYSDIKLKNLKSKIISGVMWLETLLAIFMIASVLLSSKDLISFIVQIFTLDAIPSYDM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH
FQKFLSHLLLLVIALELALMLVKHTPNSVVEVMLYAIARKMLVYGSSALEIFLGVLSLAG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
IFFIKKYLFSERDKKLEEKESFVQELSVDIIKKTNVISNKTTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKYSDIKLKNLKSKIISGVMWLETLLAIFMIASVLLSSKDLISFIVQIFTLDAIPSYDM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH
FQKFLSHLLLLVIALELALMLVKHTPNSVVEVMLYAIARKMLVYGSSALEIFLGVLSLAG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
IFFIKKYLFSERDKKLEEKESFVQELSVDIIKKTNVISNKTTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA