Definition Clostridium botulinum A str. Hall, complete genome.
Accession NC_009698
Length 3,760,560

Click here to switch to the map view.

The map label for this gene is 153936413

Identifier: 153936413

GI number: 153936413

Start: 1362665

End: 1362835

Strand: Reverse

Name: 153936413

Synonym: CLC_1319

Alternate gene names: NA

Gene position: 1362835-1362665 (Counterclockwise)

Preceding gene: 153935041

Following gene: 153936584

Centisome position: 36.24

GC content: 26.32

Gene sequence:

>171_bases
ATGGCAAAAAAACATAAAAAAAAGACTTTATTTAGAATACTATTATCTACATTAGCCATTGGTTCCATTTTTTTAGCTTC
CAATTCTAAAGAAAATTGTTGCAAAGATAAAGATAATGATGAACATAAGGAAAGCTCTATGGATAATGAATATGACCAAT
GTAATGCTTAA

Upstream 100 bases:

>100_bases
ATGAATTCTAAACTTTATGTTAATATTAAAAATGACTATATTATACCATAAGATTTAATGTATAATTAATATAGTACATT
CATAAGAAAGGATTGATCTT

Downstream 100 bases:

>100_bases
TAAAATTTAAAATAAAGCCCCTTGTCTTGTATTTAATTTTGCTATCAAGGGGTTTTAAATTTTATATAGTTTATTTTTTA
TTATATTTTTTCATTTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 55

Protein sequence:

>56_residues
MAKKHKKKTLFRILLSTLAIGSIFLASNSKENCCKDKDNDEHKESSMDNEYDQCNA

Sequences:

>Translated_56_residues
MAKKHKKKTLFRILLSTLAIGSIFLASNSKENCCKDKDNDEHKESSMDNEYDQCNA
>Mature_55_residues
AKKHKKKTLFRILLSTLAIGSIFLASNSKENCCKDKDNDEHKESSMDNEYDQCNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6393; Mature: 6262

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKHKKKTLFRILLSTLAIGSIFLASNSKENCCKDKDNDEHKESSMDNEYDQCNA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AKKHKKKTLFRILLSTLAIGSIFLASNSKENCCKDKDNDEHKESSMDNEYDQCNA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA