Click here to switch to the map view.

The map label for this gene is 153936009

Identifier: 153936009

GI number: 153936009

Start: 1639916

End: 1640746

Strand: Direct

Name: 153936009

Synonym: CLC_1567

Alternate gene names: NA

Gene position: 1639916-1640746 (Clockwise)

Preceding gene: 153936299

Following gene: 153935321

Centisome position: 43.61

GC content: 35.62

Gene sequence:

>831_bases
ATGAATACAATGACAAGAAAAGAAATTATGAAAAAATTTAGGGAAGAAGTTAAAAATGGCAAAACATTAGTAGGAGTAGG
AGCTGGAACAGGCATTACTGCTAAAAGTAGTGAAGCTGGTGGAGCTGATATGCTTATAATTTACAATTCAGGAAGATATA
GAATGGCAGGTCGCGGATCACTGGCAGGATTATTATCTTATGGTGATGCAAACCAAATTGTGGTTGAAATGGGCTCAGAA
GTATTACCAGTTGTAAAAGATACACCAGTATTAGCAGGTGTGTGTGGAACTGATCCTTTTAGAGTTATGGATGTATATTT
AAAACAATTAAAGGATCAAGGCTTTAGTGGAGTACAAAATTTCCCAACAGTTGGTTTGATTGATGGTGTATTTAGACAAA
ACTTAGAAGAAACAGGAATGGGCTATGGTTTAGAAGTAGAAATGATTAGAAAAGCACATGAATTAGATATGCTTACAACT
CCTTATGTATTTGATCCAGAGCAAGCAAAAGCAATGGCAGAAGCAGGAGCAGATATTTTAGTAGCTCATATGGGACTAAC
TACAAAGGGAACAATCGGGGCAAAAACAGCTCTTACATTAGATGATTGCGTAAAGAAGATTGAAGATATTATTAAAGCAG
GTAGAGAAGTTAATCCAGATATTATGGTAATCTGCCACGGTGGACCTATTGCAGAACCGAAAGATGCTAAATATGTAATA
GAAAGAACAGAAGGAATTGATGGGTTCTTTGGAGCATCTAGTATTGAAAGATTTGCAGCTGAGAAAGGTATTAAGTCACA
AACAGAAGCATTTAAAGCAATAACAAAATAA

Upstream 100 bases:

>100_bases
ATTGAATTTTGCAATTAACGATGTAGAATTTGCAGAAATAGCAGCGCAAAGATTAATTGATTTAATGAATAGATAAAATT
ATATAAGGGAGGATTTATAG

Downstream 100 bases:

>100_bases
TAGCTTAGGGTGAAACAATCAACCCTGGTATTTTTAGCATGATTTTTAAAACACAATTCCAATGGAAATTTTATTTTCAC
TGGAATTGTGTTTTTATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNTMTRKEIMKKFREEVKNGKTLVGVGAGTGITAKSSEAGGADMLIIYNSGRYRMAGRGSLAGLLSYGDANQIVVEMGSE
VLPVVKDTPVLAGVCGTDPFRVMDVYLKQLKDQGFSGVQNFPTVGLIDGVFRQNLEETGMGYGLEVEMIRKAHELDMLTT
PYVFDPEQAKAMAEAGADILVAHMGLTTKGTIGAKTALTLDDCVKKIEDIIKAGREVNPDIMVICHGGPIAEPKDAKYVI
ERTEGIDGFFGASSIERFAAEKGIKSQTEAFKAITK

Sequences:

>Translated_276_residues
MNTMTRKEIMKKFREEVKNGKTLVGVGAGTGITAKSSEAGGADMLIIYNSGRYRMAGRGSLAGLLSYGDANQIVVEMGSE
VLPVVKDTPVLAGVCGTDPFRVMDVYLKQLKDQGFSGVQNFPTVGLIDGVFRQNLEETGMGYGLEVEMIRKAHELDMLTT
PYVFDPEQAKAMAEAGADILVAHMGLTTKGTIGAKTALTLDDCVKKIEDIIKAGREVNPDIMVICHGGPIAEPKDAKYVI
ERTEGIDGFFGASSIERFAAEKGIKSQTEAFKAITK
>Mature_276_residues
MNTMTRKEIMKKFREEVKNGKTLVGVGAGTGITAKSSEAGGADMLIIYNSGRYRMAGRGSLAGLLSYGDANQIVVEMGSE
VLPVVKDTPVLAGVCGTDPFRVMDVYLKQLKDQGFSGVQNFPTVGLIDGVFRQNLEETGMGYGLEVEMIRKAHELDMLTT
PYVFDPEQAKAMAEAGADILVAHMGLTTKGTIGAKTALTLDDCVKKIEDIIKAGREVNPDIMVICHGGPIAEPKDAKYVI
ERTEGIDGFFGASSIERFAAEKGIKSQTEAFKAITK

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR009215 [H]

Pfam domain/function: PF09370 TIM-br_sig_trns [H]

EC number: NA

Molecular weight: Translated: 29652; Mature: 29652

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTMTRKEIMKKFREEVKNGKTLVGVGAGTGITAKSSEAGGADMLIIYNSGRYRMAGRGS
CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCC
LAGLLSYGDANQIVVEMGSEVLPVVKDTPVLAGVCGTDPFRVMDVYLKQLKDQGFSGVQN
HHHHHCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHC
FPTVGLIDGVFRQNLEETGMGYGLEVEMIRKAHELDMLTTPYVFDPEQAKAMAEAGADIL
CCCHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHCCCCEE
VAHMGLTTKGTIGAKTALTLDDCVKKIEDIIKAGREVNPDIMVICHGGPIAEPKDAKYVI
EEECCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEE
ERTEGIDGFFGASSIERFAAEKGIKSQTEAFKAITK
ECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNTMTRKEIMKKFREEVKNGKTLVGVGAGTGITAKSSEAGGADMLIIYNSGRYRMAGRGS
CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCC
LAGLLSYGDANQIVVEMGSEVLPVVKDTPVLAGVCGTDPFRVMDVYLKQLKDQGFSGVQN
HHHHHCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHC
FPTVGLIDGVFRQNLEETGMGYGLEVEMIRKAHELDMLTTPYVFDPEQAKAMAEAGADIL
CCCHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHCCCCEE
VAHMGLTTKGTIGAKTALTLDDCVKKIEDIIKAGREVNPDIMVICHGGPIAEPKDAKYVI
EEECCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEE
ERTEGIDGFFGASSIERFAAEKGIKSQTEAFKAITK
ECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]