Click here to switch to the map view.

The map label for this gene is ywpJ [H]

Identifier: 153935864

GI number: 153935864

Start: 1721751

End: 1722611

Strand: Reverse

Name: ywpJ [H]

Synonym: CLC_1643

Alternate gene names: 153935864

Gene position: 1722611-1721751 (Counterclockwise)

Preceding gene: 153935325

Following gene: 153937109

Centisome position: 45.81

GC content: 27.76

Gene sequence:

>861_bases
ATGATGAAGTTAATAGCATTAGATTTAGATGGTACTCTATTAAATAATAAAAGTATAATAAGTAATGAAAATGCAGCTGC
CATTAGATATGCTCAGAATAAAGGAGTAGAAGTCACAATTTCCACAGGACGCCCTCATTTTGATGTATGTTCTATATGTG
AAAAAGCAAATATATCTACACATATAATTGGAAATAATGGTGCTTCTATTCATTCTAAAGATAAGAAAAAGCTATATTCC
ATAGGTATAGATAAAAAAGATGTAAAAGAGATATTACATTGGCTAACAGATAAAAACTTTTATTATGAAGTATCTACTAA
TAAAGCTATCTATACCCCTTTTAATGGAAAAGATATGTTGAAAATAGAAGCAGATAAAGTAATTAGCAGCAATCCTAACT
CTGTAAACATAGAAGAAATCTATGAATCCTGTGAAAAACAATTTATTCAAGCAGGCTTCATTTTTGTAGATAGTTATGAA
GAAATATTAAATACGGATGATGATTTTTACAATATACTTGCATTTTCTTTTGATGAAAAAAAGAGAAAATTAGGTATGAA
TTACTTTAAAAATTTAGATAGATTTTCAGTTTTCTCCTCTGGAAATCATAACTTTGAAATAGTAAATAAACATACTTCAA
AAGGAGCTTCACTAGAAAGGTTAGCCTCAAATTTAAGCATATCACTAGAAGAAACTATGGCCTTTGGTGATAATTATAAT
GATCTATCTATGTTTGAAAGAGTAAAATATAGTGTCGCTATGGGTAATGCAGATGAAAATATTAAATCAATATGTAAACT
GGTGGCAGATACTAATTATAACAATGGAGTAGCAAAGATGATCTATAAGTTTATTAGCTAA

Upstream 100 bases:

>100_bases
TAATAGTTACAGATAAACTGCCAAATAAAGATTTGACTAAAATATTTGAAGAAAATAACATAGACATTATGGCTGTAAAT
GAGAAAGGTTAAGGTGGATA

Downstream 100 bases:

>100_bases
TCTTATAGAATACATTAAAATAATAAAGCTTAATTAATCTCTTGTGGGCGTGACCTTCAGGGCGTAACCACAAGTTATTA
ATAGGGACAGGAATATTATA

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MMKLIALDLDGTLLNNKSIISNENAAAIRYAQNKGVEVTISTGRPHFDVCSICEKANISTHIIGNNGASIHSKDKKKLYS
IGIDKKDVKEILHWLTDKNFYYEVSTNKAIYTPFNGKDMLKIEADKVISSNPNSVNIEEIYESCEKQFIQAGFIFVDSYE
EILNTDDDFYNILAFSFDEKKRKLGMNYFKNLDRFSVFSSGNHNFEIVNKHTSKGASLERLASNLSISLEETMAFGDNYN
DLSMFERVKYSVAMGNADENIKSICKLVADTNYNNGVAKMIYKFIS

Sequences:

>Translated_286_residues
MMKLIALDLDGTLLNNKSIISNENAAAIRYAQNKGVEVTISTGRPHFDVCSICEKANISTHIIGNNGASIHSKDKKKLYS
IGIDKKDVKEILHWLTDKNFYYEVSTNKAIYTPFNGKDMLKIEADKVISSNPNSVNIEEIYESCEKQFIQAGFIFVDSYE
EILNTDDDFYNILAFSFDEKKRKLGMNYFKNLDRFSVFSSGNHNFEIVNKHTSKGASLERLASNLSISLEETMAFGDNYN
DLSMFERVKYSVAMGNADENIKSICKLVADTNYNNGVAKMIYKFIS
>Mature_286_residues
MMKLIALDLDGTLLNNKSIISNENAAAIRYAQNKGVEVTISTGRPHFDVCSICEKANISTHIIGNNGASIHSKDKKKLYS
IGIDKKDVKEILHWLTDKNFYYEVSTNKAIYTPFNGKDMLKIEADKVISSNPNSVNIEEIYESCEKQFIQAGFIFVDSYE
EILNTDDDFYNILAFSFDEKKRKLGMNYFKNLDRFSVFSSGNHNFEIVNKHTSKGASLERLASNLSISLEETMAFGDNYN
DLSMFERVKYSVAMGNADENIKSICKLVADTNYNNGVAKMIYKFIS

Specific function: Putative phosphatase (Potential) [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI1786982, Length=295, Percent_Identity=27.1186440677966, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI2367265, Length=293, Percent_Identity=25.2559726962457, Blast_Score=88, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 32364; Mature: 32364

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKLIALDLDGTLLNNKSIISNENAAAIRYAQNKGVEVTISTGRPHFDVCSICEKANIST
CCEEEEEECCCEEECCCCEECCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCEE
HIIGNNGASIHSKDKKKLYSIGIDKKDVKEILHWLTDKNFYYEVSTNKAIYTPFNGKDML
EEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCEEEECCCCCCEEE
KIEADKVISSNPNSVNIEEIYESCEKQFIQAGFIFVDSYEEILNTDDDFYNILAFSFDEK
EEEECHHHCCCCCEEEHHHHHHHHHHHHHHHCEEEEECHHHHHCCCCCCEEEEEECCCHH
KRKLGMNYFKNLDRFSVFSSGNHNFEIVNKHTSKGASLERLASNLSISLEETMAFGDNYN
HHHHCCHHHHCCCCEEEECCCCCCEEEEECCCCCCCHHHHHHHCCCEEEHHHHHCCCCCC
DLSMFERVKYSVAMGNADENIKSICKLVADTNYNNGVAKMIYKFIS
HHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHC
>Mature Secondary Structure
MMKLIALDLDGTLLNNKSIISNENAAAIRYAQNKGVEVTISTGRPHFDVCSICEKANIST
CCEEEEEECCCEEECCCCEECCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCEE
HIIGNNGASIHSKDKKKLYSIGIDKKDVKEILHWLTDKNFYYEVSTNKAIYTPFNGKDML
EEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCEEEECCCCCCEEE
KIEADKVISSNPNSVNIEEIYESCEKQFIQAGFIFVDSYEEILNTDDDFYNILAFSFDEK
EEEECHHHCCCCCEEEHHHHHHHHHHHHHHHCEEEEECHHHHHCCCCCCEEEEEECCCHH
KRKLGMNYFKNLDRFSVFSSGNHNFEIVNKHTSKGASLERLASNLSISLEETMAFGDNYN
HHHHCCHHHHCCCCEEEECCCCCCEEEEECCCCCCCHHHHHHHCCCEEEHHHHHCCCCCC
DLSMFERVKYSVAMGNADENIKSICKLVADTNYNNGVAKMIYKFIS
HHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]