Click here to switch to the map view.

The map label for this gene is scpA [H]

Identifier: 153935515

GI number: 153935515

Start: 1909937

End: 1910683

Strand: Reverse

Name: scpA [H]

Synonym: CLC_1800

Alternate gene names: 153935515

Gene position: 1910683-1909937 (Counterclockwise)

Preceding gene: 153937751

Following gene: 153935812

Centisome position: 50.81

GC content: 23.83

Gene sequence:

>747_bases
ATGCCATTAAATATAAAAATACATAATTTCGATGGACCTTTTGACTTATTACTACACTTAATTAAAAAGAATAAAATGGA
AATATATGATGTAAGTATATATGAAATAACTAATCAGTATTTACAATACCTAAATCAGATGGAAGAGTTAGACTTAGAAA
TAACTTCAGAGTTTATAGTTATGGCAGCTACCTTGATTGAAATAAAATCTAAATATTTATTGCCTAAAGTAGAAGAAGAA
AAAGAGGAAGAGGAGAATGATCCTCAAAAAGAACTTTTAAGCAAACTTTTAGAATACAAAAAATTTAAAGCTGCTGCAGA
GTTTTTTAAAAATCGTCAGCAGATAAGTGGAACTTCCTTTAGTAAAAAACCAGAAATTATAGAAGTTAAAAATAAAGAAA
CAACCACAGACGAATTACTTAAAGATGTAACAATGTTAAGTTTATATAATACATATAATGATTTAATAAGTAAATATTCA
AATAAAATGAATGAAAATGTGGAATTTAAAGGAGAAATACAATTAGATAAATATAAAATAGAAGATAAGATAAAATATAT
TGGTAAAAAAATAACCTCAAAAGAAAAATGTCTTTTTTCTGATTTTATAAAAGAATGTAGTTGCAAAATGGAAATAGTGG
TAACTTTTTTAGCTATACTAGAGCTTATAAAGTTAAAAACAATACAAGTATATCAGTCTAATAATTTTAATGATATATAT
ATAGAAAGAGGCGTTGTATGTGAATAA

Upstream 100 bases:

>100_bases
GAAATAGGATTAATATTAGAATATATGAAAAAATATAAAATTAATTTAGGATTATTAGATGAAGAAAATTTTTTAATAGA
TAATATGGGAGAGATAAAAA

Downstream 100 bases:

>100_bases
AGATCATGAAGAGCAATTAGAAATAAACGAAGTATCACAAAAAAATAAATATAAATCTATAATAGAATCCCTTCTATTTA
TGAGTGGAGAACCTATTAAT

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MPLNIKIHNFDGPFDLLLHLIKKNKMEIYDVSIYEITNQYLQYLNQMEELDLEITSEFIVMAATLIEIKSKYLLPKVEEE
KEEEENDPQKELLSKLLEYKKFKAAAEFFKNRQQISGTSFSKKPEIIEVKNKETTTDELLKDVTMLSLYNTYNDLISKYS
NKMNENVEFKGEIQLDKYKIEDKIKYIGKKITSKEKCLFSDFIKECSCKMEIVVTFLAILELIKLKTIQVYQSNNFNDIY
IERGVVCE

Sequences:

>Translated_248_residues
MPLNIKIHNFDGPFDLLLHLIKKNKMEIYDVSIYEITNQYLQYLNQMEELDLEITSEFIVMAATLIEIKSKYLLPKVEEE
KEEEENDPQKELLSKLLEYKKFKAAAEFFKNRQQISGTSFSKKPEIIEVKNKETTTDELLKDVTMLSLYNTYNDLISKYS
NKMNENVEFKGEIQLDKYKIEDKIKYIGKKITSKEKCLFSDFIKECSCKMEIVVTFLAILELIKLKTIQVYQSNNFNDIY
IERGVVCE
>Mature_247_residues
PLNIKIHNFDGPFDLLLHLIKKNKMEIYDVSIYEITNQYLQYLNQMEELDLEITSEFIVMAATLIEIKSKYLLPKVEEEK
EEEENDPQKELLSKLLEYKKFKAAAEFFKNRQQISGTSFSKKPEIIEVKNKETTTDELLKDVTMLSLYNTYNDLISKYSN
KMNENVEFKGEIQLDKYKIEDKIKYIGKKITSKEKCLFSDFIKECSCKMEIVVTFLAILELIKLKTIQVYQSNNFNDIYI
ERGVVCE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 29261; Mature: 29130

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLNIKIHNFDGPFDLLLHLIKKNKMEIYDVSIYEITNQYLQYLNQMEELDLEITSEFIV
CCCEEEEECCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MAATLIEIKSKYLLPKVEEEKEEEENDPQKELLSKLLEYKKFKAAAEFFKNRQQISGTSF
HHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SKKPEIIEVKNKETTTDELLKDVTMLSLYNTYNDLISKYSNKMNENVEFKGEIQLDKYKI
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHH
EDKIKYIGKKITSKEKCLFSDFIKECSCKMEIVVTFLAILELIKLKTIQVYQSNNFNDIY
HHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEE
IERGVVCE
EECCCCCC
>Mature Secondary Structure 
PLNIKIHNFDGPFDLLLHLIKKNKMEIYDVSIYEITNQYLQYLNQMEELDLEITSEFIV
CCEEEEECCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MAATLIEIKSKYLLPKVEEEKEEEENDPQKELLSKLLEYKKFKAAAEFFKNRQQISGTSF
HHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SKKPEIIEVKNKETTTDELLKDVTMLSLYNTYNDLISKYSNKMNENVEFKGEIQLDKYKI
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHH
EDKIKYIGKKITSKEKCLFSDFIKECSCKMEIVVTFLAILELIKLKTIQVYQSNNFNDIY
HHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEE
IERGVVCE
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]