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The map label for this gene is birA [H]

Identifier: 153935394

GI number: 153935394

Start: 1200479

End: 1201462

Strand: Reverse

Name: birA [H]

Synonym: CLC_1168

Alternate gene names: 153935394

Gene position: 1201462-1200479 (Counterclockwise)

Preceding gene: 153936932

Following gene: 153935580

Centisome position: 31.95

GC content: 27.24

Gene sequence:

>984_bases
TTGAAAGAAGCTATAGTAAATATATTAAAAAATAGTTCCCATACATTTATATCTGGACAATATATTAGTGATAAGTTAGG
TGTTTCAAGAACAGCCATTTGGAAATATATAAATGGACTAAAAAAAGAAGGTTATAATATAGAATCTGCATCAAAAAAAG
GATATAGATTAATTTCTTGTCCTGATATTTTGACCTTTGAAGAAATTATAAGTCTATTAAAAACTAAAGTTATAGGTCAA
AATATTATTCATTTTGACTCTATTAATTCTACTAATGACAAAGCGAAAAAAATAGCCTCTTCTGAAAATGATGGTACAAT
AATAATATCTGAAGAACAAACTCTAGGGAAGGGGCGCTTAGGTAGAACTTGGTTCTCTTCCAAATTTAAAGGTATCTATA
TGTCCATTATATTAAAGCCAGACATAAACACTATGGATGTCCCTAAAATAACTCAAATAGCCGCTGCTGCTGTATTAACA
GCTTTACTTAATAATAATATTAAAGCTTATATAAAATGGCCTAATGATATTATAGTAAATAATAAAAAAGTATGTGGTAT
TTTAACAGAAATGAGCGGAGAGATAAACAAAGTAAATTATGTAGTAGTGGGTATGGGCATAAATGTAAATTGTGAAGAAG
AAGATATACCAAAGGATTTACTTTCAAAGGCAACATCTTTAAAAATAGAAAAAGACAGAGAATTTAAAAGAAATATTCTA
GTTGCAGATATACTAAATAATTTTGAAAACCTATATACAGAACTTATAGAATGTAATAATATAGATACTTCTATAGAAAT
ATGCAAAGAAAATTCTATACTAATTGGAAAAGAAGTTAGAATAATAAACAGAACTAGAGAAAGCTTTGGAAAAGCTGTAG
GTTTAAACTCTAATGGTGAACTTTTAGTTCAATTTGAAAATGGAGAAATAAAACCACTAATTTCTGGAGAAATATCTGTA
AGAGGAATGAATGGATACGTATAA

Upstream 100 bases:

>100_bases
TGATAAAACAATTTAAGTTTAAAATATTATATTATAAATATTTTTATGTAGTATAATATAATAAAGAAACTTTTAGTTAT
AAACTAAGGAGGCAAATAGT

Downstream 100 bases:

>100_bases
GGAAATTGCGACTTAACAGCCTTTAAAGGTTGGAAATTAAAACAAGAAATACTTTTAGTCAATAGATAGCTATAAAAATA
AAGAATACTAATATTTGTGT

Product: birA bifunctional protein

Products: NA

Alternate protein names: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase; Biotin--protein ligase [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKEAIVNILKNSSHTFISGQYISDKLGVSRTAIWKYINGLKKEGYNIESASKKGYRLISCPDILTFEEIISLLKTKVIGQ
NIIHFDSINSTNDKAKKIASSENDGTIIISEEQTLGKGRLGRTWFSSKFKGIYMSIILKPDINTMDVPKITQIAAAAVLT
ALLNNNIKAYIKWPNDIIVNNKKVCGILTEMSGEINKVNYVVVGMGINVNCEEEDIPKDLLSKATSLKIEKDREFKRNIL
VADILNNFENLYTELIECNNIDTSIEICKENSILIGKEVRIINRTRESFGKAVGLNSNGELLVQFENGEIKPLISGEISV
RGMNGYV

Sequences:

>Translated_327_residues
MKEAIVNILKNSSHTFISGQYISDKLGVSRTAIWKYINGLKKEGYNIESASKKGYRLISCPDILTFEEIISLLKTKVIGQ
NIIHFDSINSTNDKAKKIASSENDGTIIISEEQTLGKGRLGRTWFSSKFKGIYMSIILKPDINTMDVPKITQIAAAAVLT
ALLNNNIKAYIKWPNDIIVNNKKVCGILTEMSGEINKVNYVVVGMGINVNCEEEDIPKDLLSKATSLKIEKDREFKRNIL
VADILNNFENLYTELIECNNIDTSIEICKENSILIGKEVRIINRTRESFGKAVGLNSNGELLVQFENGEIKPLISGEISV
RGMNGYV
>Mature_327_residues
MKEAIVNILKNSSHTFISGQYISDKLGVSRTAIWKYINGLKKEGYNIESASKKGYRLISCPDILTFEEIISLLKTKVIGQ
NIIHFDSINSTNDKAKKIASSENDGTIIISEEQTLGKGRLGRTWFSSKFKGIYMSIILKPDINTMDVPKITQIAAAAVLT
ALLNNNIKAYIKWPNDIIVNNKKVCGILTEMSGEINKVNYVVVGMGINVNCEEEDIPKDLLSKATSLKIEKDREFKRNIL
VADILNNFENLYTELIECNNIDTSIEICKENSILIGKEVRIINRTRESFGKAVGLNSNGELLVQFENGEIKPLISGEISV
RGMNGYV

Specific function: BirA acts both as a biotin-operon repressor and as the enzyme that synthesizes the corepressor, acetyl-CoA:carbon-dioxide ligase. This protein also activates biotin to form biotinyl-5'- adenylate and transfers the biotin moiety to biotin-accepting protein

COG id: COG0340

COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the biotin--protein ligase family [H]

Homologues:

Organism=Escherichia coli, GI1790408, Length=320, Percent_Identity=27.8125, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: =6.3.4.15 [H]

Molecular weight: Translated: 36459; Mature: 36459

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEAIVNILKNSSHTFISGQYISDKLGVSRTAIWKYINGLKKEGYNIESASKKGYRLISC
CHHHHHHHHHCCCCEEEECEEECHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
PDILTFEEIISLLKTKVIGQNIIHFDSINSTNDKAKKIASSENDGTIIISEEQTLGKGRL
CCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCC
GRTWFSSKFKGIYMSIILKPDINTMDVPKITQIAAAAVLTALLNNNIKAYIKWPNDIIVN
CCHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEC
NKKVCGILTEMSGEINKVNYVVVGMGINVNCEEEDIPKDLLSKATSLKIEKDREFKRNIL
CCHHEEEEECCCCCCEEEEEEEEEECEECCCCHHCCCHHHHHHHHCEEEECCHHHHHHHH
VADILNNFENLYTELIECNNIDTSIEICKENSILIGKEVRIINRTRESFGKAVGLNSNGE
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECEEEEHHHHHHHHCCEECCCCCCC
LLVQFENGEIKPLISGEISVRGMNGYV
EEEEECCCCCCEEECCEEEEEECCCCC
>Mature Secondary Structure
MKEAIVNILKNSSHTFISGQYISDKLGVSRTAIWKYINGLKKEGYNIESASKKGYRLISC
CHHHHHHHHHCCCCEEEECEEECHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
PDILTFEEIISLLKTKVIGQNIIHFDSINSTNDKAKKIASSENDGTIIISEEQTLGKGRL
CCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCC
GRTWFSSKFKGIYMSIILKPDINTMDVPKITQIAAAAVLTALLNNNIKAYIKWPNDIIVN
CCHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEC
NKKVCGILTEMSGEINKVNYVVVGMGINVNCEEEDIPKDLLSKATSLKIEKDREFKRNIL
CCHHEEEEECCCCCCEEEEEEEEEECEECCCCHHCCCHHHHHHHHCEEEECCHHHHHHHH
VADILNNFENLYTELIECNNIDTSIEICKENSILIGKEVRIINRTRESFGKAVGLNSNGE
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECEEEEHHHHHHHHCCEECCCCCCC
LLVQFENGEIKPLISGEISVRGMNGYV
EEEEECCCCCCEEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7730294 [H]