Click here to switch to the map view.

The map label for this gene is 153934870

Identifier: 153934870

GI number: 153934870

Start: 1881904

End: 1883643

Strand: Direct

Name: 153934870

Synonym: CLC_1774

Alternate gene names: NA

Gene position: 1881904-1883643 (Clockwise)

Preceding gene: 153937163

Following gene: 153937061

Centisome position: 50.04

GC content: 26.72

Gene sequence:

>1740_bases
ATGGATTATATAAATTTTAAAAAGGCTAATTGTAAAAATTGTTATAAATGCTTAAGAAGTTGTCCTGTAAAGGCTATAAA
ATTTAAAAATTATCAGGCAAAGATAGAAATGGAAAGATGTATATTGTGCAGTCGTTGTGTTTTAGTGTGCCCTCAAAATG
CAAGAAAAGTGGTTAATTACTTAGATAAGGTAAAGAAAGCTTTAAATGAAAAGAAAAAAATAGTAGCCTCAATTGCTCCT
TCTTTTATGGGAAATTTTAATGTATCCTATGGAAAAATAATAGCTTCGTTAAAAACATTAGGTATAAAATATGCAGAAGA
AACTGCTTTAGGTGCGGATATTACTACTAGACTATATAAAAGCTTTTTAAAAGAAAACAAGCAAGATTACTATATTACAA
CAGCTTGCCATTCTTTGAATCTTCTTGTTGAAAAATATTATCCAGAGTTAGTAAAATATATGCTTCCTTTTATGTCCCCT
ATGGCTTGTCATGGGAAAATATTAAAAAAAGTATATGGTAAAGACTCCTTTACATTATTTATAGGACCTTGCACTTCTAA
AAAAGCGGAACATGAAAACTATAATTTTGAAAATAGTATAGATGCTGTTTTAACCTATGAAGAGTATTTGACTTTATTGA
AAGAAAATAATATAAGTATGGAAAGCTTAGACCCTTTAGAGTTTGATAATAGATCTTTAGAATTAGGTAGTTATTATCCT
ATTGCTGGAGGTATTATTAGTAATCTAAAAGATGAGTTAAAGGATAAAAATATAAAGTCTTTTTATGTAGATGGAGTATA
TGCCTGTATGGATATTTTTGAAAGTATAAAAAAAGGACATATAAAAAACTCTTTTATAGAAGCTAGTACTTGTGTTGGTA
GTTGTATAGGTGGTCCTGAAGTTATAACTAATAATCATGAATATTATAATAAGCTAGAAAAGGTTCAAAATTATATTGAA
GATAGACAGAACTATATAGAATTCTATAAAAACAAAACGGATAAGCAAAATGATTTAAAAAATTTCAACTTAAACTTTCA
TAGAGGTTTTGTAGATAAATCTATAAATAAAGAAATACAATATGAAGAGCAAATTAAAAATATATTAAAATCTATGGGAA
AATATAGTAAAGAGGATGAACTCAATTGTGGTGTCTGTGGGTATAATACTTGTATAGATAAAGCTAATGCTATTTTAGAG
GGGATGGCAGAACCAGATATGTGTCTTCACTTTATGCGAAGTAAGGCTGAAAATATATCCAATATAATTTTTGAAAATAC
AGTTAATTGTATAATAACGGTAGATGATAAATTAAATATAATAGAAATAAACCCTGCCGCTGAAAAAACTTTTATGTTAG
AGAAAAGCCTGGTTAAAAATAAGCCAATAAATTTTCTAATAAGTGAAGAAGATTTTGTTAAAGTTAAAGAAAGTAAAAAT
AATATTTTAGGTAAAAAAGTTACTATTCATAATTATGGATTAGTATTTATAGAAAGTATTATTTTTATAGAAAAGCAAAA
CATTTTTCTTCTATCTCTAACGGATATAACAGAAAAAGAAAAGAATAAGAAAAAACTAAAGACACTTAAAGAAAGTTCTT
TTAGTGCAGCAGAAGAAGTAATAGAAAAACAAATGAGAGTAGCTCAAGAAATTGCTAGCCTTTTAGGAGAAACTACTGCA
GAAACAAAAATAACTTTAACCAAATTAAAAAGAATAGTAGAATCCTCCGATGAAGATTGA

Upstream 100 bases:

>100_bases
ATGGTAATCTAAATGTAGCATAGAGTTTTTAATAAATTATTATTATATGATAATTTTAATTCATCTACCTTAAATCTTTC
CTTTAGTAAGGAGGAAAACT

Downstream 100 bases:

>100_bases
TTTATTTCAAGTAGTTAATTTAAGGTGGAAAAGTCATTTTTGGCTTTTTCACTTAGTTCTCACATCCTATAAGAATTAGG
CCAATTTTCAATTCCCCCAT

Product: sensory box-containing [Fe] hydrogenase

Products: NA

Alternate protein names: CpI; Fe-only hydrogenase; [Fe] hydrogenase [H]

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MDYINFKKANCKNCYKCLRSCPVKAIKFKNYQAKIEMERCILCSRCVLVCPQNARKVVNYLDKVKKALNEKKKIVASIAP
SFMGNFNVSYGKIIASLKTLGIKYAEETALGADITTRLYKSFLKENKQDYYITTACHSLNLLVEKYYPELVKYMLPFMSP
MACHGKILKKVYGKDSFTLFIGPCTSKKAEHENYNFENSIDAVLTYEEYLTLLKENNISMESLDPLEFDNRSLELGSYYP
IAGGIISNLKDELKDKNIKSFYVDGVYACMDIFESIKKGHIKNSFIEASTCVGSCIGGPEVITNNHEYYNKLEKVQNYIE
DRQNYIEFYKNKTDKQNDLKNFNLNFHRGFVDKSINKEIQYEEQIKNILKSMGKYSKEDELNCGVCGYNTCIDKANAILE
GMAEPDMCLHFMRSKAENISNIIFENTVNCIITVDDKLNIIEINPAAEKTFMLEKSLVKNKPINFLISEEDFVKVKESKN
NILGKKVTIHNYGLVFIESIIFIEKQNIFLLSLTDITEKEKNKKKLKTLKESSFSAAEEVIEKQMRVAQEIASLLGETTA
ETKITLTKLKRIVESSDED

Sequences:

>Translated_579_residues
MDYINFKKANCKNCYKCLRSCPVKAIKFKNYQAKIEMERCILCSRCVLVCPQNARKVVNYLDKVKKALNEKKKIVASIAP
SFMGNFNVSYGKIIASLKTLGIKYAEETALGADITTRLYKSFLKENKQDYYITTACHSLNLLVEKYYPELVKYMLPFMSP
MACHGKILKKVYGKDSFTLFIGPCTSKKAEHENYNFENSIDAVLTYEEYLTLLKENNISMESLDPLEFDNRSLELGSYYP
IAGGIISNLKDELKDKNIKSFYVDGVYACMDIFESIKKGHIKNSFIEASTCVGSCIGGPEVITNNHEYYNKLEKVQNYIE
DRQNYIEFYKNKTDKQNDLKNFNLNFHRGFVDKSINKEIQYEEQIKNILKSMGKYSKEDELNCGVCGYNTCIDKANAILE
GMAEPDMCLHFMRSKAENISNIIFENTVNCIITVDDKLNIIEINPAAEKTFMLEKSLVKNKPINFLISEEDFVKVKESKN
NILGKKVTIHNYGLVFIESIIFIEKQNIFLLSLTDITEKEKNKKKLKTLKESSFSAAEEVIEKQMRVAQEIASLLGETTA
ETKITLTKLKRIVESSDED
>Mature_579_residues
MDYINFKKANCKNCYKCLRSCPVKAIKFKNYQAKIEMERCILCSRCVLVCPQNARKVVNYLDKVKKALNEKKKIVASIAP
SFMGNFNVSYGKIIASLKTLGIKYAEETALGADITTRLYKSFLKENKQDYYITTACHSLNLLVEKYYPELVKYMLPFMSP
MACHGKILKKVYGKDSFTLFIGPCTSKKAEHENYNFENSIDAVLTYEEYLTLLKENNISMESLDPLEFDNRSLELGSYYP
IAGGIISNLKDELKDKNIKSFYVDGVYACMDIFESIKKGHIKNSFIEASTCVGSCIGGPEVITNNHEYYNKLEKVQNYIE
DRQNYIEFYKNKTDKQNDLKNFNLNFHRGFVDKSINKEIQYEEQIKNILKSMGKYSKEDELNCGVCGYNTCIDKANAILE
GMAEPDMCLHFMRSKAENISNIIFENTVNCIITVDDKLNIIEINPAAEKTFMLEKSLVKNKPINFLISEEDFVKVKESKN
NILGKKVTIHNYGLVFIESIIFIEKQNIFLLSLTDITEKEKNKKKLKTLKESSFSAAEEVIEKQMRVAQEIASLLGETTA
ETKITLTKLKRIVESSDED

Specific function: Unknown

COG id: COG4624

COG function: function code R; Iron only hydrogenase large subunit, C-terminal domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012675
- InterPro:   IPR009016
- InterPro:   IPR004108
- InterPro:   IPR003149
- InterPro:   IPR013352
- InterPro:   IPR001041 [H]

Pfam domain/function: PF02906 Fe_hyd_lg_C; PF02256 Fe_hyd_SSU [H]

EC number: =1.12.7.2 [H]

Molecular weight: Translated: 66369; Mature: 66369

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYINFKKANCKNCYKCLRSCPVKAIKFKNYQAKIEMERCILCSRCVLVCPQNARKVVNY
CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LDKVKKALNEKKKIVASIAPSFMGNFNVSYGKIIASLKTLGIKYAEETALGADITTRLYK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHH
SFLKENKQDYYITTACHSLNLLVEKYYPELVKYMLPFMSPMACHGKILKKVYGKDSFTLF
HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEE
IGPCTSKKAEHENYNFENSIDAVLTYEEYLTLLKENNISMESLDPLEFDNRSLELGSYYP
EECCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCC
IAGGIISNLKDELKDKNIKSFYVDGVYACMDIFESIKKGHIKNSFIEASTCVGSCIGGPE
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
VITNNHEYYNKLEKVQNYIEDRQNYIEFYKNKTDKQNDLKNFNLNFHRGFVDKSINKEIQ
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHCCCCC
YEEQIKNILKSMGKYSKEDELNCGVCGYNTCIDKANAILEGMAEPDMCLHFMRSKAENIS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
NIIFENTVNCIITVDDKLNIIEINPAAEKTFMLEKSLVKNKPINFLISEEDFVKVKESKN
HHHHHCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCC
NILGKKVTIHNYGLVFIESIIFIEKQNIFLLSLTDITEKEKNKKKLKTLKESSFSAAEEV
CCCCCEEEEECCHHHHHHHHHHEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
IEKQMRVAQEIASLLGETTAETKITLTKLKRIVESSDED
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDYINFKKANCKNCYKCLRSCPVKAIKFKNYQAKIEMERCILCSRCVLVCPQNARKVVNY
CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LDKVKKALNEKKKIVASIAPSFMGNFNVSYGKIIASLKTLGIKYAEETALGADITTRLYK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHH
SFLKENKQDYYITTACHSLNLLVEKYYPELVKYMLPFMSPMACHGKILKKVYGKDSFTLF
HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEE
IGPCTSKKAEHENYNFENSIDAVLTYEEYLTLLKENNISMESLDPLEFDNRSLELGSYYP
EECCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCC
IAGGIISNLKDELKDKNIKSFYVDGVYACMDIFESIKKGHIKNSFIEASTCVGSCIGGPE
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
VITNNHEYYNKLEKVQNYIEDRQNYIEFYKNKTDKQNDLKNFNLNFHRGFVDKSINKEIQ
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHCCCCC
YEEQIKNILKSMGKYSKEDELNCGVCGYNTCIDKANAILEGMAEPDMCLHFMRSKAENIS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
NIIFENTVNCIITVDDKLNIIEINPAAEKTFMLEKSLVKNKPINFLISEEDFVKVKESKN
HHHHHCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCC
NILGKKVTIHNYGLVFIESIIFIEKQNIFLLSLTDITEKEKNKKKLKTLKESSFSAAEEV
CCCCCEEEEECCHHHHHHHHHHEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
IEKQMRVAQEIASLLGETTAETKITLTKLKRIVESSDED
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1911757; 9836629; 10529166 [H]