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The map label for this gene is 153934733

Identifier: 153934733

GI number: 153934733

Start: 1647426

End: 1648280

Strand: Direct

Name: 153934733

Synonym: CLC_1574

Alternate gene names: NA

Gene position: 1647426-1648280 (Clockwise)

Preceding gene: 153937417

Following gene: 153937686

Centisome position: 43.81

GC content: 30.06

Gene sequence:

>855_bases
ATGGCAAAAATAAGTTTAGATAATTTAATTAGTAAAGTTGATGATATGCCTGTTCTACCAGAGAGAATAAATAGAATAAT
ATCTCTTGCAGAAGATCCTTATTCTACAGTAGAGGAACTGGAAAAGGAGATATTAACTGACCAAAGTCTTACATCAAAAA
TATTAAAATTAGCAAATTCAACCTATTATGGATATGCTAGAAGAATTGATACTGTGTCAGAAGCTGCTGTACTTTTAGGT
GCTCAAGCAATAAAAAGTTTGGCTCTTGCATCAGCAGTAAGTGAATATCTTGTAAAAGAACTTCCTGGAGGATATGGTCT
TGAGAAATACGAGCTTTGGAATCAATCTCAAAGTTGTGCTATAATAGCAAGATTTATAGCTAAAAAATTAAAATATCCTA
AAGCTGAACAAGCCTATGTTGCAGGTCTTTTAAGAGATATTGGTAAAACTATATTAAATTATTATGTAGCTAAAGAATAT
CAAACAATAATAAATAAAGTAGATGAAAATGGAAAAACCTTTGTAGAAGCAGAGGAAGAGATTCTCGGCTTTAATCATGG
AGAAGTAGGAGCTAAAATAGCTGAAAAATGGAACTTTCCATTATCTTTAGTAGAAAGTATTCGTTATCATCATTCACCAG
AATTATCAAAAGAAGATCCTAAATTGGTTTCTATAGTACATATAGCGGATTCTATTACTATGATGTTGGGAGTAGGTATT
GGAAATGACGGACTATCCTATAAATTTTCGGATTTTGTCCTTGAAACTTTAAATATAAAAGGAGAAGTTATTGAAAGTAT
AATTTGTGAATCAGTAGATTACTTAAATGATAACGATAGTTTTAATATTATTTAA

Upstream 100 bases:

>100_bases
TAAATGGTAAATATCTATAAAAGGTTTAAGTATTTAATTAGATATAGCGATAATATATAATATTATAAAAAATATTTTAT
ATGAAATGGGTGTTCAAAAT

Downstream 100 bases:

>100_bases
ATGTTGAAAAATTTATAATATATTATTGATGCATAAACCAGATTACATAAATAATCTTTTAGATTATAATATTGATTTAG
TCTTAACTGGACATAGCCAT

Product: HDIG domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MAKISLDNLISKVDDMPVLPERINRIISLAEDPYSTVEELEKEILTDQSLTSKILKLANSTYYGYARRIDTVSEAAVLLG
AQAIKSLALASAVSEYLVKELPGGYGLEKYELWNQSQSCAIIARFIAKKLKYPKAEQAYVAGLLRDIGKTILNYYVAKEY
QTIINKVDENGKTFVEAEEEILGFNHGEVGAKIAEKWNFPLSLVESIRYHHSPELSKEDPKLVSIVHIADSITMMLGVGI
GNDGLSYKFSDFVLETLNIKGEVIESIICESVDYLNDNDSFNII

Sequences:

>Translated_284_residues
MAKISLDNLISKVDDMPVLPERINRIISLAEDPYSTVEELEKEILTDQSLTSKILKLANSTYYGYARRIDTVSEAAVLLG
AQAIKSLALASAVSEYLVKELPGGYGLEKYELWNQSQSCAIIARFIAKKLKYPKAEQAYVAGLLRDIGKTILNYYVAKEY
QTIINKVDENGKTFVEAEEEILGFNHGEVGAKIAEKWNFPLSLVESIRYHHSPELSKEDPKLVSIVHIADSITMMLGVGI
GNDGLSYKFSDFVLETLNIKGEVIESIICESVDYLNDNDSFNII
>Mature_283_residues
AKISLDNLISKVDDMPVLPERINRIISLAEDPYSTVEELEKEILTDQSLTSKILKLANSTYYGYARRIDTVSEAAVLLGA
QAIKSLALASAVSEYLVKELPGGYGLEKYELWNQSQSCAIIARFIAKKLKYPKAEQAYVAGLLRDIGKTILNYYVAKEYQ
TIINKVDENGKTFVEAEEEILGFNHGEVGAKIAEKWNFPLSLVESIRYHHSPELSKEDPKLVSIVHIADSITMMLGVGIG
NDGLSYKFSDFVLETLNIKGEVIESIICESVDYLNDNDSFNII

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR013976 [H]

Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 31668; Mature: 31536

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKISLDNLISKVDDMPVLPERINRIISLAEDPYSTVEELEKEILTDQSLTSKILKLANS
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
TYYGYARRIDTVSEAAVLLGAQAIKSLALASAVSEYLVKELPGGYGLEKYELWNQSQSCA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHH
IIARFIAKKLKYPKAEQAYVAGLLRDIGKTILNYYVAKEYQTIINKVDENGKTFVEAEEE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ILGFNHGEVGAKIAEKWNFPLSLVESIRYHHSPELSKEDPKLVSIVHIADSITMMLGVGI
HHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
GNDGLSYKFSDFVLETLNIKGEVIESIICESVDYLNDNDSFNII
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AKISLDNLISKVDDMPVLPERINRIISLAEDPYSTVEELEKEILTDQSLTSKILKLANS
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
TYYGYARRIDTVSEAAVLLGAQAIKSLALASAVSEYLVKELPGGYGLEKYELWNQSQSCA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHH
IIARFIAKKLKYPKAEQAYVAGLLRDIGKTILNYYVAKEYQTIINKVDENGKTFVEAEEE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ILGFNHGEVGAKIAEKWNFPLSLVESIRYHHSPELSKEDPKLVSIVHIADSITMMLGVGI
HHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
GNDGLSYKFSDFVLETLNIKGEVIESIICESVDYLNDNDSFNII
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]