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The map label for this gene is clpP-1 [H]

Identifier: 153934679

GI number: 153934679

Start: 2382958

End: 2383650

Strand: Reverse

Name: clpP-1 [H]

Synonym: CLC_2255

Alternate gene names: 153934679

Gene position: 2383650-2382958 (Counterclockwise)

Preceding gene: 153935207

Following gene: 153936780

Centisome position: 63.39

GC content: 32.76

Gene sequence:

>693_bases
ATGGCAGATGAAAAAGAAAGAAATGAAAAGATAGATACTTTAAAAGAATTTGGAACTACAAATTTACCACCAAGACAGGC
AGATAGAATTCAAGTTCTACCTATAATAGGGCAGATAGAAGGACATATGGTGCTATCTCCTCAAACTAAGGCTACAAGAT
ACGAACATTTAATCCCTCAGCTAATAGCTTTAGAAACTTCCAAAGAGGTAGAAGGAGTTTTTATAATATTAAATACTGTG
GGAGGAGATGTGGAAGCTGGGCTTGCCATTGCTGAAATGATAAGAAGCTTAAGTAAACCTACAGTATCTTTAGTAATAGG
AGGAGGACATTCTATAGGAGTACCCTTAGCTACGTCAGCGGATTATTCTTTTATATCTCCTACAGCCACAATGATAGTTC
ATCCTATAAGAATGAATGGGCTAATAATAGGAGTTCCTCAAACCTTTGAATATTTTAATAAAATGCAAGAGAGAATAATA
GAATTTATAGTTAGAACCTCTAAAATAAGCAAGGAAAAGTTAAAAGAATTTATGTTGCAAAGTGATGAGTTGTTAAATGA
TATGGGAACTATACTTATAGGAAAACAAGCGGTAGAATCAGGAATTATAAATGAAGTAGGTGGAGTAAAAGAGGCTTTAG
ATAAATTAAATAATTTAATAGATGAAAAACAAAAAGAGGATGTCTCAAAATAG

Upstream 100 bases:

>100_bases
AGACTAAATGTTTTAAATATATAAATTAATATTTTTTATGTATAGTACCTCTACCATATGCACAAGATATTTATATGCAT
ATGGTAGGAGGTAATTATTT

Downstream 100 bases:

>100_bases
CCTTAATTTTAAAACCGTAAATATAAATAATACATCCATAAAGCAATTCATTTTGCTAAGCAGTTCTAAATTTGACTCCA
TTAAAAATTTTTTACCCAGT

Product: Clp protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MADEKERNEKIDTLKEFGTTNLPPRQADRIQVLPIIGQIEGHMVLSPQTKATRYEHLIPQLIALETSKEVEGVFIILNTV
GGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGVPLATSADYSFISPTATMIVHPIRMNGLIIGVPQTFEYFNKMQERII
EFIVRTSKISKEKLKEFMLQSDELLNDMGTILIGKQAVESGIINEVGGVKEALDKLNNLIDEKQKEDVSK

Sequences:

>Translated_230_residues
MADEKERNEKIDTLKEFGTTNLPPRQADRIQVLPIIGQIEGHMVLSPQTKATRYEHLIPQLIALETSKEVEGVFIILNTV
GGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGVPLATSADYSFISPTATMIVHPIRMNGLIIGVPQTFEYFNKMQERII
EFIVRTSKISKEKLKEFMLQSDELLNDMGTILIGKQAVESGIINEVGGVKEALDKLNNLIDEKQKEDVSK
>Mature_229_residues
ADEKERNEKIDTLKEFGTTNLPPRQADRIQVLPIIGQIEGHMVLSPQTKATRYEHLIPQLIALETSKEVEGVFIILNTVG
GDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGVPLATSADYSFISPTATMIVHPIRMNGLIIGVPQTFEYFNKMQERIIE
FIVRTSKISKEKLKEFMLQSDELLNDMGTILIGKQAVESGIINEVGGVKEALDKLNNLIDEKQKEDVSK

Specific function: Required for efficient translocation of pre-proteins across the membrane [H]

COG id: COG0740

COG function: function code OU; Protease subunit of ATP-dependent Clp proteases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S14 family. TepA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001907 [H]

Pfam domain/function: PF00574 CLP_protease [H]

EC number: 3.4.21.92

Molecular weight: Translated: 25368; Mature: 25237

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADEKERNEKIDTLKEFGTTNLPPRQADRIQVLPIIGQIEGHMVLSPQTKATRYEHLIPQ
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHHHHH
LIALETSKEVEGVFIILNTVGGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGVPLATSA
HHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCEECCEEECCC
DYSFISPTATMIVHPIRMNGLIIGVPQTFEYFNKMQERIIEFIVRTSKISKEKLKEFMLQ
CCCCCCCCHHHHEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SDELLNDMGTILIGKQAVESGIINEVGGVKEALDKLNNLIDEKQKEDVSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADEKERNEKIDTLKEFGTTNLPPRQADRIQVLPIIGQIEGHMVLSPQTKATRYEHLIPQ
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHHHHH
LIALETSKEVEGVFIILNTVGGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGVPLATSA
HHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCEECCEEECCC
DYSFISPTATMIVHPIRMNGLIIGVPQTFEYFNKMQERIIEFIVRTSKISKEKLKEFMLQ
CCCCCCCCHHHHEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SDELLNDMGTILIGKQAVESGIINEVGGVKEALDKLNNLIDEKQKEDVSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3129532; 10455123 [H]