| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is yrrL [H]
Identifier: 153934051
GI number: 153934051
Start: 2606145
End: 2607176
Strand: Reverse
Name: yrrL [H]
Synonym: CLB_2498
Alternate gene names: 153934051
Gene position: 2607176-2606145 (Counterclockwise)
Preceding gene: 153931508
Following gene: 153933640
Centisome position: 67.48
GC content: 27.13
Gene sequence:
>1032_bases ATGAAAAATAAAAACAGGCTAATTATTTTAGGAATGGCTATAGTTGTAGTTTTAGCTATAGGTTTTGTATCCATTAAGTA TTATGACAGAAAAATTTTAAGAGCTCCATTAAAAGTAGCGGAAAATGGAGTCATTAATGTTGTTGTAGACAAGGACCAGA GTTTAAATGAAGTTATAGAAAAAATAGATAAAGAAGGAAAAATTAAAAGTAAAAGAGTATTAAAAAATTATATTAAGAAA GTACAAGCACCACAAAAGGTAGTTCCAGGAGAATATGTATTTTCTGCTAATTTAAATGCTTATGATTTATTGCTTAATTT AAAGGACGGTATATATGATAATAGACCTATAAAAGTTACTATTCCAGAAGGGTGTAATATAGATGAAATAGGAAATAAAT TGGAGAAACAGGGAATAATAAAGAAAGAAGATTTTATAAAAAGTGTAAAAGAATACAAAACCCCTTCTTTTGCAAAAGAA GATAAAAACAGGAAATATCCTTTGGAGGGGTACTTATTTCCAGATACTTACGAGTTTTTTAAAGGTATGCAAGGAGATAA AATAATAGATAAGATGCTAGACAGGTTTAATTATGTTATTAAAGAAATAGAAAAAGAAAATAATATAAAAATAAAAGATG AAGACATAGATAAATTAATTAGCATGGCATCTGTTATAGAGAAAGAAGCTGAAAAAGATAGTGAAAGAGGTAAGGTGGCC TCTGTATTTTATAATAGAATAGATAAAAAAATGAAGATGGAATCCTGCGCTACAGTATTGTATGCATTAGGATATCATAA AGACAAATTATATTATAAAGATCTAAAAATAAAGTCTCCTTATAATACTTATTTGAATATGGGATTACCTATAGGACCTA TATGTTCTCCAGGTAAAAGTTCCATAAAGGCAGCATTAAATCCAGAAAAAACAGATTATATATATTTTGTTTCTAAAAAT GATGGAACTCACTTTTTTACAAAGAACTATAACGATTTTTTAAAGGTGAAAAAGGAAACTCAAGGAGATTAA
Upstream 100 bases:
>100_bases AAGCTACAATAAGAAAAAAATAAATAGTCATTATAATTCTAAACGAACAACTAGCTTAGAGCTGGTTGTTTGTCTATATT AACCTATGGGTGGTGATTTT
Downstream 100 bases:
>100_bases TATATTTTGCTGCAGGTGACCTACAATATTTTAAAATTAAAAGGTCACCTTGTGTATTATTAGTTTTAAATTGGAGGTAA ATATGAGTAAAGTAGCCTAT
Product: hypothetical protein
Products: 4-aminobenzoate; pyruvate
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKNKNRLIILGMAIVVVLAIGFVSIKYYDRKILRAPLKVAENGVINVVVDKDQSLNEVIEKIDKEGKIKSKRVLKNYIKK VQAPQKVVPGEYVFSANLNAYDLLLNLKDGIYDNRPIKVTIPEGCNIDEIGNKLEKQGIIKKEDFIKSVKEYKTPSFAKE DKNRKYPLEGYLFPDTYEFFKGMQGDKIIDKMLDRFNYVIKEIEKENNIKIKDEDIDKLISMASVIEKEAEKDSERGKVA SVFYNRIDKKMKMESCATVLYALGYHKDKLYYKDLKIKSPYNTYLNMGLPIGPICSPGKSSIKAALNPEKTDYIYFVSKN DGTHFFTKNYNDFLKVKKETQGD
Sequences:
>Translated_343_residues MKNKNRLIILGMAIVVVLAIGFVSIKYYDRKILRAPLKVAENGVINVVVDKDQSLNEVIEKIDKEGKIKSKRVLKNYIKK VQAPQKVVPGEYVFSANLNAYDLLLNLKDGIYDNRPIKVTIPEGCNIDEIGNKLEKQGIIKKEDFIKSVKEYKTPSFAKE DKNRKYPLEGYLFPDTYEFFKGMQGDKIIDKMLDRFNYVIKEIEKENNIKIKDEDIDKLISMASVIEKEAEKDSERGKVA SVFYNRIDKKMKMESCATVLYALGYHKDKLYYKDLKIKSPYNTYLNMGLPIGPICSPGKSSIKAALNPEKTDYIYFVSKN DGTHFFTKNYNDFLKVKKETQGD >Mature_343_residues MKNKNRLIILGMAIVVVLAIGFVSIKYYDRKILRAPLKVAENGVINVVVDKDQSLNEVIEKIDKEGKIKSKRVLKNYIKK VQAPQKVVPGEYVFSANLNAYDLLLNLKDGIYDNRPIKVTIPEGCNIDEIGNKLEKQGIIKKEDFIKSVKEYKTPSFAKE DKNRKYPLEGYLFPDTYEFFKGMQGDKIIDKMLDRFNYVIKEIEKENNIKIKDEDIDKLISMASVIEKEAEKDSERGKVA SVFYNRIDKKMKMESCATVLYALGYHKDKLYYKDLKIKSPYNTYLNMGLPIGPICSPGKSSIKAALNPEKTDYIYFVSKN DGTHFFTKNYNDFLKVKKETQGD
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=258, Percent_Identity=32.5581395348837, Blast_Score=130, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: 4.1.3.38
Molecular weight: Translated: 39459; Mature: 39459
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKNRLIILGMAIVVVLAIGFVSIKYYDRKILRAPLKVAENGVINVVVDKDQSLNEVIE CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH KIDKEGKIKSKRVLKNYIKKVQAPQKVVPGEYVFSANLNAYDLLLNLKDGIYDNRPIKVT HHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCEEEE IPEGCNIDEIGNKLEKQGIIKKEDFIKSVKEYKTPSFAKEDKNRKYPLEGYLFPDTYEFF CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEECCCHHHHH KGMQGDKIIDKMLDRFNYVIKEIEKENNIKIKDEDIDKLISMASVIEKEAEKDSERGKVA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHH SVFYNRIDKKMKMESCATVLYALGYHKDKLYYKDLKIKSPYNTYLNMGLPIGPICSPGKS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEEECCCHHHHHCCCCCCCCCCCCCHH SIKAALNPEKTDYIYFVSKNDGTHFFTKNYNDFLKVKKETQGD HHHCCCCCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHCCCC >Mature Secondary Structure MKNKNRLIILGMAIVVVLAIGFVSIKYYDRKILRAPLKVAENGVINVVVDKDQSLNEVIE CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH KIDKEGKIKSKRVLKNYIKKVQAPQKVVPGEYVFSANLNAYDLLLNLKDGIYDNRPIKVT HHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCEEEE IPEGCNIDEIGNKLEKQGIIKKEDFIKSVKEYKTPSFAKEDKNRKYPLEGYLFPDTYEFF CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEECCCHHHHH KGMQGDKIIDKMLDRFNYVIKEIEKENNIKIKDEDIDKLISMASVIEKEAEKDSERGKVA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHH SVFYNRIDKKMKMESCATVLYALGYHKDKLYYKDLKIKSPYNTYLNMGLPIGPICSPGKS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEEECCCHHHHHCCCCCCCCCCCCCHH SIKAALNPEKTDYIYFVSKNDGTHFFTKNYNDFLKVKKETQGD HHHCCCCCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-amino-4-deoxychorismate
Specific reaction: 4-amino-4-deoxychorismate = 4-aminobenzoate + pyruvate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]